Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

CATSPER2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 117155 chr15 + 43936039 - 43946039 0 Transcription Factor Binding Sites   Download all TFBS in the CATSPER2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SPIC_ETS_full_monomeric_14_1 SELEX - 43939216 43939229 3.0E-06 TGAAAGAGGAAGTG 14 SPIB_ETS_DBD_monomeric_14_1 SELEX - 43939216 43939229 0.0E+00 TGAAAGAGGAAGTG 14 SPI1_ETS_full_monomeric_14_1 SELEX - 43939216 43939229 1.0E-06 TGAAAGAGGAAGTG 14 RORA_1_MA0071.1 JASPAR + 43939230 43939239 8.0E-06 TACAAGGTCA 10 V_SPI1_01_M01203 TRANSFAC - 43939213 43939229 1.0E-06 TGAAAGAGGAAGTGAGG 17 V_ERR3_Q2_01_M02094 TRANSFAC + 43939229 43939241 2.0E-06 ATACAAGGTCAGT 13 V_PU1_Q4_M01172 TRANSFAC + 43939210 43939228 0.0E+00 CGGCCTCACTTCCTCTTTC 19 V_SPI1_03_M02078 TRANSFAC - 43939216 43939225 1.0E-06 AGAGGAAGTG 10 V_SPIB_01_M01204 TRANSFAC - 43939213 43939229 7.0E-06 TGAAAGAGGAAGTGAGG 17 V_SOX17_04_M02904 TRANSFAC + 43939219 43939235 8.0E-06 TTCCTCTTTCATACAAG 17 V_ELF1_Q6_M00746 TRANSFAC - 43939217 43939228 0.0E+00 GAAAGAGGAAGT 12 V_GABPBETA_Q3_M01876 TRANSFAC - 43939215 43939225 2.0E-06 AGAGGAAGTGA 11 V_SPIC_02_M02077 TRANSFAC - 43939216 43939225 3.0E-06 AGAGGAAGTG 10 V_ETS1_B_M00339 TRANSFAC - 43939211 43939225 3.0E-06 AGAGGAAGTGAGGCC 15 V_BHLHB2_04_M02845 TRANSFAC + 43939182 43939204 6.0E-06 TAGGATTACACGTGTGAGCCGGC 23 V_SPIB_03_M02076 TRANSFAC - 43939216 43939225 3.0E-06 AGAGGAAGTG 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.