Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

ADD2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 119 adducin 2 (beta) chr2 - 70994347 - 71000375 70994847 Transcription Factor Binding Sites   Download all TFBS in the ADD2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints EWSR1-FLI1_MA0149.1 JASPAR - 70994222 70994239 2.0E-06 GGGGGGAAGGGAGGGAGG 18 NFKB1_MA0105.1 JASPAR - 70995176 70995186 5.0E-06 GGGGATCTCCC 11 MEF2A_MADS_DBD_dimeric_12_1 SELEX + 70994264 70994275 1.0E-05 TTTAAAAATAAG 12 ISL2_homeodomain_DBD_monomeric_8_1 SELEX - 71000129 71000136 1.0E-05 GCACTTAA 8 Pax4_MA0068.1 JASPAR + 70994267 70994296 3.0E-06 AAAAATAAGCAGACACCGACTCCCGCCTCC 30 MEF2A_MA0052.1 JASPAR - 70994265 70994274 7.0E-06 TTATTTTTAA 10 HOXD13_homeodomain_DBD_monomeric_10_1 SELEX - 70995072 70995081 5.0E-06 CCCATAAAAT 10 Creb3l2_bZIP_DBD_dimeric_13_1 SELEX + 70994823 70994835 9.0E-06 TGCTACATCATCA 13 Gfi_MA0038.1 JASPAR - 70994258 70994267 7.0E-06 TAAATCACAC 10 SP1_C2H2_DBD_monomeric_11_1 SELEX - 70995086 70995096 7.0E-06 ACCCCACCCCC 11 HOXA13_homeodomain_full_monomeric_10_1 SELEX - 70995072 70995081 1.0E-05 CCCATAAAAT 10 Foxd3_MA0041.1 JASPAR + 70995065 70995076 9.0E-06 TTTTGTTATTTT 12 Nkx3-2_MA0122.1 JASPAR + 71000129 71000137 1.0E-05 TTAAGTGCA 9 Hoxd9_homeodomain_DBD_monomeric_9_1 SELEX - 70995073 70995081 2.0E-06 CCCATAAAA 9 HOXC13_homeodomain_DBD_monomeric_10_1 SELEX - 70995072 70995081 8.0E-06 CCCATAAAAT 10 RREB1_MA0073.1 JASPAR - 70995074 70995093 2.0E-06 CCACCCCCCAAACCCATAAA 20 ONECUT3_CUT_DBD_monomeric_14_1 SELEX + 70994432 70994445 1.0E-05 ATAAAATCAAAACC 14 HOXB13_homeodomain_DBD_monomeric_10_1 SELEX - 70995072 70995081 4.0E-06 CCCATAAAAT 10 Zfx_MA0146.1 JASPAR - 70995396 70995409 8.0E-06 GCCGGCGCGGCCTG 14 V_HOXA9_01_M01351 TRANSFAC - 70995068 70995084 3.0E-06 AAACCCATAAAATAACA 17 V_TCF3_01_M01594 TRANSFAC + 70995064 70995076 1.0E-06 GTTTTGTTATTTT 13 V_DEC2_Q2_M01843 TRANSFAC + 70994456 70994465 9.0E-06 GCTCACGTGC 10 V_NRSF_Q4_M01028 TRANSFAC + 70995137 70995155 1.0E-06 TTTCTGCCCATGCTGCAGC 19 V_ZFX_01_M01593 TRANSFAC + 70995393 70995408 1.0E-06 CAGCAGGCCGCGCCGG 16 V_FOXD3_01_M00130 TRANSFAC + 70995065 70995076 9.0E-06 TTTTGTTATTTT 12 V_SATB1_Q3_M01723 TRANSFAC + 70995291 70995306 8.0E-06 AGAATTAAAGCCATTT 16 V_FOXJ1_04_M02854 TRANSFAC - 70995064 70995078 3.0E-06 ATAAAATAACAAAAC 15 V_MEF2_02_M00231 TRANSFAC + 70994258 70994279 7.0E-06 GTGTGATTTAAAAATAAGCAGA 22 V_ZFP740_03_M02834 TRANSFAC - 70995080 70995095 8.0E-06 CCCCACCCCCCAAACC 16 V_GABPA_04_M02858 TRANSFAC - 70994350 70994365 1.0E-06 CCATCTTCCCTCTCCT 16 V_AREB6_04_M00415 TRANSFAC - 70994366 70994374 8.0E-06 CTGTTTCTT 9 V_NKX24_01_M01350 TRANSFAC - 71000125 71000140 8.0E-06 TAGTGCACTTAACATC 16 V_SP1_02_M01303 TRANSFAC + 70995087 70995097 5.0E-06 GGGGTGGGGTG 11 V_HOXD13_01_M01404 TRANSFAC - 70995069 70995084 3.0E-06 AAACCCATAAAATAAC 16 V_MEF2A_Q6_M02024 TRANSFAC - 70994264 70994273 1.0E-06 TATTTTTAAA 10 V_NRSE_B_M00325 TRANSFAC - 70995412 70995432 8.0E-06 TGCAGCACCGCGGCCCTCGGG 21 V_WT1_Q6_01_M02036 TRANSFAC + 70995527 70995536 4.0E-06 CGCCCCCGCC 10 V_FOXA2_02_M02853 TRANSFAC - 70995063 70995077 0.0E+00 TAAAATAACAAAACC 15 V_ZFP105_03_M02827 TRANSFAC - 70995064 70995078 3.0E-06 ATAAAATAACAAAAC 15 V_BEL1_B_M00312 TRANSFAC - 70994254 70994281 3.0E-06 TGTCTGCTTATTTTTAAATCACACCACA 28 V_HOXB13_01_M01467 TRANSFAC - 70995069 70995084 0.0E+00 AAACCCATAAAATAAC 16 V_NKX26_01_M01322 TRANSFAC - 71000125 71000140 2.0E-06 TAGTGCACTTAACATC 16 V_RSRFC4_Q2_M00407 TRANSFAC + 70994262 70994278 4.0E-06 GATTTAAAAATAAGCAG 17 V_IRX4_01_M01410 TRANSFAC + 71000083 71000099 4.0E-06 TGATAACATGTAAGTCC 17 V_HOXB9_01_M01426 TRANSFAC - 70995069 70995084 1.0E-06 AAACCCATAAAATAAC 16 V_FOXK1_04_M02856 TRANSFAC - 70995062 70995076 4.0E-06 AAAATAACAAAACCA 15 V_FOXK1_04_M02856 TRANSFAC - 70995065 70995079 3.0E-06 CATAAAATAACAAAA 15 V_MAZ_Q6_01_M02023 TRANSFAC - 70994220 70994233 9.0E-06 AAGGGAGGGAGGGG 14 V_MAZ_Q6_01_M02023 TRANSFAC - 70994225 70994238 9.0E-06 GGGGGAAGGGAGGG 14 V_MAZ_Q6_01_M02023 TRANSFAC - 70995573 70995586 7.0E-06 GGGGGTGGAAGGGG 14 V_MEF2_Q6_01_M00941 TRANSFAC - 70994265 70994276 1.0E-06 GCTTATTTTTAA 12 V_ISGF3G_03_M02771 TRANSFAC + 70994433 70994447 3.0E-06 TAAAATCAAAACCCA 15 V_ISGF3G_03_M02771 TRANSFAC - 70995061 70995075 5.0E-06 AAATAACAAAACCAA 15 V_SMAD4_Q6_M00733 TRANSFAC - 70994211 70994225 9.0E-06 GAGGGGCAGACTGCT 15 V_IRX3_01_M01318 TRANSFAC + 71000083 71000099 6.0E-06 TGATAACATGTAAGTCC 17 V_IRX5_01_M01472 TRANSFAC + 71000083 71000099 1.0E-05 TGATAACATGTAAGTCC 17 V_NKX32_02_M01482 TRANSFAC - 71000125 71000141 6.0E-06 CTAGTGCACTTAACATC 17 V_HOXD9_Q2_M01834 TRANSFAC - 70995073 70995082 2.0E-06 ACCCATAAAA 10 V_IRX3_02_M01485 TRANSFAC + 71000083 71000099 3.0E-06 TGATAACATGTAAGTCC 17 V_GATA1_05_M00346 TRANSFAC + 71000081 71000090 5.0E-06 CCTGATAACA 10 V_MTF1_06_M02882 TRANSFAC - 70995062 70995075 9.0E-06 AAATAACAAAACCA 14 V_NKX25_03_M01414 TRANSFAC - 71000125 71000140 5.0E-06 TAGTGCACTTAACATC 16 V_MYF6_04_M02885 TRANSFAC + 70994897 70994911 0.0E+00 GGCAACAGACGCGCC 15 V_MYF6_04_M02885 TRANSFAC - 70995628 70995642 7.0E-06 AGTAACAGACTCCCC 15 V_STRA13_01_M00985 TRANSFAC - 70994455 70994468 6.0E-06 CCGGCACGTGAGCG 14 V_CNOT3_01_M01253 TRANSFAC + 70995398 70995407 4.0E-06 GGCCGCGCCG 10 V_FOXL1_02_M02857 TRANSFAC - 70995063 70995078 3.0E-06 ATAAAATAACAAAACC 16 V_EBNA1_01_M01745 TRANSFAC - 70995129 70995144 8.0E-06 GGCAGAAAACGCTGCC 16 V_PLAG1_01_M01778 TRANSFAC - 70995487 70995502 5.0E-06 GGGGCGGTAGTGGGGG 16 V_GFI1B_01_M01058 TRANSFAC - 70994256 70994267 2.0E-06 TAAATCACACCA 12 V_STAT6_02_M00500 TRANSFAC + 70994803 70994810 1.0E-05 GATTTCCT 8 V_RSRFC4_01_M00026 TRANSFAC - 70994262 70994277 4.0E-06 TGCTTATTTTTAAATC 16 V_ETS1_B_M00339 TRANSFAC + 70995321 70995335 9.0E-06 GGAGGAAATGAGAGC 15 V_ZFP281_01_M01597 TRANSFAC + 70995085 70995095 4.0E-06 GGGGGGTGGGG 11 V_IRX2_01_M01405 TRANSFAC + 71000083 71000099 7.0E-06 TGATAACATGTAAGTCC 17 V_SOX14_04_M02901 TRANSFAC - 70995104 70995120 7.0E-06 TAGCTGGGTGGATTTTT 17 V_ZFP281_04_M02831 TRANSFAC - 70995082 70995096 8.0E-06 ACCCCACCCCCCAAA 15 V_EWSR1FLI1_01_M02252 TRANSFAC - 70994222 70994239 2.0E-06 GGGGGGAAGGGAGGGAGG 18 V_IRF1_01_M00062 TRANSFAC + 70994433 70994445 4.0E-06 TAAAATCAAAACC 13 V_RFX3_04_M02788 TRANSFAC - 70995630 70995652 2.0E-06 TTTTCTCCCTAGTAACAGACTCC 23 V_MEF2A_05_M01301 TRANSFAC - 70994265 70994276 1.0E-06 GCTTATTTTTAA 12 V_HOXD10_01_M01375 TRANSFAC - 70995068 70995084 8.0E-06 AAACCCATAAAATAACA 17 V_PAX4_04_M00380 TRANSFAC + 70994267 70994296 5.0E-06 AAAAATAAGCAGACACCGACTCCCGCCTCC 30 V_SMAD1_01_M01590 TRANSFAC - 70995063 70995074 1.0E-05 AATAACAAAACC 12 V_NANOG_02_M01247 TRANSFAC - 70995059 70995078 0.0E+00 ATAAAATAACAAAACCAACC 20

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.