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PALM2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 114299 paralemmin 2 chr9 + 112398067 - 112403567 112403067 Transcription Factor Binding Sites   Download all TFBS in the PALM2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SOX10_HMG_full_dimeric_16_1 SELEX + 112403565 112403580 6.0E-06 AACGCGGTTCAGTGTG 16 SPIC_ETS_full_monomeric_14_1 SELEX - 112402937 112402950 3.0E-06 TAAAACGGGAAGCA 14 RFX4_RFX_DBD_dimeric_16_1 SELEX + 112403191 112403206 0.0E+00 TGTTGCCATGGTGACC 16 RFX4_RFX_DBD_dimeric_16_1 SELEX - 112403191 112403206 0.0E+00 GGTCACCATGGCAACA 16 Mafb_bZIP_DBD_monomeric_12_1 SELEX - 112403504 112403515 1.0E-06 ATAATGCTGACA 12 TFAP2C_TFAP_full_dimeric_13_1 SELEX - 112402702 112402714 7.0E-06 AGCCCAGAGGGCA 13 SPIB_ETS_DBD_monomeric_14_1 SELEX - 112403448 112403461 9.0E-06 GATAAGCGGAAGCT 14 TEAD1_TEA_full_monomeric_10_1 SELEX + 112405975 112405984 8.0E-06 AACATTCCAA 10 RFX2_RFX_DBD_dimeric_15_1 SELEX + 112405964 112405978 8.0E-06 CATTCCCAAGCAACA 15 Rfx3_RFX_DBD_dimeric_16_1 SELEX + 112403191 112403206 0.0E+00 TGTTGCCATGGTGACC 16 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 112403191 112403206 0.0E+00 GGTCACCATGGCAACA 16 RUNX2_RUNX_DBD_dimeric_18_1 SELEX - 112403336 112403353 2.0E-06 CAGCCGCAAAAACCACGC 18 NRL_bZIP_DBD_monomeric_11_1 SELEX - 112403505 112403515 2.0E-06 ATAATGCTGAC 11 RFX2_RFX_DBD_dimeric_16_1 SELEX + 112403191 112403206 0.0E+00 TGTTGCCATGGTGACC 16 RFX2_RFX_DBD_dimeric_16_1 SELEX - 112403191 112403206 0.0E+00 GGTCACCATGGCAACA 16 RFX5_RFX_DBD_dimeric_16_3 SELEX + 112403191 112403206 1.0E-06 TGTTGCCATGGTGACC 16 RFX5_RFX_DBD_dimeric_16_3 SELEX - 112403191 112403206 0.0E+00 GGTCACCATGGCAACA 16 TEAD3_TEA_DBD_monomeric_8_1 SELEX + 112405976 112405983 1.0E-05 ACATTCCA 8 NFIB_NFI_full_dimeric_15_1 SELEX - 112402668 112402682 9.0E-06 TTGGCAAGGTGGCAG 15 TEAD4_TEA_DBD_monomeric_10_1 SELEX + 112405975 112405984 8.0E-06 AACATTCCAA 10 MAFK_bZIP_full_monomeric_12_1 SELEX - 112403505 112403516 0.0E+00 AATAATGCTGAC 12 SPI1_ETS_full_monomeric_14_1 SELEX - 112402937 112402950 7.0E-06 TAAAACGGGAAGCA 14 SPI1_ETS_full_monomeric_14_1 SELEX - 112403448 112403461 8.0E-06 GATAAGCGGAAGCT 14 RUNX3_RUNX_DBD_dimeric_18_1 SELEX - 112403336 112403353 1.0E-06 CAGCCGCAAAAACCACGC 18 V_SPI1_01_M01203 TRANSFAC - 112402934 112402950 8.0E-06 TAAAACGGGAAGCAATT 17 V_APOLYA_B_M00310 TRANSFAC - 112403243 112403257 5.0E-06 ATTAAACACCCATCC 15 V_MAFK_03_M02776 TRANSFAC - 112403503 112403517 0.0E+00 CAATAATGCTGACAT 15 V_MTF1_Q4_M00650 TRANSFAC + 112403067 112403080 9.0E-06 AGTGCACTCGGCTC 14 V_MAFB_05_M02775 TRANSFAC - 112403500 112403516 0.0E+00 AATAATGCTGACATGGT 17 V_AP2_Q6_01_M00915 TRANSFAC - 112403369 112403381 1.0E-06 CGCCCCCCAGGCC 13 V_PU1_Q4_M01172 TRANSFAC + 112402931 112402949 5.0E-06 TCCAATTGCTTCCCGTTTT 19 V_FKLF_Q5_M01837 TRANSFAC + 112403317 112403326 2.0E-06 GGGGTGGGAG 10 V_IRF2_01_M00063 TRANSFAC - 112403449 112403461 1.0E-05 GATAAGCGGAAGC 13 V_SPIB_01_M01204 TRANSFAC - 112402934 112402950 7.0E-06 TAAAACGGGAAGCAATT 17 V_TFIII_Q6_M00706 TRANSFAC + 112403534 112403542 6.0E-06 AGAGGGAGG 9 V_CNOT3_01_M01253 TRANSFAC - 112403057 112403066 4.0E-06 GGCCGCGCCG 10 V_AIRE_01_M00999 TRANSFAC - 112403475 112403500 2.0E-06 TTAGGAATCGGAAGTCATGGCTATTG 26 V_FPM315_01_M01587 TRANSFAC - 112402734 112402745 4.0E-06 GGGGGAGCAGGG 12 V_RFX3_04_M02788 TRANSFAC - 112403394 112403416 4.0E-06 CTCCGTCCTTAGCAACATCATCT 23 V_BSX_01_M01442 TRANSFAC - 112402927 112402942 4.0E-06 GAAGCAATTGGATAAT 16 V_CMAF_01_M01070 TRANSFAC - 112403498 112403516 0.0E+00 AATAATGCTGACATGGTTA 19 V_RFX1_02_M00281 TRANSFAC - 112403190 112403207 0.0E+00 CGGTCACCATGGCAACAT 18

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.