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CLCA1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 1179 chloride channel accessory 1 chr1 + 86929525 - 86935025 86934525 Transcription Factor Binding Sites   Download all TFBS in the CLCA1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints POU2F1_POU_DBD_dimeric_14_1 SELEX + 86937106 86937119 6.0E-06 TCTAAATATGTATT 14 POU2F1_POU_DBD_dimeric_14_1 SELEX - 86937106 86937119 5.0E-06 AATACATATTTAGA 14 PDX1_homeodomain_DBD_dimeric_18_1 SELEX + 86932246 86932263 9.0E-06 GCAATTTATTTCAATAAC 18 TFAP2B_TFAP_DBD_dimeric_11_1 SELEX - 86932984 86932994 4.0E-06 AGCCTAAGGCA 11 Lhx8_homeodomain_DBD_dimeric_12_1 SELEX + 86932287 86932298 7.0E-06 AGATTGCAATTG 12 Lhx8_homeodomain_DBD_dimeric_12_1 SELEX - 86932287 86932298 6.0E-06 CAATTGCAATCT 12 TBP_MA0108.2 JASPAR + 86930625 86930639 1.0E-05 ATATAAAAAGGTCTT 15 POU1F1_POU_DBD_monomeric_14_1 SELEX + 86930661 86930674 1.0E-06 AAAATGCAAATCAA 14 RARA_nuclearreceptor_DBD_dimeric_18_2 SELEX - 86932257 86932274 5.0E-06 AAGGCAAGAAGGTTATTG 18 TFAP2A_TFAP_DBD_dimeric_11_1 SELEX - 86932984 86932994 9.0E-06 AGCCTAAGGCA 11 POU3F4_POU_DBD_monomeric_9_1 SELEX + 86930663 86930671 7.0E-06 AATGCAAAT 9 RORA_nuclearreceptor_DBD_dimeric_19_1 SELEX + 86937115 86937133 5.0E-06 GTATTAGGATATGAGGTCA 19 THRB_nuclearreceptor_DBD_dimeric_18_1 SELEX + 86931036 86931053 1.0E-05 CTGACTTGATAGGGTTAT 18 RUNX3_RUNX_full_monomeric_10_1 SELEX + 86930674 86930683 1.0E-05 AAACCACAGA 10 LEF1_HMG_DBD_monomeric_15_1 SELEX + 86931005 86931019 7.0E-06 AAACATCAAGGATAA 15 POU3F3_POU_DBD_monomeric_13_1 SELEX + 86930661 86930673 4.0E-06 AAAATGCAAATCA 13 POU6F2_POU_DBD_dimeric_16_1 SELEX - 86930627 86930642 8.0E-06 TTAAAGACCTTTTTAT 16 HNF1A_homeodomain_full_dimeric_15_1 SELEX + 86932321 86932335 1.0E-06 TGTAAATGATTAAAC 15 HNF1A_homeodomain_full_dimeric_15_1 SELEX - 86932321 86932335 1.0E-06 GTTTAATCATTTACA 15 POU2F3_POU_DBD_dimeric_12_1 SELEX + 86937107 86937118 9.0E-06 CTAAATATGTAT 12 znf143_MA0088.1 JASPAR + 86932897 86932916 2.0E-06 TGCTTCCCAGCCTTCCCTGA 20 NFATC1_NFAT_full_dimeric_20_1 SELEX + 86937241 86937260 2.0E-06 ATTGGAAATTCACATTTCAC 20 NFATC1_NFAT_full_dimeric_20_1 SELEX - 86937242 86937261 4.0E-06 TGTGAAATGTGAATTTCCAA 20 SOX7_HMG_full_dimeric_16_1 SELEX - 86937169 86937184 7.0E-06 AACAATAATAAGGGAT 16 HNF1B_homeodomain_full_dimeric_13_1 SELEX + 86932322 86932334 0.0E+00 GTAAATGATTAAA 13 HNF1B_homeodomain_full_dimeric_13_1 SELEX - 86932322 86932334 1.0E-06 TTTAATCATTTAC 13 POU3F1_POU_DBD_monomeric_12_1 SELEX + 86930662 86930673 5.0E-06 AAATGCAAATCA 12 TFAP2C_TFAP_full_dimeric_11_1 SELEX - 86932984 86932994 3.0E-06 AGCCTAAGGCA 11 POU2F1_POU_DBD_monomeric_12_1 SELEX + 86930661 86930672 6.0E-06 AAAATGCAAATC 12 NR3C1_MA0113.1 JASPAR - 86937216 86937233 2.0E-06 AGGAAGAATAAGTACCAT 18 RUNX1_MA0002.2 JASPAR - 86930674 86930684 0.0E+00 TTCTGTGGTTT 11 IRF3_IRF_full_trimeric_21_1 SELEX + 86930659 86930679 6.0E-06 GGAAAATGCAAATCAAAACCA 21 HNF1B_homeodomain_full_dimeric_15_1 SELEX + 86932321 86932335 1.0E-06 TGTAAATGATTAAAC 15 HNF1B_homeodomain_full_dimeric_15_1 SELEX - 86932321 86932335 1.0E-06 GTTTAATCATTTACA 15 POU3F2_POU_DBD_monomeric_12_1 SELEX + 86930662 86930673 5.0E-06 AAATGCAAATCA 12 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 86930621 86930633 5.0E-06 ATGTATATAAAAA 13 HNF1A_MA0046.1 JASPAR + 86932321 86932334 5.0E-06 TGTAAATGATTAAA 14 V_TCF3_01_M01594 TRANSFAC - 86930665 86930677 4.0E-06 GTTTTGATTTGCA 13 V_APOLYA_B_M00310 TRANSFAC - 86930629 86930643 5.0E-06 GTTAAAGACCTTTTT 15 V_MEQCJUN_02_M02048 TRANSFAC + 86937124 86937134 7.0E-06 TATGAGGTCAT 11 V_EBF_Q6_M00977 TRANSFAC - 86932346 86932356 3.0E-06 TTCCCCTGAGA 11 V_SRY_07_M02813 TRANSFAC + 86937184 86937199 8.0E-06 TTCTATTACAATGTGG 16 V_FOXA2_04_M02749 TRANSFAC + 86930618 86930634 4.0E-06 AATATGTATATAAAAAG 17 V_COE1_Q6_M01871 TRANSFAC + 86932346 86932359 8.0E-06 TCTCAGGGGAAAAG 14 V_OCT1_Q5_01_M00930 TRANSFAC - 86930663 86930673 0.0E+00 TGATTTGCATT 11 V_ISL2_01_M01328 TRANSFAC + 86937165 86937180 1.0E-05 AAAGATCCCTTATTAT 16 V_POU2F3_01_M01476 TRANSFAC + 86930660 86930675 2.0E-06 GAAAATGCAAATCAAA 16 V_OCT_C_M00210 TRANSFAC - 86930662 86930674 1.0E-06 TTGATTTGCATTT 13 V_PU1_Q4_M01172 TRANSFAC + 86932913 86932931 4.0E-06 CTGACTCATTTCCCCATTC 19 V_BRN2_01_M00145 TRANSFAC + 86937238 86937253 7.0E-06 GACATTGGAAATTCAC 16 V_NR3C1_01_M02219 TRANSFAC - 86937216 86937233 2.0E-06 AGGAAGAATAAGTACCAT 18 V_TCFAP2E_04_M02926 TRANSFAC - 86937178 86937191 7.0E-06 TAATAGAAACAATA 14 V_HELIOSA_01_M01003 TRANSFAC + 86930654 86930664 3.0E-06 ATTAGGGAAAA 11 V_CEBPB_01_M00109 TRANSFAC - 86937252 86937265 4.0E-06 GACTTGTGAAATGT 14 V_REX1_01_M01695 TRANSFAC + 86930648 86930657 4.0E-06 TTAGCCATTA 10 V_LXRB_RXRA_Q5_M02021 TRANSFAC + 86930974 86930988 2.0E-06 TGGGGTCAGTGGATG 15 V_SOX13_03_M02797 TRANSFAC - 86937174 86937189 1.0E-06 ATAGAAACAATAATAA 16 V_SOX7_03_M02807 TRANSFAC - 86937170 86937191 5.0E-06 TAATAGAAACAATAATAAGGGA 22 V_ZFP105_03_M02827 TRANSFAC - 86937174 86937188 5.0E-06 TAGAAACAATAATAA 15 V_CART1_01_M00416 TRANSFAC + 86932248 86932265 5.0E-06 AATTTATTTCAATAACCT 18 V_RUNX1_01_M02257 TRANSFAC - 86930674 86930684 0.0E+00 TTCTGTGGTTT 11 V_HNF1_Q6_M00790 TRANSFAC - 86932319 86932336 0.0E+00 AGTTTAATCATTTACAGA 18 V_TATA_01_M00252 TRANSFAC + 86930625 86930639 1.0E-05 ATATAAAAAGGTCTT 15 V_DOBOX4_01_M01359 TRANSFAC + 86937162 86937178 4.0E-06 AACAAAGATCCCTTATT 17 V_RXRA_04_M02895 TRANSFAC - 86932256 86932271 9.0E-06 GCAAGAAGGTTATTGA 16 V_SOX_Q6_M01014 TRANSFAC - 86937158 86937170 2.0E-06 ATCTTTGTTTTGG 13 V_LEF1_03_M02878 TRANSFAC - 86932323 86932338 9.0E-06 CAAGTTTAATCATTTA 16 V_HNF1_Q6_01_M01011 TRANSFAC + 86932318 86932338 0.0E+00 TTCTGTAAATGATTAAACTTG 21 V_SOX18_03_M02801 TRANSFAC + 86937175 86937190 3.0E-06 TATTATTGTTTCTATT 16 V_HOX13_01_M00023 TRANSFAC + 86937163 86937192 6.0E-06 ACAAAGATCCCTTATTATTGTTTCTATTAC 30 V_OCT1_04_M00138 TRANSFAC + 86930613 86930635 5.0E-06 AGACCAATATGTATATAAAAAGG 23 V_OCT1_04_M00138 TRANSFAC + 86930656 86930678 2.0E-06 TAGGGAAAATGCAAATCAAAACC 23 V_AP1_C_M00199 TRANSFAC - 86932913 86932921 3.0E-06 ATGAGTCAG 9 V_OCAB_Q6_M02113 TRANSFAC + 86930662 86930672 0.0E+00 AAATGCAAATC 11 V_TBP_06_M02814 TRANSFAC - 86930620 86930635 0.0E+00 CCTTTTTATATACATA 16 V_OCT1_B_M00342 TRANSFAC + 86930663 86930672 2.0E-06 AATGCAAATC 10 V_OCT_Q6_M00795 TRANSFAC - 86930663 86930673 1.0E-06 TGATTTGCATT 11 V_FOXO1_Q5_M01216 TRANSFAC + 86937159 86937167 8.0E-06 CAAAACAAA 9 V_KAISO_01_M01119 TRANSFAC - 86931129 86931138 2.0E-06 ATCCTGCTAA 10 V_ZFP105_04_M02931 TRANSFAC + 86932251 86932267 3.0E-06 TTATTTCAATAACCTTC 17 V_VJUN_01_M00036 TRANSFAC - 86937122 86937137 9.0E-06 AAAATGACCTCATATC 16 V_ZIC2_05_M02940 TRANSFAC - 86932846 86932860 7.0E-06 ACACCCAGCAGGCCA 15 V_RARA_04_M02891 TRANSFAC + 86930970 86930985 9.0E-06 AGGGTGGGGTCAGTGG 16 V_LEF1_Q2_01_M01022 TRANSFAC - 86932304 86932313 8.0E-06 CTTCAAAGTG 10 V_MYOD_Q6_01_M00929 TRANSFAC + 86937146 86937163 2.0E-06 CTGAAACAGATGCCAAAA 18 V_OCT2_01_M01368 TRANSFAC + 86930617 86930632 4.0E-06 CAATATGTATATAAAA 16 V_OCT2_01_M01368 TRANSFAC + 86930660 86930675 1.0E-06 GAAAATGCAAATCAAA 16 V_HNF1_01_M00132 TRANSFAC + 86932321 86932335 2.0E-06 TGTAAATGATTAAAC 15 V_FOXL1_02_M02857 TRANSFAC + 86937155 86937170 7.0E-06 ATGCCAAAACAAAGAT 16 V_OCT1_Q6_M00195 TRANSFAC + 86930660 86930674 0.0E+00 GAAAATGCAAATCAA 15 V_FOXL1_04_M02753 TRANSFAC + 86930618 86930634 5.0E-06 AATATGTATATAAAAAG 17 V_FOXJ3_06_M02855 TRANSFAC + 86937154 86937170 0.0E+00 GATGCCAAAACAAAGAT 17 V_PXR_Q2_M00964 TRANSFAC - 86932255 86932266 3.0E-06 AAGGTTATTGAA 12 V_TCF7_04_M02921 TRANSFAC - 86930621 86930635 7.0E-06 CCTTTTTATATACAT 15 V_TCF7_04_M02921 TRANSFAC - 86937180 86937194 2.0E-06 TTGTAATAGAAACAA 15 V_TCF7L2_04_M02922 TRANSFAC - 86932323 86932338 6.0E-06 CAAGTTTAATCATTTA 16 V_SMAD3_03_M02794 TRANSFAC - 86931019 86931035 1.0E-05 TTTAGCCAGACATTCCT 17 V_NRF2_Q4_M00821 TRANSFAC - 86931123 86931135 2.0E-06 CTGCTAAGTCAGT 13 V_PLZF_02_M01075 TRANSFAC - 86930625 86930653 7.0E-06 GGCTAATGTTGTTAAAGACCTTTTTATAT 29 V_SMAD_Q6_01_M00974 TRANSFAC - 86931023 86931033 1.0E-06 TAGCCAGACAT 11 V_SOX8_03_M02808 TRANSFAC + 86937173 86937189 4.0E-06 CTTATTATTGTTTCTAT 17 V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC - 86930674 86930681 1.0E-05 TGTGGTTT 8 V_HNF1A_Q5_M02013 TRANSFAC - 86932325 86932335 8.0E-06 GTTTAATCATT 11 V_SOX2_Q6_M01272 TRANSFAC - 86937158 86937173 9.0E-06 GGGATCTTTGTTTTGG 16 V_SOX12_03_M02796 TRANSFAC + 86937177 86937190 3.0E-06 TTATTGTTTCTATT 14 V_SRY_05_M02917 TRANSFAC - 86937174 86937190 8.0E-06 AATAGAAACAATAATAA 17 V_HOXA10_01_M01464 TRANSFAC - 86932245 86932260 5.0E-06 ATTGAAATAAATTGCA 16 V_AP2ALPHA_03_M01047 TRANSFAC + 86932982 86932996 9.0E-06 CCTGCCTTAGGCTCT 15 V_AP2ALPHA_03_M01047 TRANSFAC - 86932982 86932996 9.0E-06 AGAGCCTAAGGCAGG 15 V_TAACC_B_M00331 TRANSFAC + 86930662 86930684 4.0E-06 AAATGCAAATCAAAACCACAGAA 23 V_HNF1A_01_M02162 TRANSFAC + 86932321 86932334 5.0E-06 TGTAAATGATTAAA 14 V_GLIS2_04_M02863 TRANSFAC - 86930636 86930649 5.0E-06 AATGTTGTTAAAGA 14 V_FOXK1_03_M02752 TRANSFAC + 86930618 86930634 3.0E-06 AATATGTATATAAAAAG 17 V_PAX4_04_M00380 TRANSFAC - 86937110 86937139 2.0E-06 AGAAAATGACCTCATATCCTAATACATATT 30 V_SMAD1_01_M01590 TRANSFAC + 86937159 86937170 1.0E-05 CAAAACAAAGAT 12 V_PAX2_02_M00486 TRANSFAC + 86932953 86932961 3.0E-06 ATTAAACTC 9 V_DMRT5_01_M01150 TRANSFAC + 86937178 86937192 9.0E-06 TATTGTTTCTATTAC 15 V_ZIC1_05_M02939 TRANSFAC - 86932846 86932860 9.0E-06 ACACCCAGCAGGCCA 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.