Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

FAT3 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 120114 FAT atypical cadherin 3 chr11 + 92080261 - 92085761 92085261 Transcription Factor Binding Sites   Download all TFBS in the FAT3 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints PAX6_PAX_DBD_monomeric_19_1 SELEX - 92080785 92080803 8.0E-06 TTCCATGGATGAATAAATA 19 HSF1_HSF_full_trimeric_13_1 SELEX - 92088107 92088119 5.0E-06 TTCAAGAACCTTC 13 V_HELIOSA_01_M01003 TRANSFAC + 92084373 92084383 4.0E-06 CTTAGGGATTA 11 V_BCL6_02_M01185 TRANSFAC - 92080794 92080807 9.0E-06 TTCTTTCCATGGAT 14 V_PITX1_Q6_M01826 TRANSFAC - 92084378 92084388 2.0E-06 GACAATAATCC 11 V_CRX_02_M01436 TRANSFAC + 92084372 92084387 8.0E-06 CCTTAGGGATTATTGT 16 V_PITX2_Q2_M00482 TRANSFAC - 92084375 92084385 1.0E-05 AATAATCCCTA 11 V_NFAT2_02_M01749 TRANSFAC + 92080794 92080804 3.0E-06 ATCCATGGAAA 11 V_HSF2_02_M01244 TRANSFAC + 92088107 92088119 3.0E-06 GAAGGTTCTTGAA 13 V_GSC_01_M01428 TRANSFAC - 92084373 92084389 3.0E-06 AGACAATAATCCCTAAG 17 V_OTX1_01_M01366 TRANSFAC + 92084373 92084389 8.0E-06 CTTAGGGATTATTGTCT 17

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.