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TSR3 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 115939 TSR3, 20S rRNA accumulation, homolog (S. cerevisiae) chr16 - 1401373 - 1406873 1401873 Transcription Factor Binding Sites   Download all TFBS in the TSR3 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints GABPA_MA0062.2 JASPAR - 1401899 1401909 0.0E+00 CCGGAAGTGGC 11 FLI1_ETS_full_monomeric_10_1 SELEX - 1401901 1401910 2.0E-06 ACCGGAAGTG 10 ETV5_ETS_DBD_monomeric_10_1 SELEX - 1401901 1401910 3.0E-06 ACCGGAAGTG 10 ERG_ETS_full_monomeric_10_1 SELEX - 1401901 1401910 1.0E-06 ACCGGAAGTG 10 ETV3_ETS_DBD_monomeric_10_1 SELEX - 1401901 1401910 1.0E-06 ACCGGAAGTG 10 FEV_ETS_DBD_monomeric_10_1 SELEX - 1401901 1401910 2.0E-06 ACCGGAAGTG 10 Bhlhb2_bHLH_DBD_dimeric_10_1 SELEX + 1401918 1401927 2.0E-06 GTCACGTGAC 10 Bhlhb2_bHLH_DBD_dimeric_10_1 SELEX - 1401918 1401927 2.0E-06 GTCACGTGAC 10 ETV1_ETS_DBD_monomeric_10_1 SELEX - 1401901 1401910 2.0E-06 ACCGGAAGTG 10 NFKB1_MA0105.1 JASPAR - 1401825 1401835 8.0E-06 GGGGAGTCCCC 11 USF1_bHLH_DBD_dimeric_10_1 SELEX + 1401918 1401927 3.0E-06 GTCACGTGAC 10 USF1_bHLH_DBD_dimeric_10_1 SELEX - 1401918 1401927 3.0E-06 GTCACGTGAC 10 ETV2_ETS_DBD_monomeric_11_1 SELEX - 1401901 1401911 1.0E-05 GACCGGAAGTG 11 BHLHE41_bHLH_full_dimeric_10_1 SELEX + 1401918 1401927 1.0E-06 GTCACGTGAC 10 BHLHE41_bHLH_full_dimeric_10_1 SELEX - 1401918 1401927 1.0E-06 GTCACGTGAC 10 ETS1_ETS_full_monomeric_10_1 SELEX - 1401901 1401910 3.0E-06 ACCGGAAGTG 10 SREBF2_bHLH_DBD_dimeric_10_1 SELEX + 1401918 1401927 3.0E-06 GTCACGTGAC 10 SREBF2_bHLH_DBD_dimeric_10_1 SELEX - 1401918 1401927 3.0E-06 GTCACGTGAC 10 Bhlhb2_bHLH_DBD_monomeric_10_1 SELEX + 1401918 1401927 3.0E-06 GTCACGTGAC 10 Bhlhb2_bHLH_DBD_monomeric_10_1 SELEX - 1401918 1401927 3.0E-06 GTCACGTGAC 10 ETV4_ETS_DBD_monomeric_10_1 SELEX - 1401901 1401910 4.0E-06 ACCGGAAGTG 10 ELK4_ETS_DBD_monomeric_10_1 SELEX - 1401901 1401910 2.0E-06 ACCGGAAGTG 10 ELK4_MA0076.1 JASPAR - 1401902 1401910 4.0E-06 ACCGGAAGT 9 Srebf1_bHLH_DBD_dimeric_10_1 SELEX + 1401918 1401927 3.0E-06 GTCACGTGAC 10 Srebf1_bHLH_DBD_dimeric_10_1 SELEX - 1401918 1401927 3.0E-06 GTCACGTGAC 10 TFEB_bHLH_full_dimeric_10_1 SELEX + 1401918 1401927 3.0E-06 GTCACGTGAC 10 TFEB_bHLH_full_dimeric_10_1 SELEX - 1401918 1401927 3.0E-06 GTCACGTGAC 10 ERF_ETS_DBD_monomeric_10_1 SELEX - 1401901 1401910 1.0E-06 ACCGGAAGTG 10 MLXIPL_bHLH_full_dimeric_10_1 SELEX - 1401934 1401943 9.0E-06 GTCACGTGAA 10 ELK1_ETS_full_monomeric_10_1 SELEX - 1401901 1401910 2.0E-06 ACCGGAAGTG 10 TFE3_bHLH_DBD_dimeric_10_1 SELEX + 1401918 1401927 4.0E-06 GTCACGTGAC 10 TFE3_bHLH_DBD_dimeric_10_1 SELEX - 1401918 1401927 4.0E-06 GTCACGTGAC 10 TFEC_bHLH_DBD_dimeric_10_1 SELEX + 1401918 1401927 8.0E-06 GTCACGTGAC 10 TFEC_bHLH_DBD_dimeric_10_1 SELEX - 1401918 1401927 8.0E-06 GTCACGTGAC 10 GABPA_ETS_full_monomeric_10_1 SELEX - 1401901 1401910 2.0E-06 ACCGGAAGTG 10 Elk3_ETS_DBD_monomeric_10_1 SELEX - 1401901 1401910 2.0E-06 ACCGGAAGTG 10 ETV6_ETS_full_monomeric_10_1 SELEX - 1401901 1401910 3.0E-06 ACCGGAAGTG 10 ETV6_ETS_full_dimeric_15_1 SELEX - 1401901 1401915 7.0E-06 CGGGGACCGGAAGTG 15 MLX_bHLH_full_dimeric_10_1 SELEX + 1401918 1401927 5.0E-06 GTCACGTGAC 10 MLX_bHLH_full_dimeric_10_1 SELEX - 1401918 1401927 5.0E-06 GTCACGTGAC 10 MLX_bHLH_full_dimeric_10_1 SELEX + 1401934 1401943 9.0E-06 TTCACGTGAC 10 ARNTL_bHLH_DBD_dimeric_10_1 SELEX - 1401918 1401927 1.0E-06 GTCACGTGAC 10 ARNTL_bHLH_DBD_dimeric_10_1 SELEX + 1401934 1401943 8.0E-06 TTCACGTGAC 10 ARNTL_bHLH_DBD_dimeric_10_1 SELEX - 1401934 1401943 6.0E-06 GTCACGTGAA 10 BHLHB3_bHLH_full_dimeric_10_1 SELEX + 1401918 1401927 2.0E-06 GTCACGTGAC 10 BHLHB3_bHLH_full_dimeric_10_1 SELEX - 1401918 1401927 2.0E-06 GTCACGTGAC 10 V_ERG_03_M02062 TRANSFAC - 1401901 1401910 2.0E-06 ACCGGAAGTG 10 V_AP2ALPHA_Q6_M01857 TRANSFAC + 1401770 1401780 6.0E-06 CGCCCCCGGCC 11 V_ERM_01_M01992 TRANSFAC - 1401901 1401910 3.0E-06 ACCGGAAGTG 10 V_NFKB_C_M00208 TRANSFAC + 1401825 1401836 3.0E-06 GGGGACTCCCCA 12 V_SAP1A_01_M01167 TRANSFAC - 1401901 1401911 3.0E-06 GACCGGAAGTG 11 V_ELK1_04_M01165 TRANSFAC - 1401901 1401911 1.0E-06 GACCGGAAGTG 11 V_USF_Q6_M00187 TRANSFAC + 1401918 1401927 4.0E-06 GTCACGTGAC 10 V_USF_Q6_M00187 TRANSFAC - 1401918 1401927 4.0E-06 GTCACGTGAC 10 V_GABPA_02_M02074 TRANSFAC - 1401901 1401910 8.0E-06 ACCGGAAGTG 10 V_ARNT_02_M00539 TRANSFAC + 1401913 1401932 1.0E-06 CCGTGGTCACGTGACCGTCA 20 V_ARNT_02_M00539 TRANSFAC - 1401913 1401932 1.0E-06 TGACGGTCACGTGACCACGG 20 V_CETS1_01_M01986 TRANSFAC - 1401901 1401910 4.0E-06 ACCGGAAGTG 10 V_ETV3_01_M01990 TRANSFAC - 1401901 1401910 3.0E-06 ACCGGAAGTG 10 V_GABP_B_M00341 TRANSFAC - 1401899 1401910 9.0E-06 ACCGGAAGTGGC 12 V_ARNT_01_M00236 TRANSFAC + 1401915 1401930 1.0E-06 GTGGTCACGTGACCGT 16 V_SP1_02_M01303 TRANSFAC - 1401830 1401840 5.0E-06 GGGGTGGGGAG 11 V_CETS2_02_M02064 TRANSFAC - 1401901 1401910 6.0E-06 ACCGGAAGTG 10 V_PEA3_01_M01991 TRANSFAC - 1401901 1401910 2.0E-06 ACCGGAAGTG 10 V_FLI1_01_M02038 TRANSFAC - 1401901 1401910 2.0E-06 ACCGGAAGTG 10 V_ELK1_06_M02059 TRANSFAC - 1401901 1401910 3.0E-06 ACCGGAAGTG 10 V_ELK1_05_M01981 TRANSFAC - 1401901 1401910 5.0E-06 ACCGGAAGTG 10 V_SAP1A_02_M01983 TRANSFAC - 1401901 1401910 3.0E-06 ACCGGAAGTG 10 V_FLI1_02_M02073 TRANSFAC - 1401901 1401910 5.0E-06 ACCGGAAGTG 10 V_SREBP1_01_M00220 TRANSFAC + 1401917 1401927 5.0E-06 GGTCACGTGAC 11 V_SREBP1_01_M00220 TRANSFAC - 1401918 1401928 5.0E-06 GGTCACGTGAC 11 V_PET1_02_M02072 TRANSFAC - 1401901 1401910 6.0E-06 ACCGGAAGTG 10 V_ERF_01_M01984 TRANSFAC - 1401901 1401910 3.0E-06 ACCGGAAGTG 10 V_ER81_02_M02065 TRANSFAC - 1401901 1401910 2.0E-06 ACCGGAAGTG 10 V_ERG_01_M01752 TRANSFAC - 1401902 1401910 4.0E-06 ACCGGAAGT 9 V_GABPA_01_M02039 TRANSFAC - 1401901 1401910 3.0E-06 ACCGGAAGTG 10 V_CETS2_01_M01989 TRANSFAC - 1401901 1401910 3.0E-06 ACCGGAAGTG 10 V_GADP_01_M01258 TRANSFAC + 1401901 1401912 1.0E-06 CACTTCCGGTCC 12 V_PET1_01_M02037 TRANSFAC - 1401901 1401910 3.0E-06 ACCGGAAGTG 10 V_USF_01_M00121 TRANSFAC + 1401916 1401929 7.0E-06 TGGTCACGTGACCG 14 V_USF_01_M00121 TRANSFAC - 1401916 1401929 7.0E-06 CGGTCACGTGACCA 14 V_NFKAPPAB50_01_M00051 TRANSFAC - 1401826 1401835 8.0E-06 GGGGAGTCCC 10 V_MUSCLE_INI_B_M00321 TRANSFAC - 1401958 1401978 5.0E-06 CCCCGCCGCCATCGCGCCGCA 21 V_CETS1P54_01_M00032 TRANSFAC - 1401901 1401910 5.0E-06 ACCGGAAGTG 10 V_PEA3_02_M02066 TRANSFAC - 1401901 1401910 2.0E-06 ACCGGAAGTG 10 V_ERF_02_M02061 TRANSFAC - 1401901 1401910 3.0E-06 ACCGGAAGTG 10 V_ER71_01_M01988 TRANSFAC - 1401901 1401910 5.0E-06 ACCGGAAGTG 10 V_NET_01_M01982 TRANSFAC - 1401901 1401910 3.0E-06 ACCGGAAGTG 10 V_ER81_01_M01987 TRANSFAC - 1401901 1401910 3.0E-06 ACCGGAAGTG 10 V_ERM_02_M02069 TRANSFAC - 1401901 1401910 3.0E-06 ACCGGAAGTG 10 V_GABPBETA_Q3_M01876 TRANSFAC - 1401900 1401910 3.0E-06 ACCGGAAGTGG 11 V_STRA13_01_M00985 TRANSFAC + 1401916 1401929 6.0E-06 TGGTCACGTGACCG 14 V_STRA13_01_M00985 TRANSFAC - 1401916 1401929 2.0E-06 CGGTCACGTGACCA 14 V_STRA13_01_M00985 TRANSFAC + 1401932 1401945 1.0E-05 ACTTCACGTGACCG 14 V_CNOT3_01_M01253 TRANSFAC + 1401843 1401852 8.0E-06 GGCCGCGCCC 10 V_TFEB_01_M01768 TRANSFAC + 1401918 1401927 3.0E-06 GTCACGTGAC 10 V_TFEB_01_M01768 TRANSFAC - 1401918 1401927 3.0E-06 GTCACGTGAC 10 V_NRF2_01_M00108 TRANSFAC - 1401901 1401910 2.0E-06 ACCGGAAGTG 10 V_SAP1A_03_M02058 TRANSFAC - 1401901 1401910 2.0E-06 ACCGGAAGTG 10 V_P63_01_M01656 TRANSFAC + 1397611 1397630 9.0E-06 GGACAAGCTCAAACAGGTAG 20 V_CETS1_02_M02063 TRANSFAC - 1401901 1401910 3.0E-06 ACCGGAAGTG 10 V_EKLF_Q5_M01874 TRANSFAC - 1401276 1401285 9.0E-06 CCACACCCAC 10 V_NET_02_M02060 TRANSFAC - 1401901 1401910 4.0E-06 ACCGGAAGTG 10 V_ERG_02_M01985 TRANSFAC - 1401901 1401910 2.0E-06 ACCGGAAGTG 10 V_ELK1_03_M01163 TRANSFAC - 1401901 1401911 1.0E-06 GACCGGAAGTG 11 V_ER71_02_M02067 TRANSFAC - 1401901 1401910 3.0E-06 ACCGGAAGTG 10 V_AR_Q2_M00447 TRANSFAC - 1402242 1402256 2.0E-06 AGAACGGGTTGTTCA 15 V_ETV3_02_M02068 TRANSFAC - 1401901 1401910 2.0E-06 ACCGGAAGTG 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.