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CLPTM1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 1209 cleft lip and palate associated transmembrane protein 1 chr19 + 45453598 - 45459098 45458598 Transcription Factor Binding Sites   Download all TFBS in the CLPTM1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR - 45455008 45455026 0.0E+00 TCTCCACTAGGGGGCGCAA 19 HOXD12_homeodomain_DBD_monomeric_9_1 SELEX - 45458431 45458439 2.0E-06 CTAATAAAA 9 Hoxc10_homeodomain_DBD_monomeric_10_2 SELEX - 45458430 45458439 3.0E-06 CTAATAAAAA 10 GABPA_MA0062.2 JASPAR + 45458499 45458509 0.0E+00 CCGGAAGTGGC 11 ZNF713_C2H2_full_monomeric_17_1 SELEX + 45458260 45458276 4.0E-06 AAGAAACATGGAACGAA 17 ELF4_ETS_full_monomeric_12_1 SELEX + 45458496 45458507 4.0E-06 TAGCCGGAAGTG 12 KLF14_C2H2_DBD_monomeric_14_1 SELEX - 45458218 45458231 2.0E-06 AACCACGCCCCTCT 14 TBX5_TBX_DBD_dimeric_20_1 SELEX - 45458570 45458589 7.0E-06 TCGCGCGAGATTTCACGCTT 20 SOX8_HMG_full_dimeric_17_1 SELEX - 45454985 45455001 5.0E-06 GATCAAGGGCTGTGATT 17 ZNF232_C2H2_full_monomeric_19_1 SELEX - 45454995 45455013 8.0E-06 GCGCAAAATACTGATCAAG 19 KLF13_C2H2_full_monomeric_18_1 SELEX - 45458215 45458232 0.0E+00 GAACCACGCCCCTCTTTC 18 Klf4_MA0039.2 JASPAR + 45454473 45454482 5.0E-06 TGGGTGGGGC 10 MEOX2_homeodomain_DBD_dimeric_14_1 SELEX - 45455081 45455094 7.0E-06 AAAATCATAATAAG 14 NFKB2_NFAT_DBD_dimeric_13_1 SELEX - 45454703 45454715 9.0E-06 AGGGTCTTCCCCT 13 HOXC12_homeodomain_DBD_monomeric_9_1 SELEX - 45458431 45458439 7.0E-06 CTAATAAAA 9 ELF3_ETS_full_monomeric_13_1 SELEX + 45458496 45458508 2.0E-06 TAGCCGGAAGTGG 13 HOXD13_homeodomain_DBD_monomeric_10_1 SELEX - 45458430 45458439 1.0E-06 CTAATAAAAA 10 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX - 45455075 45455088 8.0E-06 ATAATAAGTAAAAA 14 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX + 45457788 45457801 1.0E-06 GTGAACAGTTAACA 14 SP1_MA0079.2 JASPAR - 45458628 45458637 7.0E-06 CCCCGCCCCC 10 SP4_C2H2_full_monomeric_17_1 SELEX - 45458217 45458233 6.0E-06 CGAACCACGCCCCTCTT 17 CTCF_C2H2_full_monomeric_17_1 SELEX + 45455009 45455025 0.0E+00 TGCGCCCCCTAGTGGAG 17 MGA_TBX_DBD_dimeric_18_2 SELEX + 45458571 45458588 2.0E-06 AGCGTGAAATCTCGCGCG 18 MGA_TBX_DBD_dimeric_18_2 SELEX - 45458571 45458588 1.0E-06 CGCGCGAGATTTCACGCT 18 SP1_C2H2_DBD_monomeric_11_1 SELEX - 45458220 45458230 1.0E-05 ACCACGCCCCT 11 YY2_C2H2_full_monomeric_11_1 SELEX - 45458650 45458660 4.0E-06 GCCGCCATCTT 11 HOXA13_homeodomain_full_monomeric_10_1 SELEX - 45458430 45458439 1.0E-06 CTAATAAAAA 10 Klf12_C2H2_DBD_monomeric_15_1 SELEX - 45458217 45458231 3.0E-06 AACCACGCCCCTCTT 15 EHF_ETS_full_monomeric_12_1 SELEX + 45458496 45458507 4.0E-06 TAGCCGGAAGTG 12 HOXC13_homeodomain_DBD_monomeric_10_1 SELEX - 45458430 45458439 1.0E-06 CTAATAAAAA 10 GABPA_ETS_full_monomeric_10_1 SELEX + 45458498 45458507 9.0E-06 GCCGGAAGTG 10 ELF3_ETS_DBD_monomeric_12_1 SELEX + 45458496 45458507 3.0E-06 TAGCCGGAAGTG 12 CPEB1_RRM_full_monomeric_8_1 SELEX - 45458430 45458437 4.0E-06 AATAAAAA 8 NRF1_NRF_full_dimeric_12_1 SELEX - 45457978 45457989 3.0E-06 CACGCATGCGCG 12 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 45459858 45459870 5.0E-06 AACTCAACAAACA 13 CDX2_homeodomain_DBD_monomeric_9_1 SELEX - 45458431 45458439 9.0E-06 CTAATAAAA 9 TBX1_TBX_DBD_dimeric_20_1 SELEX + 45458570 45458589 8.0E-06 AAGCGTGAAATCTCGCGCGA 20 HOXB13_homeodomain_DBD_monomeric_10_1 SELEX - 45458430 45458439 1.0E-06 CTAATAAAAA 10 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX + 45457788 45457801 8.0E-06 GTGAACAGTTAACA 14 V_FOXP1_01_M00987 TRANSFAC + 45455082 45455101 5.0E-06 TTATTATGATTTTTAATTTC 20 V_E2A_Q6_01_M02088 TRANSFAC - 45457862 45457874 2.0E-06 GGCCATCTGCTGA 13 V_STAT5A_Q6_M01890 TRANSFAC + 45454831 45454843 5.0E-06 TTCTTTCTCAGAA 13 V_HSF1_Q6_M01023 TRANSFAC - 45458398 45458414 2.0E-06 ACTCCAGGACTTTCTCG 17 V_EVI1_05_M00082 TRANSFAC - 45457721 45457731 4.0E-06 GGATAAGATAT 11 V_ATF5_01_M01295 TRANSFAC + 45454966 45454976 2.0E-06 TTTCTCCCTTA 11 V_SOX40_04_M02908 TRANSFAC - 45455080 45455095 7.0E-06 AAAAATCATAATAAGT 16 V_XPF1_Q6_M00684 TRANSFAC - 45458204 45458213 3.0E-06 TCAGAGGAAC 10 V_EVI1_04_M00081 TRANSFAC - 45457722 45457736 3.0E-06 TGACTGGATAAGATA 15 V_BCL6_01_M01183 TRANSFAC + 45455078 45455093 1.0E-06 TTACTTATTATGATTT 16 V_COE1_Q6_M01871 TRANSFAC - 45454464 45454477 7.0E-06 ACCCATGGGACTTG 14 V_SP1_Q6_01_M00931 TRANSFAC + 45458611 45458620 4.0E-06 GGGGCGGGGC 10 V_NFMUE1_Q6_M00651 TRANSFAC - 45457867 45457875 6.0E-06 CGGCCATCT 9 V_SP1_03_M02281 TRANSFAC - 45458628 45458637 7.0E-06 CCCCGCCCCC 10 V_GKLF_02_M01588 TRANSFAC - 45454471 45454482 8.0E-06 GCCCCACCCATG 12 V_NERF_Q2_M00531 TRANSFAC + 45458496 45458513 9.0E-06 TAGCCGGAAGTGGCCTTC 18 V_SP1_02_M01303 TRANSFAC + 45458629 45458639 8.0E-06 GGGGCGGGGAC 11 V_HOXD13_01_M01404 TRANSFAC - 45458427 45458442 1.0E-06 CACCTAATAAAAACAC 16 V_CEBPB_01_M00109 TRANSFAC + 45459847 45459860 8.0E-06 AGCTTAGGAAATGT 14 V_CDP_04_M01344 TRANSFAC - 45455079 45455093 7.0E-06 AAATCATAATAAGTA 15 V_WT1_Q6_01_M02036 TRANSFAC - 45458625 45458634 4.0E-06 CGCCCCCGCC 10 V_GC_01_M00255 TRANSFAC + 45458609 45458622 3.0E-06 ACGGGGCGGGGCTG 14 V_CEBPE_Q6_M01868 TRANSFAC - 45459849 45459862 6.0E-06 AAACATTTCCTAAG 14 V_OCT1_03_M00137 TRANSFAC - 45455079 45455091 1.0E-05 ATCATAATAAGTA 13 V_HOXB13_01_M01467 TRANSFAC + 45454599 45454614 6.0E-06 AGTCCAGTAAAAAACA 16 V_HOXB13_01_M01467 TRANSFAC - 45458427 45458442 0.0E+00 CACCTAATAAAAACAC 16 V_HNF3G_Q4_M02015 TRANSFAC + 45459858 45459865 7.0E-06 TGTTTGTT 8 V_GFI1_01_M00250 TRANSFAC + 45454977 45455000 1.0E-06 GAACCTGAAATCACAGCCCTTGAT 24 V_KROX_Q6_M00982 TRANSFAC - 45458623 45458636 0.0E+00 CCCGCCCCCGCCGC 14 V_OLF1_01_M00261 TRANSFAC + 45454462 45454483 1.0E-05 CCCAAGTCCCATGGGTGGGGCT 22 V_ER81_02_M02065 TRANSFAC + 45458498 45458507 1.0E-05 GCCGGAAGTG 10 V_SP1_Q6_M00196 TRANSFAC + 45458609 45458621 3.0E-06 ACGGGGCGGGGCT 13 V_EVI1_01_M00078 TRANSFAC - 45457721 45457736 1.0E-06 TGACTGGATAAGATAT 16 V_EVI1_01_M00078 TRANSFAC - 45457810 45457825 6.0E-06 AGAGAGGACAAGACTC 16 V_HNF3_Q6_M00791 TRANSFAC - 45459856 45459868 4.0E-06 CTCAACAAACATT 13 V_EGR1_Q6_M01873 TRANSFAC + 45458626 45458635 4.0E-06 GCGGGGGCGG 10 V_STAT5A_02_M00460 TRANSFAC + 45454835 45454858 9.0E-06 TTCTCAGAACCCCATTCCCCTCAG 24 V_CUX1_04_M02959 TRANSFAC - 45455079 45455093 7.0E-06 AAATCATAATAAGTA 15 V_GADP_01_M01258 TRANSFAC - 45458496 45458507 3.0E-06 CACTTCCGGCTA 12 V_NFE4_Q5_M02105 TRANSFAC - 45454621 45454632 6.0E-06 GTCCCTCTCCAG 12 V_YY1_Q6_02_M01035 TRANSFAC - 45458650 45458660 7.0E-06 GCCGCCATCTT 11 V_PAX6_Q2_M00979 TRANSFAC + 45455038 45455051 9.0E-06 CTGTCCTGTGACTT 14 V_REX1_03_M01744 TRANSFAC + 45458650 45458661 1.0E-06 AAGATGGCGGCG 12 V_HBP1_03_M02762 TRANSFAC + 45454395 45454410 9.0E-06 ACCATGAATGAAGGGG 16 V_GR_Q6_M00192 TRANSFAC - 45454666 45454684 6.0E-06 TTGGCAGCCTCTGTTCTTC 19 V_SOX12_04_M02900 TRANSFAC + 45458080 45458095 2.0E-06 AAACACAGAAAGGATA 16 V_MUSCLE_INI_B_M00321 TRANSFAC - 45458686 45458706 4.0E-06 CCCGGCCGCCACCACGGCGCT 21 V_KLF7_03_M02773 TRANSFAC - 45458218 45458233 3.0E-06 CGAACCACGCCCCTCT 16 V_NKX3A_01_M00451 TRANSFAC - 45455076 45455087 2.0E-06 TAATAAGTAAAA 12 V_STAT4_Q5_M02117 TRANSFAC - 45454834 45454843 5.0E-06 TTCTGAGAAA 10 V_SP1_01_M00008 TRANSFAC + 45458221 45458230 1.0E-05 GGGGCGTGGT 10 V_CTCF_02_M01259 TRANSFAC - 45455010 45455029 0.0E+00 TTCTCTCCACTAGGGGGCGC 20 V_CTCF_01_M01200 TRANSFAC - 45455008 45455027 1.0E-06 CTCTCCACTAGGGGGCGCAA 20 V_TFIII_Q6_M00706 TRANSFAC - 45458790 45458798 1.0E-05 AGAGGTAGG 9 V_ZNF515_01_M01231 TRANSFAC - 45454914 45454923 8.0E-06 CTGGGGGGTC 10 V_SP4_Q5_M01273 TRANSFAC - 45458610 45458620 2.0E-06 GCCCCGCCCCG 11 V_SP4_Q5_M01273 TRANSFAC - 45458628 45458638 9.0E-06 TCCCCGCCCCC 11 V_GFI1_Q6_M01067 TRANSFAC + 45454982 45454994 5.0E-06 TGAAATCACAGCC 13 V_ATF1_Q6_M00691 TRANSFAC + 45458208 45458218 8.0E-06 CTCTGACGAAA 11 V_MTF1_06_M02882 TRANSFAC - 45455074 45455087 2.0E-06 TAATAAGTAAAAAA 14 V_CREBP1_Q2_M00179 TRANSFAC - 45457701 45457712 5.0E-06 AGTGACGTCTCT 12 V_EHF_06_M02745 TRANSFAC + 45458494 45458508 8.0E-06 CATAGCCGGAAGTGG 15 V_FOXL1_02_M02857 TRANSFAC - 45455078 45455093 7.0E-06 AAATCATAATAAGTAA 16 V_PLAG1_01_M01778 TRANSFAC + 45454615 45454630 1.0E-06 GGGGCCCTGGAGAGGG 16 V_ZFP206_01_M01742 TRANSFAC + 45457978 45457988 8.0E-06 CGCGCATGCGT 11 V_RBPJK_01_M01112 TRANSFAC - 45454745 45454755 4.0E-06 TCCGTGGGAAC 11 V_NRF1_Q6_M00652 TRANSFAC - 45457978 45457987 4.0E-06 CGCATGCGCG 10 V_STAT5A_01_M00457 TRANSFAC - 45458170 45458184 7.0E-06 TGATTCGAAGAACTA 15 V_FOXJ2_01_M00422 TRANSFAC - 45459853 45459870 2.0E-06 AACTCAACAAACATTTCC 18 V_SP1_Q2_01_M00933 TRANSFAC - 45458628 45458637 4.0E-06 CCCCGCCCCC 10 V_UF1H3BETA_Q6_M01068 TRANSFAC + 45458625 45458638 5.0E-06 GGCGGGGGCGGGGA 14 V_SP1_Q4_01_M00932 TRANSFAC + 45458609 45458621 3.0E-06 ACGGGGCGGGGCT 13 V_EHF_07_M02849 TRANSFAC - 45459847 45459862 9.0E-06 AAACATTTCCTAAGCT 16 V_GFI1_Q6_01_M02010 TRANSFAC - 45454983 45454992 1.0E-06 CTGTGATTTC 10 V_EVI1_03_M00080 TRANSFAC - 45457721 45457731 9.0E-06 GGATAAGATAT 11 V_SOX14_03_M02798 TRANSFAC - 45455080 45455095 8.0E-06 AAAAATCATAATAAGT 16 V_CEBPA_Q6_M01866 TRANSFAC + 45457911 45457923 9.0E-06 AAATTGTGGAATT 13 V_NANOG_02_M01247 TRANSFAC - 45454823 45454842 7.0E-06 TCTGAGAAAGAAAGGAGGAG 20

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.