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CSMD2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 114784 CUB and Sushi multiple domains 2 chr1 - 34630943 - 34636443 34631443 Transcription Factor Binding Sites   Download all TFBS in the CSMD2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints TBX20_TBX_full_monomeric_11_1 SELEX + 34632290 34632300 7.0E-06 AGGGTGTGAAG 11 SP3_C2H2_DBD_monomeric_11_1 SELEX - 34628896 34628906 6.0E-06 CCCACACCCAC 11 Myc_MA0147.1 JASPAR - 34633191 34633200 9.0E-06 AGCACGTGGA 10 EWSR1-FLI1_MA0149.1 JASPAR + 34630746 34630763 6.0E-06 GAAAGGAGGTCAGGAGAG 18 GLI2_C2H2_DBD_monomeric_14_1 SELEX - 34633266 34633279 4.0E-06 GACCACACACTGTG 14 Tcfap2a_TFAP_DBD_dimeric_13_1 SELEX + 34628683 34628695 8.0E-06 TCCCCTAGGGGCA 13 Tcfap2a_TFAP_DBD_dimeric_13_1 SELEX - 34628683 34628695 3.0E-06 TGCCCCTAGGGGA 13 Tcfap2a_TFAP_DBD_dimeric_13_1 SELEX - 34628701 34628713 5.0E-06 TGCCCCTTGGGCA 13 NR2F1_MA0017.1 JASPAR - 34631981 34631994 9.0E-06 TGGACCTTGCCCCT 14 TFAP2C_TFAP_full_dimeric_13_1 SELEX + 34628701 34628713 7.0E-06 TGCCCAAGGGGCA 13 TFAP2C_TFAP_full_dimeric_13_1 SELEX - 34628701 34628713 6.0E-06 TGCCCCTTGGGCA 13 RUNX3_RUNX_full_monomeric_10_1 SELEX + 34631063 34631072 1.0E-06 AAACCACAAA 10 OTX1_homeodomain_DBD_monomeric_8_1 SELEX - 34630944 34630951 1.0E-05 TTAATCCG 8 RUNX2_RUNX_DBD_monomeric_9_1 SELEX + 34631063 34631071 8.0E-06 AAACCACAA 9 SP1_MA0079.2 JASPAR - 34632330 34632339 7.0E-06 CCCCGCCCCC 10 TFAP2A_TFAP_DBD_dimeric_13_1 SELEX + 34628683 34628695 9.0E-06 TCCCCTAGGGGCA 13 TFAP2A_TFAP_DBD_dimeric_13_1 SELEX - 34628683 34628695 2.0E-06 TGCCCCTAGGGGA 13 TFAP2A_TFAP_DBD_dimeric_13_1 SELEX - 34628701 34628713 4.0E-06 TGCCCCTTGGGCA 13 INSM1_MA0155.1 JASPAR + 34632813 34632824 9.0E-06 TGCCTGGGGGTG 12 TFAP2B_TFAP_DBD_dimeric_13_1 SELEX + 34628683 34628695 7.0E-06 TCCCCTAGGGGCA 13 TFAP2B_TFAP_DBD_dimeric_13_1 SELEX - 34628683 34628695 3.0E-06 TGCCCCTAGGGGA 13 TFAP4_bHLH_full_dimeric_10_1 SELEX + 34631346 34631355 3.0E-06 ACCAGCTGAT 10 Myf_MA0055.1 JASPAR + 34630549 34630560 8.0E-06 CAACAGCAGCAG 12 TBX20_TBX_DBD_monomeric_15_1 SELEX + 34632287 34632301 9.0E-06 GGAAGGGTGTGAAGA 15 Mafb_bZIP_DBD_dimeric_18_1 SELEX - 34632757 34632774 8.0E-06 ACTGCTGGCGTAGTCAGT 18 RUNX1_MA0002.2 JASPAR - 34631063 34631073 1.0E-06 ATTTGTGGTTT 11 RREB1_MA0073.1 JASPAR + 34631194 34631213 9.0E-06 CACACAAACACACACACACA 20 RREB1_MA0073.1 JASPAR + 34631830 34631849 4.0E-06 CCCCACCCCATCCCCCACCC 20 V_ELF5_02_M01980 TRANSFAC - 34632177 34632186 3.0E-06 CCCGGAAATT 10 V_MINI20_B_M00324 TRANSFAC + 34631425 34631445 8.0E-06 CTCCTACCCCATCCCAGGAGA 21 V_MEQ_01_M02049 TRANSFAC + 34631200 34631208 7.0E-06 AACACACAC 9 V_FOXP1_01_M00987 TRANSFAC - 34631185 34631204 1.0E-06 GTGTTTGTGTGTGTGTGTGT 20 V_FOXP1_01_M00987 TRANSFAC - 34631191 34631210 1.0E-06 GTGTGTGTGTTTGTGTGTGT 20 V_FOXP1_01_M00987 TRANSFAC - 34631199 34631218 5.0E-06 GTGTGTGTGTGTGTGTGTTT 20 V_AP2ALPHA_Q6_M01857 TRANSFAC - 34631387 34631397 6.0E-06 CGCCCCCGGCC 11 V_NFKB_Q6_01_M00774 TRANSFAC - 34632270 34632285 9.0E-06 TGGATGGAAATTCCTG 16 V_AML_Q6_M00769 TRANSFAC - 34631061 34631075 4.0E-06 TAATTTGTGGTTTAT 15 V_OSF2_Q6_M00731 TRANSFAC + 34631065 34631072 1.0E-05 ACCACAAA 8 V_ATF5_01_M01295 TRANSFAC + 34632677 34632687 6.0E-06 CTTCTCCCTTC 11 V_SMAD3_Q6_01_M01888 TRANSFAC - 34630233 34630245 9.0E-06 AGACAGACATCCC 13 V_FOXD3_01_M00130 TRANSFAC - 34628729 34628740 9.0E-06 AATTGTTTTTCT 12 V_AML3_Q6_M01856 TRANSFAC + 34631064 34631071 1.0E-05 AACCACAA 8 V_NERF_01_M01976 TRANSFAC - 34632177 34632186 7.0E-06 CCCGGAAATT 10 V_SPIB_02_M02041 TRANSFAC + 34628538 34628547 4.0E-06 AGAGGAACTA 10 V_MAFB_03_M02879 TRANSFAC - 34631100 34631114 5.0E-06 CAATTGCAAAACAGA 15 V_EOMES_03_M02747 TRANSFAC + 34632287 34632303 9.0E-06 GGAAGGGTGTGAAGAGG 17 V_ELF1_01_M01975 TRANSFAC - 34632177 34632186 4.0E-06 CCCGGAAATT 10 V_ZFP740_03_M02834 TRANSFAC - 34632324 34632339 4.0E-06 CCCCGCCCCCCAATTC 16 V_SRY_02_M00160 TRANSFAC + 34628731 34628742 1.0E-05 AAAAACAATTCA 12 V_AP4_Q6_M00176 TRANSFAC - 34631346 34631355 8.0E-06 ATCAGCTGGT 10 V_GATA1_03_M00127 TRANSFAC - 34633340 34633353 1.0E-06 ATGGTGATTATCGC 14 V_SP1_03_M02281 TRANSFAC - 34632330 34632339 7.0E-06 CCCCGCCCCC 10 V_AP2_Q6_M00189 TRANSFAC - 34630913 34630924 2.0E-06 CGCCCCCCGGCG 12 V_SP1_02_M01303 TRANSFAC + 34632331 34632341 8.0E-06 GGGGCGGGGGC 11 V_SP1_02_M01303 TRANSFAC - 34632439 34632449 5.0E-06 GGGGTGGGGGG 11 V_AP4_Q6_02_M01860 TRANSFAC - 34632479 34632491 7.0E-06 CCAGCTGTGGGAT 13 V_LYF1_01_M00141 TRANSFAC + 34633284 34633292 9.0E-06 TTTGGGAGG 9 V_GM497_04_M02864 TRANSFAC - 34631447 34631462 8.0E-06 CTACGCACACACGCCC 16 V_NFAT2_01_M01748 TRANSFAC - 34632274 34632282 5.0E-06 ATGGAAATT 9 V_P53_02_M00272 TRANSFAC - 34633380 34633389 7.0E-06 TGACATGCCT 10 V_LXRB_RXRA_Q5_M02021 TRANSFAC + 34630750 34630764 7.0E-06 GGAGGTCAGGAGAGC 15 V_BCL6_02_M01185 TRANSFAC - 34628986 34628999 3.0E-06 GACTTTCTTAGGTT 14 V_ELF2_02_M02054 TRANSFAC - 34632177 34632186 4.0E-06 CCCGGAAATT 10 V_MYC_01_M02250 TRANSFAC - 34633191 34633200 9.0E-06 AGCACGTGGA 10 V_PITX1_Q6_M01826 TRANSFAC - 34631816 34631826 6.0E-06 GACACTAAGCC 11 V_SPIC_01_M02042 TRANSFAC + 34628538 34628547 7.0E-06 AGAGGAACTA 10 V_ZNF219_01_M01122 TRANSFAC + 34632437 34632448 2.0E-06 CTCCCCCCACCC 12 V_MYF_01_M01302 TRANSFAC + 34630549 34630560 8.0E-06 CAACAGCAGCAG 12 V_SPI1_03_M02078 TRANSFAC + 34628538 34628547 6.0E-06 AGAGGAACTA 10 V_RUNX1_01_M02257 TRANSFAC - 34631063 34631073 1.0E-06 ATTTGTGGTTT 11 V_COUP_01_M00158 TRANSFAC - 34631981 34631994 9.0E-06 TGGACCTTGCCCCT 14 V_CMYC_01_M01145 TRANSFAC + 34633190 34633201 9.0E-06 GTCCACGTGCTT 12 V_PAX9_B_M00329 TRANSFAC - 34628941 34628964 6.0E-06 GACACCCAGAGAGGGGCGCCCGCG 24 V_AML2_01_M01759 TRANSFAC + 34631064 34631071 1.0E-05 AACCACAA 8 V_KROX_Q6_M00982 TRANSFAC - 34630061 34630074 6.0E-06 TGCGCCCCCTCCCC 14 V_KROX_Q6_M00982 TRANSFAC - 34632331 34632344 2.0E-06 CCTGCCCCCGCCCC 14 V_SP1_Q6_M00196 TRANSFAC + 34632329 34632341 4.0E-06 GGGGGGCGGGGGC 13 MYC_MAX_MA0059.1 JASPAR - 34633191 34633201 4.0E-06 AAGCACGTGGA 11 V_EHF_02_M01974 TRANSFAC - 34632177 34632186 5.0E-06 CCCGGAAATT 10 V_AP4_Q5_M00175 TRANSFAC - 34631346 34631355 3.0E-06 ATCAGCTGGT 10 V_PEBP_Q6_M00984 TRANSFAC + 34631061 34631075 4.0E-06 ATAAACCACAAATTA 15 V_SPIB_01_M01204 TRANSFAC - 34632450 34632466 8.0E-06 GGAAACCGGAACAACTT 17 V_RREB1_01_M00257 TRANSFAC + 34631191 34631204 1.0E-05 ACACACACAAACAC 14 V_RREB1_01_M00257 TRANSFAC + 34631195 34631208 6.0E-06 ACACAAACACACAC 14 V_STAT4_Q5_M02117 TRANSFAC - 34631120 34631129 2.0E-06 TTAAAAGAAA 10 V_E2F_Q4_02_M00939 TRANSFAC + 34629727 34629735 6.0E-06 TTTGGCGCG 9 V_SP3_Q3_M00665 TRANSFAC - 34631324 34631337 6.0E-06 AGACTTGGGGAACG 14 V_INSM1_01_M02268 TRANSFAC + 34632813 34632824 9.0E-06 TGCCTGGGGGTG 12 V_ELF4_01_M01979 TRANSFAC - 34632177 34632186 6.0E-06 CCCGGAAATT 10 V_GLI3_01_M01596 TRANSFAC + 34633270 34633280 8.0E-06 GTGTGTGGTCC 11 V_SP4_Q5_M01273 TRANSFAC - 34632330 34632340 5.0E-06 CCCCCGCCCCC 11 V_PTF1BETA_Q6_M00657 TRANSFAC - 34630766 34630779 9.0E-06 GAAAAAAGCTCCAG 14 V_HBP1_04_M02866 TRANSFAC + 34632683 34632699 1.0E-06 CCTTCCCATTGTCCAGA 17 V_E2F_03_M00516 TRANSFAC + 34629727 34629738 8.0E-06 TTTGGCGCGGAG 12 V_CIZ_01_M00734 TRANSFAC + 34630786 34630794 2.0E-06 GAAAAAATC 9 V_ALPHACP1_01_M00687 TRANSFAC + 34628760 34628770 7.0E-06 TCTCCAATCAG 11 V_TAL1_01_M01591 TRANSFAC - 34632742 34632754 3.0E-06 CTTCCTCCTCTCC 13 V_E2F_Q6_01_M00920 TRANSFAC - 34629726 34629737 9.0E-06 TCCGCGCCAAAG 12 V_PLAG1_01_M01778 TRANSFAC + 34632659 34632674 6.0E-06 GGGGCAGTGAGGAGGG 16 V_HNF4_Q6_01_M01031 TRANSFAC + 34631982 34631995 9.0E-06 GGGGCAAGGTCCAG 14 V_SPIC_02_M02077 TRANSFAC + 34628538 34628547 7.0E-06 AGAGGAACTA 10 V_E2F_Q3_01_M00918 TRANSFAC + 34629727 34629735 6.0E-06 TTTGGCGCG 9 V_T3RBETA_Q6_01_M02119 TRANSFAC + 34630025 34630041 9.0E-06 GGGGCAGGGAAGGGCAG 17 V_T3RBETA_Q6_01_M02119 TRANSFAC + 34630742 34630758 1.0E-06 AGGAGAAAGGAGGTCAG 17 V_ETS1_B_M00339 TRANSFAC - 34633148 34633162 6.0E-06 GGAGGATGTGAGTAA 15 V_ZFP281_01_M01597 TRANSFAC - 34631836 34631846 5.0E-06 TGGGGGATGGG 11 V_ZFP281_01_M01597 TRANSFAC - 34632547 34632557 1.0E-06 TGGGGGTGGGG 11 V_SOX21_04_M02907 TRANSFAC - 34628728 34628744 4.0E-06 ACTGAATTGTTTTTCTG 17 V_TBX22_01_M01195 TRANSFAC + 34631366 34631384 7.0E-06 GGCTTTGAACTTGCCATCT 19 V_SOX8_03_M02808 TRANSFAC - 34628729 34628745 1.0E-05 GACTGAATTGTTTTTCT 17 V_ZFP281_04_M02831 TRANSFAC + 34631834 34631848 1.0E-06 ACCCCATCCCCCACC 15 V_ZFP281_04_M02831 TRANSFAC + 34632433 34632447 4.0E-06 CTCCCTCCCCCCACC 15 V_EWSR1FLI1_01_M02252 TRANSFAC + 34630746 34630763 6.0E-06 GAAAGGAGGTCAGGAGAG 18 V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC - 34631063 34631070 1.0E-05 TGTGGTTT 8 V_SMAD3_Q6_M00701 TRANSFAC + 34630237 34630245 3.0E-06 TGTCTGTCT 9 V_PLAGL1_03_M02786 TRANSFAC - 34629032 34629047 5.0E-06 GGGAGGGCGCCCCGAG 16 V_EKLF_Q5_M01874 TRANSFAC - 34628896 34628905 9.0E-06 CCACACCCAC 10 V_ELF_02_M02053 TRANSFAC - 34632177 34632186 6.0E-06 CCCGGAAATT 10 V_SP1_Q2_01_M00933 TRANSFAC - 34632330 34632339 4.0E-06 CCCCGCCCCC 10 V_FOXO4_01_M00472 TRANSFAC + 34628731 34628741 3.0E-06 AAAAACAATTC 11 V_UF1H3BETA_Q6_M01068 TRANSFAC + 34632333 34632346 5.0E-06 GGCGGGGGCAGGGC 14 V_UF1H3BETA_Q6_M01068 TRANSFAC - 34632434 34632447 8.0E-06 GGTGGGGGGAGGGA 14 V_UF1H3BETA_Q6_M01068 TRANSFAC - 34632546 34632559 0.0E+00 GTTGGGGGTGGGGA 14 V_SP1_Q4_01_M00932 TRANSFAC + 34632329 34632341 8.0E-06 GGGGGGCGGGGGC 13 V_CDPCR3_01_M00105 TRANSFAC - 34632318 34632332 6.0E-06 CCCCAATTCATATCG 15 V_PAX4_04_M00380 TRANSFAC - 34630751 34630780 3.0E-06 AGAAAAAAGCTCCAGAGCTCTCCTGACCTC 30 V_SPI1_02_M02043 TRANSFAC + 34628538 34628547 4.0E-06 AGAGGAACTA 10 V_NF1_Q6_M00193 TRANSFAC - 34632590 34632607 1.0E-05 TCTTGGCACCCAGCAAGG 18 V_CEBPA_Q6_M01866 TRANSFAC + 34631101 34631113 3.0E-06 CTGTTTTGCAATT 13 V_ELF4_02_M02056 TRANSFAC - 34632177 34632186 4.0E-06 CCCGGAAATT 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.