Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

CHRNB3 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 1142 cholinergic receptor, nicotinic, beta 3 (neuronal) chr8 + 42547561 - 42553061 42552561 Transcription Factor Binding Sites   Download all TFBS in the CHRNB3 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 42553090 42553107 8.0E-06 TATATCAACATTTTTCTA 18 FOXB1_forkhead_DBD_dimeric_18_1 SELEX - 42553090 42553107 3.0E-06 TAGAAAAATGTTGATATA 18 FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 42553136 42553153 6.0E-06 CATGTAGATATTTAATTT 18 FOXB1_forkhead_DBD_dimeric_18_1 SELEX - 42553136 42553153 3.0E-06 AAATTAAATATCTACATG 18 CTCF_MA0139.1 JASPAR + 42547805 42547823 1.0E-06 GAGCCACCAGAGGGCACCC 19 FOXJ2_forkhead_DBD_dimeric_13_1 SELEX - 42552948 42552960 0.0E+00 AAAAACATAAACA 13 SOX21_HMG_DBD_dimeric_15_1 SELEX - 42554065 42554079 2.0E-06 AGCAATTCCAGTTTT 15 SOX4_HMG_DBD_dimeric_16_1 SELEX - 42554065 42554080 1.0E-06 AAGCAATTCCAGTTTT 16 NFIA_NFI_full_dimeric_15_1 SELEX + 42548431 42548445 7.0E-06 CTGGCTTAGAGCCAG 15 NFIA_NFI_full_dimeric_15_1 SELEX - 42548431 42548445 7.0E-06 CTGGCTCTAAGCCAG 15 SPIC_ETS_full_monomeric_14_1 SELEX - 42547719 42547732 5.0E-06 ATAAAAAGGTAGTA 14 FOXF2_MA0030.1 JASPAR - 42552946 42552959 4.0E-06 AAAACATAAACATT 14 NR4A2_nuclearreceptor_full_monomeric_11_1 SELEX + 42547773 42547783 4.0E-06 TTTAAAGGTTA 11 SRY_HMG_DBD_dimeric_13_2 SELEX - 42550148 42550160 7.0E-06 TGATTGGCATTTA 13 FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 42552946 42552957 5.0E-06 AACATAAACATT 12 FOXC2_forkhead_DBD_monomeric_12_1 SELEX + 42553090 42553101 5.0E-06 TATATCAACATT 12 CEBPD_bZIP_DBD_dimeric_10_1 SELEX - 42554129 42554138 8.0E-06 ATTACACAAT 10 TEF_bZIP_DBD_dimeric_12_1 SELEX + 42554054 42554065 5.0E-06 GATTACATAAGA 12 FOXL1_forkhead_full_dimeric_13_1 SELEX - 42547725 42547737 5.0E-06 TTTAAATAAAAAG 13 FOXC1_forkhead_DBD_monomeric_11_1 SELEX + 42553090 42553100 4.0E-06 TATATCAACAT 11 SOX8_HMG_full_dimeric_15_1 SELEX - 42554065 42554079 0.0E+00 AGCAATTCCAGTTTT 15 TBP_MA0108.2 JASPAR - 42548745 42548759 5.0E-06 CTATAAAAAGCTTAC 15 HLF_bZIP_full_dimeric_12_1 SELEX + 42554054 42554065 1.0E-05 GATTACATAAGA 12 HLF_bZIP_full_dimeric_12_1 SELEX - 42554054 42554065 6.0E-06 TCTTATGTAATC 12 EWSR1-FLI1_MA0149.1 JASPAR + 42550052 42550069 8.0E-06 GGAAGGAAGTAAAGCATT 18 ZNF232_C2H2_full_monomeric_19_1 SELEX - 42553089 42553107 3.0E-06 TAGAAAAATGTTGATATAG 19 NFIX_NFI_full_dimeric_15_2 SELEX + 42548431 42548445 8.0E-06 CTGGCTTAGAGCCAG 15 NFIX_NFI_full_dimeric_15_2 SELEX - 42548431 42548445 7.0E-06 CTGGCTCTAAGCCAG 15 POU1F1_POU_DBD_monomeric_14_1 SELEX - 42552935 42552948 3.0E-06 ATTATGAAAATCAT 14 Alx1_homeodomain_DBD_dimeric_13_1 SELEX - 42550074 42550086 9.0E-06 CTAATCCAATCAC 13 NFIL3_MA0025.1 JASPAR - 42554053 42554063 2.0E-06 TTATGTAATCA 11 Sox17_HMG_DBD_dimeric_15_1 SELEX - 42554065 42554079 7.0E-06 AGCAATTCCAGTTTT 15 DBP_bZIP_full_dimeric_12_1 SELEX + 42554054 42554065 4.0E-06 GATTACATAAGA 12 DBP_bZIP_full_dimeric_12_1 SELEX - 42554054 42554065 9.0E-06 TCTTATGTAATC 12 FOXD2_forkhead_DBD_dimeric_14_1 SELEX + 42552942 42552955 9.0E-06 TCATAATGTTTATG 14 FOXD2_forkhead_DBD_dimeric_14_1 SELEX - 42553092 42553105 2.0E-06 GAAAAATGTTGATA 14 Pax4_MA0068.1 JASPAR - 42554113 42554142 2.0E-06 AAAGATTACACAATCTTCCCAAACTCTTCC 30 Pax4_MA0068.1 JASPAR - 42554114 42554143 1.0E-06 GAAAGATTACACAATCTTCCCAAACTCTTC 30 MEOX2_homeodomain_DBD_dimeric_14_1 SELEX - 42550068 42550081 7.0E-06 CCAATCACCATCAA 14 IRF1_MA0050.1 JASPAR + 42549944 42549955 7.0E-06 AAAAGTAAAAGT 12 PROP1_homeodomain_full_dimeric_11_1 SELEX - 42550075 42550085 9.0E-06 TAATCCAATCA 11 POU3F3_POU_DBD_monomeric_13_1 SELEX - 42552936 42552948 9.0E-06 ATTATGAAAATCA 13 FOXD3_forkhead_DBD_dimeric_14_1 SELEX + 42552942 42552955 6.0E-06 TCATAATGTTTATG 14 FOXD3_forkhead_DBD_dimeric_14_1 SELEX - 42553092 42553105 3.0E-06 GAAAAATGTTGATA 14 CEBPB_bZIP_full_dimeric_10_1 SELEX - 42554129 42554138 7.0E-06 ATTACACAAT 10 RUNX2_RUNX_DBD_dimeric_18_1 SELEX - 42547899 42547916 2.0E-06 AGACCTCAGAAGCCGCAG 18 Foxq1_MA0040.1 JASPAR + 42552945 42552955 2.0E-06 TAATGTTTATG 11 ALX3_homeodomain_full_dimeric_13_1 SELEX - 42550074 42550086 8.0E-06 CTAATCCAATCAC 13 NR4A2_nuclearreceptor_full_dimeric_16_1 SELEX + 42547768 42547783 0.0E+00 CACCCTTTAAAGGTTA 16 NR4A2_nuclearreceptor_full_dimeric_16_1 SELEX - 42547768 42547783 0.0E+00 TAACCTTTAAAGGGTG 16 FOXI1_MA0042.1 JASPAR + 42552945 42552956 1.0E-05 TAATGTTTATGT 12 NFIX_NFI_full_monomeric_9_2 SELEX + 42550150 42550158 8.0E-06 AATGCCAAT 9 DRGX_homeodomain_DBD_dimeric_13_1 SELEX - 42550074 42550086 6.0E-06 CTAATCCAATCAC 13 FOXC1_forkhead_DBD_dimeric_14_1 SELEX - 42553092 42553105 7.0E-06 GAAAAATGTTGATA 14 PHOX2B_homeodomain_full_dimeric_11_1 SELEX - 42550075 42550085 9.0E-06 TAATCCAATCA 11 Alx4_homeodomain_DBD_dimeric_13_1 SELEX - 42550074 42550086 7.0E-06 CTAATCCAATCAC 13 SOX18_HMG_full_dimeric_15_1 SELEX - 42554065 42554079 6.0E-06 AGCAATTCCAGTTTT 15 CTCF_C2H2_full_monomeric_17_1 SELEX - 42547806 42547822 6.0E-06 GGTGCCCTCTGGTGGCT 17 Lhx3_MA0135.1 JASPAR + 42553082 42553094 8.0E-06 AAATTTACTATAT 13 TBX4_TBX_DBD_dimeric_20_1 SELEX + 42553531 42553550 9.0E-06 TGGTGAGAAAAGTGTCAGTT 20 FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 42547726 42547736 3.0E-06 TTAAATAAAAA 11 SOX7_HMG_full_dimeric_17_1 SELEX - 42554064 42554080 3.0E-06 AAGCAATTCCAGTTTTC 17 ZSCAN4_C2H2_full_monomeric_15_1 SELEX + 42547764 42547778 1.0E-06 CACACACCCTTTAAA 15 NFIL3_bZIP_DBD_dimeric_12_1 SELEX + 42554054 42554065 3.0E-06 GATTACATAAGA 12 NFIL3_bZIP_DBD_dimeric_12_1 SELEX - 42554128 42554139 1.0E-05 GATTACACAATC 12 POU1F1_POU_DBD_monomeric_17_1 SELEX + 42550137 42550153 8.0E-06 TTCATGATTACTAAATG 17 PRRX1_homeodomain_full_dimeric_11_1 SELEX - 42550075 42550085 6.0E-06 TAATCCAATCA 11 HESX1_homeodomain_DBD_dimeric_15_1 SELEX - 42550147 42550161 3.0E-06 CTGATTGGCATTTAG 15 HESX1_homeodomain_DBD_dimeric_15_1 SELEX - 42553110 42553124 2.0E-06 ATTATTGGTAAATAT 15 POU3F1_POU_DBD_monomeric_12_1 SELEX - 42552936 42552947 8.0E-06 TTATGAAAATCA 12 Foxd3_MA0041.1 JASPAR + 42552945 42552956 8.0E-06 TAATGTTTATGT 12 LHX9_homeodomain_DBD_dimeric_13_1 SELEX + 42550148 42550160 7.0E-06 TAAATGCCAATCA 13 TBX2_TBX_full_dimeric_18_1 SELEX + 42553532 42553549 9.0E-06 GGTGAGAAAAGTGTCAGT 18 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX + 42549943 42549957 0.0E+00 AAAAAGTAAAAGTTA 15 FOXC2_forkhead_DBD_dimeric_14_1 SELEX - 42553092 42553105 9.0E-06 GAAAAATGTTGATA 14 FEV_MA0156.1 JASPAR - 42553435 42553442 1.0E-05 CAGGAAAT 8 NFIB_NFI_full_dimeric_15_1 SELEX + 42548431 42548445 7.0E-06 CTGGCTTAGAGCCAG 15 NFIB_NFI_full_dimeric_15_1 SELEX - 42548431 42548445 9.0E-06 CTGGCTCTAAGCCAG 15 DUXA_homeodomain_DBD_dimeric_13_1 SELEX - 42550074 42550086 2.0E-06 CTAATCCAATCAC 13 Pou5f1_MA0142.1 JASPAR - 42554054 42554068 1.0E-05 TTTTCTTATGTAATC 15 HLF_MA0043.1 JASPAR - 42554128 42554139 2.0E-06 GATTACACAATC 12 Sox11_HMG_DBD_dimeric_15_1 SELEX - 42554065 42554079 2.0E-06 AGCAATTCCAGTTTT 15 PHOX2A_homeodomain_DBD_dimeric_11_1 SELEX - 42550075 42550085 8.0E-06 TAATCCAATCA 11 CPEB1_RRM_full_monomeric_8_1 SELEX - 42547726 42547733 4.0E-06 AATAAAAA 8 CEBPE_bZIP_DBD_dimeric_10_1 SELEX - 42554129 42554138 6.0E-06 ATTACACAAT 10 Nr2f6_nuclearreceptor_DBD_dimeric_15_1 SELEX + 42548015 42548029 9.0E-06 GAGCTCAGGAGTTCA 15 POU3F3_POU_DBD_dimeric_12_1 SELEX + 42554056 42554067 9.0E-06 TTACATAAGAAA 12 POU3F2_POU_DBD_monomeric_12_1 SELEX - 42552936 42552947 6.0E-06 TTATGAAAATCA 12 ELF5_MA0136.1 JASPAR - 42550054 42550062 4.0E-06 TACTTCCTT 9 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 42547726 42547738 6.0E-06 TTTTAAATAAAAA 13 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 42552948 42552960 2.0E-06 AAAAACATAAACA 13 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 42553004 42553016 9.0E-06 AAGAAAATACAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 42552948 42552960 0.0E+00 AAAAACATAAACA 13 FOXB1_forkhead_DBD_monomeric_11_1 SELEX + 42553090 42553100 6.0E-06 TATATCAACAT 11 NFIA_NFI_full_monomeric_10_1 SELEX - 42553071 42553080 2.0E-06 TGTGCCAAAT 10 SOX9_HMG_full_dimeric_17_1 SELEX - 42554064 42554080 1.0E-06 AAGCAATTCCAGTTTTC 17 RUNX3_RUNX_DBD_dimeric_18_1 SELEX - 42547899 42547916 2.0E-06 AGACCTCAGAAGCCGCAG 18 V_ELF5_02_M01980 TRANSFAC - 42553434 42553443 7.0E-06 CCAGGAAATT 10 V_FOXP1_01_M00987 TRANSFAC + 42552947 42552966 1.0E-06 ATGTTTATGTTTTTGTCATT 20 V_CEBPG_Q6_M00622 TRANSFAC + 42547728 42547740 2.0E-06 TTTATTTAAAATT 13 V_CEBPG_Q6_M00622 TRANSFAC + 42547939 42547951 9.0E-06 CTTATTTAAAAGC 13 V_HNF3B_01_M00131 TRANSFAC + 42552943 42552957 8.0E-06 CATAATGTTTATGTT 15 V_DBX1_01_M01483 TRANSFAC + 42547726 42547742 3.0E-06 TTTTTATTTAAAATTTG 17 V_DBX1_01_M01483 TRANSFAC - 42547726 42547742 7.0E-06 CAAATTTTAAATAAAAA 17 V_FREAC7_01_M00293 TRANSFAC - 42552944 42552959 0.0E+00 AAAACATAAACATTAT 16 V_ZSCAN4_03_M02838 TRANSFAC - 42550039 42550055 5.0E-06 TTCCAGTGCACACACAC 17 V_TCF3_01_M01594 TRANSFAC - 42554057 42554069 7.0E-06 GTTTTCTTATGTA 13 V_AR_02_M00953 TRANSFAC - 42553471 42553497 7.0E-06 TGGGGGAAAACTTTCTGTTCTCAAGTT 27 V_EVI1_05_M00082 TRANSFAC - 42552924 42552934 1.0E-05 AGATATGATTT 11 V_EVI1_05_M00082 TRANSFAC - 42553105 42553115 7.0E-06 AAATATGATAG 11 V_SOX40_04_M02908 TRANSFAC - 42550078 42550093 8.0E-06 CATGATTCTAATCCAA 16 V_XFD1_01_M00267 TRANSFAC - 42552944 42552957 3.0E-06 AACATAAACATTAT 14 V_MAFK_03_M02776 TRANSFAC - 42548743 42548757 4.0E-06 ATAAAAAGCTTACTT 15 V_MAFK_03_M02776 TRANSFAC - 42553091 42553105 6.0E-06 GAAAAATGTTGATAT 15 V_FOXA2_04_M02749 TRANSFAC - 42547725 42547741 6.0E-06 AAATTTTAAATAAAAAG 17 V_NF1A_Q6_M02103 TRANSFAC + 42548431 42548446 9.0E-06 CTGGCTTAGAGCCAGG 16 V_HMGIY_Q3_M01010 TRANSFAC - 42553003 42553017 8.0E-06 TTTTGTATTTTCTTA 15 V_EVI1_04_M00081 TRANSFAC - 42553101 42553115 1.0E-06 AAATATGATAGAAAA 15 V_FOXD3_01_M00130 TRANSFAC + 42552945 42552956 5.0E-06 TAATGTTTATGT 12 V_BCL6_01_M01183 TRANSFAC + 42547726 42547741 1.0E-06 TTTTTATTTAAAATTT 16 V_BCL6_01_M01183 TRANSFAC - 42553024 42553039 2.0E-06 CATTCAATAATGTTTT 16 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC + 42553007 42553018 7.0E-06 AAAATACAAAAG 12 V_POU5F1_02_M02245 TRANSFAC - 42554054 42554068 1.0E-05 TTTTCTTATGTAATC 15 V_AR_Q6_01_M01996 TRANSFAC - 42553476 42553490 0.0E+00 AAACTTTCTGTTCTC 15 V_FOXJ2_02_M00423 TRANSFAC + 42553091 42553104 1.0E-06 ATATCAACATTTTT 14 V_OCT1_Q5_01_M00930 TRANSFAC + 42552936 42552946 1.0E-06 TGATTTTCATA 11 V_IRF_Q6_01_M00972 TRANSFAC - 42553455 42553465 0.0E+00 AAAAGTGAAAA 11 V_IRF2_Q6_M01882 TRANSFAC + 42549942 42549957 3.0E-06 TAAAAAGTAAAAGTTA 16 V_IRF2_Q6_M01882 TRANSFAC - 42553452 42553467 7.0E-06 CAAAAAGTGAAAAGAT 16 V_NFAT3_Q3_M01734 TRANSFAC - 42553020 42553029 6.0E-06 TGTTTTTCCT 10 V_SOX11_04_M02899 TRANSFAC + 42553057 42553070 2.0E-06 AGAATTGTTCAAAT 14 V_PITX3_Q2_M01735 TRANSFAC + 42550079 42550087 2.0E-06 TGGATTAGA 9 V_HNF3_Q6_01_M01012 TRANSFAC + 42552943 42552960 6.0E-06 CATAATGTTTATGTTTTT 18 V_OCT_C_M00210 TRANSFAC + 42552935 42552947 2.0E-06 ATGATTTTCATAA 13 V_PITX2_Q6_M02114 TRANSFAC + 42547972 42547981 1.0E-06 TGTAATCCCA 10 V_ZFP281_05_M02935 TRANSFAC + 42553486 42553502 6.0E-06 AGTTTTCCCCCATTGAA 17 V_GM497_04_M02864 TRANSFAC + 42547759 42547774 9.0E-06 TGAAGCACACACCCTT 16 V_GM497_04_M02864 TRANSFAC - 42550025 42550040 5.0E-06 ACAAGCACACACACTA 16 V_TCFAP2E_04_M02926 TRANSFAC - 42552909 42552922 3.0E-06 TTCAGCAAAAAAAA 14 V_CDX_Q5_M00991 TRANSFAC + 42549944 42549961 0.0E+00 AAAAGTAAAAGTTATAAA 18 V_CDX_Q5_M00991 TRANSFAC - 42552950 42552967 2.0E-06 AAATGACAAAAACATAAA 18 V_CEBPB_01_M00109 TRANSFAC + 42554127 42554140 0.0E+00 AGATTGTGTAATCT 14 V_MEF2A_Q6_M02024 TRANSFAC + 42547730 42547739 9.0E-06 TATTTAAAAT 10 V_AR_03_M00956 TRANSFAC - 42553471 42553497 2.0E-06 TGGGGGAAAACTTTCTGTTCTCAAGTT 27 V_BCL6_02_M01185 TRANSFAC - 42547918 42547931 1.0E-06 TTCTTTCCTGGGAT 14 V_RPC155_01_M01798 TRANSFAC + 42548019 42548034 0.0E+00 TCAGGAGTTCAAGACC 16 V_ELF4_04_M02850 TRANSFAC - 42547722 42547738 1.0E-05 TTTTAAATAAAAAGGTA 17 V_ELF4_04_M02850 TRANSFAC + 42548066 42548082 7.0E-06 GCCTAAAAAATAAAAGC 17 V_SOX13_03_M02797 TRANSFAC - 42553055 42553070 4.0E-06 ATTTGAACAATTCTCT 16 V_DBP_Q6_01_M01872 TRANSFAC - 42554056 42554063 5.0E-06 TTATGTAA 8 V_LMX1_01_M01409 TRANSFAC - 42547724 42547740 8.0E-06 AATTTTAAATAAAAAGG 17 V_LMX1_01_M01409 TRANSFAC + 42547725 42547741 1.0E-06 CTTTTTATTTAAAATTT 17 V_PR_01_M00954 TRANSFAC - 42553471 42553497 4.0E-06 TGGGGGAAAACTTTCTGTTCTCAAGTT 27 V_ZFP105_03_M02827 TRANSFAC - 42547723 42547737 2.0E-06 TTTAAATAAAAAGGT 15 V_E4BP4_01_M00045 TRANSFAC - 42554054 42554065 5.0E-06 TCTTATGTAATC 12 V_ARID5A_03_M02736 TRANSFAC - 42553062 42553075 8.0E-06 CAAATATTTGAACA 14 V_TATA_01_M00252 TRANSFAC - 42548745 42548759 5.0E-06 CTATAAAAAGCTTAC 15 V_RSRFC4_Q2_M00407 TRANSFAC + 42549952 42549968 6.0E-06 AAGTTATAAAAAGCTCA 17 V_HOXB9_01_M01426 TRANSFAC + 42549951 42549966 8.0E-06 AAAGTTATAAAAAGCT 16 V_IRF3_Q3_M01279 TRANSFAC + 42553452 42553464 5.0E-06 ATCTTTTCACTTT 13 V_EVI1_01_M00078 TRANSFAC + 42554053 42554068 4.0E-06 TGATTACATAAGAAAA 16 V_OCT1_05_M00161 TRANSFAC + 42552935 42552948 0.0E+00 ATGATTTTCATAAT 14 V_CDX2_Q5_M00729 TRANSFAC - 42549953 42549966 7.0E-06 AGCTTTTTATAACT 14 V_SOX18_03_M02801 TRANSFAC + 42553056 42553071 2.0E-06 GAGAATTGTTCAAATA 16 V_TATA_C_M00216 TRANSFAC - 42548751 42548760 1.0E-06 TCTATAAAAA 10 V_OCT1_04_M00138 TRANSFAC - 42552931 42552953 3.0E-06 TAAACATTATGAAAATCATAGAT 23 V_OCT1_04_M00138 TRANSFAC - 42553124 42553146 7.0E-06 ATATCTACATGCAGATATAGAAA 23 V_GR_01_M00955 TRANSFAC - 42553471 42553497 6.0E-06 TGGGGGAAAACTTTCTGTTCTCAAGTT 27 V_GR_Q6_M00192 TRANSFAC - 42553475 42553493 4.0E-06 GGAAAACTTTCTGTTCTCA 19 V_PEBP_Q6_M00984 TRANSFAC + 42549999 42550013 5.0E-06 GGTGACCACAATGCT 15 V_HFH1_01_M00129 TRANSFAC + 42552945 42552956 0.0E+00 TAATGTTTATGT 12 V_MEF2_Q6_01_M00941 TRANSFAC + 42548748 42548759 8.0E-06 AGCTTTTTATAG 12 V_MEF2_Q6_01_M00941 TRANSFAC - 42549955 42549966 6.0E-06 AGCTTTTTATAA 12 V_NCX_02_M01420 TRANSFAC + 42547726 42547742 9.0E-06 TTTTTATTTAAAATTTG 17 V_ARID3A_04_M02735 TRANSFAC - 42547724 42547740 6.0E-06 AATTTTAAATAAAAAGG 17 V_ARID3A_04_M02735 TRANSFAC + 42547725 42547741 0.0E+00 CTTTTTATTTAAAATTT 17 V_TBP_06_M02814 TRANSFAC + 42547724 42547739 1.0E-05 CCTTTTTATTTAAAAT 16 V_TBP_06_M02814 TRANSFAC + 42547726 42547741 0.0E+00 TTTTTATTTAAAATTT 16 V_TBP_06_M02814 TRANSFAC - 42547726 42547741 3.0E-06 AAATTTTAAATAAAAA 16 V_TBP_06_M02814 TRANSFAC - 42547728 42547743 1.0E-05 TCAAATTTTAAATAAA 16 V_CTCF_02_M01259 TRANSFAC + 42547802 42547821 0.0E+00 AGTGAGCCACCAGAGGGCAC 20 V_CTCF_01_M01200 TRANSFAC + 42547804 42547823 0.0E+00 TGAGCCACCAGAGGGCACCC 20 V_OCT1_B_M00342 TRANSFAC - 42552937 42552946 9.0E-06 TATGAAAATC 10 V_ISGF4G_04_M02875 TRANSFAC + 42553022 42553035 1.0E-06 GAAAAACATTATTG 14 V_OCT_Q6_M00795 TRANSFAC + 42552936 42552946 2.0E-06 TGATTTTCATA 11 V_LIM1_01_M01418 TRANSFAC - 42547724 42547740 5.0E-06 AATTTTAAATAAAAAGG 17 V_LIM1_01_M01418 TRANSFAC + 42547725 42547741 9.0E-06 CTTTTTATTTAAAATTT 17 V_VBP_01_M00228 TRANSFAC + 42554055 42554064 5.0E-06 ATTACATAAG 10 V_GR_Q6_02_M01836 TRANSFAC - 42553475 42553487 3.0E-06 CTTTCTGTTCTCA 13 V_FREAC2_01_M00290 TRANSFAC - 42552944 42552959 3.0E-06 AAAACATAAACATTAT 16 V_HFH8_01_M00294 TRANSFAC + 42552945 42552957 8.0E-06 TAATGTTTATGTT 13 V_ZFP105_04_M02931 TRANSFAC - 42553025 42553041 6.0E-06 TGCATTCAATAATGTTT 17 V_MTF1_06_M02882 TRANSFAC - 42547728 42547741 1.0E-06 AAATTTTAAATAAA 14 V_MTF1_06_M02882 TRANSFAC - 42553102 42553115 4.0E-06 AAATATGATAGAAA 14 V_MTF1_06_M02882 TRANSFAC + 42554058 42554071 4.0E-06 ACATAAGAAAACTG 14 V_FAC1_01_M00456 TRANSFAC - 42552950 42552963 4.0E-06 GACAAAAACATAAA 14 V_CEBPA_01_M00116 TRANSFAC - 42553110 42553123 9.0E-06 TTATTGGTAAATAT 14 V_CEBPA_01_M00116 TRANSFAC + 42554053 42554066 7.0E-06 TGATTACATAAGAA 14 V_CEBPA_01_M00116 TRANSFAC - 42554127 42554140 2.0E-06 AGATTACACAATCT 14 V_TCFE2A_03_M02823 TRANSFAC - 42553420 42553436 6.0E-06 ATTGGCAGGTGCAAATG 17 V_FOXL1_02_M02857 TRANSFAC - 42547725 42547740 2.0E-06 AATTTTAAATAAAAAG 16 V_TAL1ALPHAE47_01_M00066 TRANSFAC + 42553522 42553537 4.0E-06 GCAGCCAGATGGTGAG 16 V_OCT1_Q6_M00195 TRANSFAC + 42550147 42550161 4.0E-06 CTAAATGCCAATCAG 15 V_OCT1_Q6_M00195 TRANSFAC - 42552935 42552949 1.0E-05 CATTATGAAAATCAT 15 V_FOXL1_04_M02753 TRANSFAC - 42547725 42547741 3.0E-06 AAATTTTAAATAAAAAG 17 V_FOXL1_04_M02753 TRANSFAC - 42552943 42552959 3.0E-06 AAAACATAAACATTATG 17 V_ZSCAN4_04_M02942 TRANSFAC - 42550025 42550040 3.0E-06 ACAAGCACACACACTA 16 V_MYOGNF1_01_M00056 TRANSFAC - 42550141 42550169 1.0E-06 TGTAAGTTCTGATTGGCATTTAGTAATCA 29 V_HDX_01_M01333 TRANSFAC + 42552918 42552934 2.0E-06 CTGAAGAAATCATATCT 17 V_BDP1_01_M01796 TRANSFAC - 42548023 42548034 2.0E-06 GGTCTTGAACTC 12 V_LMX1B_01_M01363 TRANSFAC + 42547724 42547740 4.0E-06 CCTTTTTATTTAAAATT 17 V_LMX1B_01_M01363 TRANSFAC - 42547725 42547741 1.0E-06 AAATTTTAAATAAAAAG 17 V_MTATA_B_M00320 TRANSFAC + 42547729 42547745 1.0E-05 TTATTTAAAATTTGAGG 17 V_PITX2_Q2_M00482 TRANSFAC + 42547972 42547982 1.0E-06 TGTAATCCCAG 11 V_SOX21_04_M02907 TRANSFAC + 42553055 42553071 2.0E-06 AGAGAATTGTTCAAATA 17 V_IRF1_Q6_01_M01881 TRANSFAC + 42553453 42553466 1.0E-06 TCTTTTCACTTTTT 14 V_SRF_06_M02916 TRANSFAC - 42547722 42547738 3.0E-06 TTTTAAATAAAAAGGTA 17 V_SRF_06_M02916 TRANSFAC + 42548067 42548083 4.0E-06 CCTAAAAAATAAAAGCC 17 V_SRF_06_M02916 TRANSFAC + 42548068 42548084 8.0E-06 CTAAAAAATAAAAGCCA 17 V_HFH3_01_M00289 TRANSFAC + 42552945 42552957 9.0E-06 TAATGTTTATGTT 13 V_EWSR1FLI1_01_M02252 TRANSFAC + 42550052 42550069 8.0E-06 GGAAGGAAGTAAAGCATT 18 V_FOXJ2_01_M00422 TRANSFAC - 42552943 42552960 1.0E-06 AAAAACATAAACATTATG 18 V_FOXO1_04_M01969 TRANSFAC - 42553131 42553150 8.0E-06 TTAAATATCTACATGCAGAT 20 V_HLF_01_M00260 TRANSFAC - 42554129 42554138 3.0E-06 ATTACACAAT 10 V_PR_02_M00957 TRANSFAC - 42553471 42553497 2.0E-06 TGGGGGAAAACTTTCTGTTCTCAAGTT 27 V_SOX12_03_M02796 TRANSFAC + 42553058 42553071 3.0E-06 GAATTGTTCAAATA 14 V_PIT1_Q6_M00802 TRANSFAC + 42553132 42553149 1.0E-05 TCTGCATGTAGATATTTA 18 V_PIT1_Q6_M00802 TRANSFAC - 42554041 42554058 1.0E-06 TAATCATGATTGTACACA 18 V_CTF1_01_M01196 TRANSFAC - 42548431 42548444 6.0E-06 TGGCTCTAAGCCAG 14 V_ARP1_01_M00155 TRANSFAC - 42548014 42548029 2.0E-06 TGAACTCCTGAGCTCA 16 V_MEF2A_05_M01301 TRANSFAC + 42547938 42547949 6.0E-06 ACTTATTTAAAA 12 V_MEF2A_05_M01301 TRANSFAC + 42549953 42549964 9.0E-06 AGTTATAAAAAG 12 V_ELF5_04_M02241 TRANSFAC - 42550054 42550062 4.0E-06 TACTTCCTT 9 V_LHX5_01_M01353 TRANSFAC + 42547725 42547741 1.0E-05 CTTTTTATTTAAAATTT 17 V_CEBP_Q2_01_M00912 TRANSFAC - 42554127 42554138 1.0E-06 ATTACACAATCT 12 V_SOX5_07_M02909 TRANSFAC + 42553054 42553070 9.0E-06 CAGAGAATTGTTCAAAT 17 V_SOX5_07_M02909 TRANSFAC - 42553114 42553130 6.0E-06 ATAGAAATTATTGGTAA 17 V_NFYA_Q5_M02106 TRANSFAC + 42550151 42550164 1.0E-05 ATGCCAATCAGAAC 14 V_IRXB3_01_M01377 TRANSFAC - 42553129 42553145 9.0E-06 TATCTACATGCAGATAT 17 V_IRXB3_01_M01377 TRANSFAC + 42553130 42553146 9.0E-06 TATCTGCATGTAGATAT 17 V_CEBPE_01_M01772 TRANSFAC + 42554129 42554138 4.0E-06 ATTGTGTAAT 10 V_CEBPE_01_M01772 TRANSFAC - 42554129 42554138 7.0E-06 ATTACACAAT 10 V_TCF3_05_M02920 TRANSFAC + 42548065 42548079 2.0E-06 TGCCTAAAAAATAAA 15 TLX1_NFIC_MA0119.1 JASPAR - 42548431 42548444 6.0E-06 TGGCTCTAAGCCAG 14 V_FEV_01_M02269 TRANSFAC - 42553435 42553442 1.0E-05 CAGGAAAT 8 V_GLIS2_04_M02863 TRANSFAC - 42547726 42547739 9.0E-06 ATTTTAAATAAAAA 14 V_GLIS2_04_M02863 TRANSFAC - 42553111 42553124 6.0E-06 ATTATTGGTAAATA 14 V_CEBPG_Q6_01_M01869 TRANSFAC - 42554128 42554139 2.0E-06 GATTACACAATC 12 V_FOXK1_03_M02752 TRANSFAC - 42552943 42552959 3.0E-06 AAAACATAAACATTATG 17 V_AR_Q2_M00447 TRANSFAC - 42553477 42553491 1.0E-06 AAAACTTTCTGTTCT 15 V_PAX4_04_M00380 TRANSFAC - 42547712 42547741 5.0E-06 AAATTTTAAATAAAAAGGTAGTAACAGCCC 30 V_PAX4_04_M00380 TRANSFAC - 42552923 42552952 7.0E-06 AAACATTATGAAAATCATAGATATGATTTC 30 V_NANOG_02_M01247 TRANSFAC + 42554055 42554074 8.0E-06 ATTACATAAGAAAACTGGAA 20

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.