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HELQ Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 113510 helicase, POLQ-like chr4 - 84376525 - 84382025 84377025 Transcription Factor Binding Sites   Download all TFBS in the HELQ promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints Foxa2_MA0047.2 JASPAR + 84376384 84376395 1.0E-05 TATTTATATAGA 12 Foxa2_MA0047.2 JASPAR - 84376394 84376405 4.0E-06 TATTTACATTTC 12 POU2F1_POU_DBD_dimeric_14_1 SELEX + 84376378 84376391 5.0E-06 ATTTCATATTTATA 14 POU2F1_POU_DBD_dimeric_14_1 SELEX - 84376378 84376391 2.0E-06 TATAAATATGAAAT 14 ETV5_ETS_DBD_monomeric_10_1 SELEX + 84376988 84376997 9.0E-06 ACCGGAAGCA 10 FOXG1_forkhead_DBD_dimeric_17_1 SELEX + 84376389 84376405 9.0E-06 ATATAGAAATGTAAATA 17 FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 84376382 84376393 9.0E-06 TATATAAATATG 12 FOXC2_forkhead_DBD_monomeric_12_1 SELEX + 84376396 84376407 3.0E-06 AATGTAAATAAC 12 SOX8_HMG_DBD_dimeric_16_1 SELEX + 84375989 84376004 3.0E-06 TACAATCTACAGTGAC 16 Bhlhb2_bHLH_DBD_dimeric_10_1 SELEX + 84377030 84377039 9.0E-06 CTCACGTGAC 10 FOXC1_forkhead_DBD_monomeric_11_1 SELEX - 84376383 84376393 0.0E+00 TATATAAATAT 11 FOXC1_forkhead_DBD_monomeric_11_1 SELEX + 84376396 84376406 1.0E-06 AATGTAAATAA 11 ETV1_ETS_DBD_monomeric_10_1 SELEX + 84376988 84376997 7.0E-06 ACCGGAAGCA 10 RUNX3_RUNX_DBD_dimeric_16_1 SELEX - 84377244 84377259 1.0E-06 CCACCGCAAACAGCAA 16 SPIB_ETS_DBD_monomeric_14_1 SELEX + 84377522 84377535 1.0E-05 CGTATGAGGAAGTT 14 RUNX2_RUNX_DBD_dimeric_16_1 SELEX - 84377244 84377259 2.0E-06 CCACCGCAAACAGCAA 16 Foxq1_MA0040.1 JASPAR - 84376261 84376271 8.0E-06 TGCTGTTTATT 11 Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 84376258 84376268 9.0E-06 TTCAATAAACA 11 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX + 84376255 84376268 4.0E-06 GTCTTCAATAAACA 14 BHLHE41_bHLH_full_dimeric_10_1 SELEX + 84377030 84377039 7.0E-06 CTCACGTGAC 10 BHLHE41_bHLH_full_dimeric_10_1 SELEX - 84377030 84377039 7.0E-06 GTCACGTGAG 10 SREBF2_bHLH_DBD_dimeric_10_1 SELEX + 84377030 84377039 8.0E-06 CTCACGTGAC 10 HIC2_C2H2_DBD_monomeric_9_1 SELEX - 84376571 84376579 4.0E-06 ATGCCCACT 9 POU2F3_POU_DBD_dimeric_12_1 SELEX - 84376379 84376390 2.0E-06 ATAAATATGAAA 12 FOXI1_MA0042.1 JASPAR + 84376381 84376392 2.0E-06 TCATATTTATAT 12 Bhlhb2_bHLH_DBD_monomeric_10_1 SELEX + 84377030 84377039 5.0E-06 CTCACGTGAC 10 ELK4_ETS_DBD_monomeric_10_1 SELEX + 84376988 84376997 8.0E-06 ACCGGAAGCA 10 Srebf1_bHLH_DBD_dimeric_10_1 SELEX + 84377030 84377039 8.0E-06 CTCACGTGAC 10 BCL6B_C2H2_DBD_monomeric_17_1 SELEX - 84377539 84377555 5.0E-06 TGCTTTTTAAGAACCAC 17 FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 84376258 84376268 4.0E-06 TTCAATAAACA 11 POU3F1_POU_DBD_monomeric_12_1 SELEX + 84376395 84376406 4.0E-06 AAATGTAAATAA 12 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX + 84376907 84376921 9.0E-06 TGGAAGGGAGAGTGG 15 ELK1_ETS_full_monomeric_10_1 SELEX + 84376988 84376997 8.0E-06 ACCGGAAGCA 10 POU5F1P1_POU_DBD_monomeric_12_1 SELEX - 84376379 84376390 3.0E-06 ATAAATATGAAA 12 Pou5f1_MA0142.1 JASPAR + 84376390 84376404 5.0E-06 TATAGAAATGTAAAT 15 TFE3_bHLH_DBD_dimeric_10_1 SELEX + 84377030 84377039 6.0E-06 CTCACGTGAC 10 Elk3_ETS_DBD_monomeric_10_1 SELEX + 84376988 84376997 9.0E-06 ACCGGAAGCA 10 FOXB1_forkhead_full_monomeric_9_1 SELEX + 84376398 84376406 4.0E-06 TGTAAATAA 9 POU3F3_POU_DBD_dimeric_12_1 SELEX + 84376379 84376390 9.0E-06 TTTCATATTTAT 12 POU3F3_POU_DBD_dimeric_12_1 SELEX - 84376379 84376390 1.0E-06 ATAAATATGAAA 12 NRF1_NRF_full_dimeric_12_1 SELEX + 84377074 84377085 0.0E+00 TGCGCATGCGTA 12 NRF1_NRF_full_dimeric_12_1 SELEX - 84377074 84377085 0.0E+00 TACGCATGCGCA 12 POU3F2_POU_DBD_monomeric_12_1 SELEX + 84376395 84376406 9.0E-06 AAATGTAAATAA 12 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 84376397 84376409 5.0E-06 ATGTAAATAACAA 13 ARNTL_bHLH_DBD_dimeric_10_1 SELEX - 84377030 84377039 6.0E-06 GTCACGTGAG 10 FOXB1_forkhead_DBD_monomeric_11_1 SELEX - 84376383 84376393 0.0E+00 TATATAAATAT 11 FOXB1_forkhead_DBD_monomeric_11_1 SELEX + 84376396 84376406 0.0E+00 AATGTAAATAA 11 BHLHB3_bHLH_full_dimeric_10_1 SELEX + 84377030 84377039 2.0E-06 CTCACGTGAC 10 V_ERG_03_M02062 TRANSFAC + 84376988 84376997 9.0E-06 ACCGGAAGCA 10 V_HNF3B_01_M00131 TRANSFAC + 84376379 84376393 1.0E-06 TTTCATATTTATATA 15 V_SAP1A_01_M01167 TRANSFAC + 84376987 84376997 6.0E-06 GACCGGAAGCA 11 V_FREAC7_01_M00293 TRANSFAC - 84376380 84376395 0.0E+00 TCTATATAAATATGAA 16 V_ELK1_04_M01165 TRANSFAC + 84376987 84376997 4.0E-06 GACCGGAAGCA 11 V_FOXA2_04_M02749 TRANSFAC + 84376394 84376410 1.0E-06 GAAATGTAAATAACAAG 17 V_RHOX11_01_M01347 TRANSFAC - 84376259 84376275 6.0E-06 AATCTGCTGTTTATTGA 17 V_NF1_Q6_01_M00806 TRANSFAC + 84376501 84376517 1.0E-05 TGGGAAGGATGCCAAAA 17 V_EVI1_04_M00081 TRANSFAC - 84376374 84376388 3.0E-06 AAATATGAAATGTAA 15 V_NKX29_01_M01352 TRANSFAC + 84377507 84377523 4.0E-06 TTTAAAGTATTTAAACG 17 V_BCL6_01_M01183 TRANSFAC - 84377510 84377525 9.0E-06 TACGTTTAAATACTTT 16 V_CETS1_01_M01986 TRANSFAC + 84376988 84376997 4.0E-06 ACCGGAAGCA 10 V_POU5F1_02_M02245 TRANSFAC + 84376390 84376404 5.0E-06 TATAGAAATGTAAAT 15 V_HOXA13_02_M01297 TRANSFAC - 84376273 84376281 4.0E-06 AAATAAAAT 9 V_ETV3_01_M01990 TRANSFAC + 84376988 84376997 5.0E-06 ACCGGAAGCA 10 V_OCT1_Q5_01_M00930 TRANSFAC - 84376396 84376406 1.0E-06 TTATTTACATT 11 V_FOXO3A_Q1_M01137 TRANSFAC + 84376398 84376409 3.0E-06 TGTAAATAACAA 12 V_PITX3_Q2_M01735 TRANSFAC - 84377494 84377502 2.0E-06 TGGATTAGA 9 V_HNF3_Q6_01_M01012 TRANSFAC + 84376272 84376289 7.0E-06 GATTTTATTTGTACAGTA 18 V_HNF3_Q6_01_M01012 TRANSFAC - 84376393 84376410 6.0E-06 CTTGTTATTTACATTTCT 18 V_AP2_Q6_M00189 TRANSFAC + 84376811 84376822 4.0E-06 CACCCGCCGGCG 12 V_NKX24_01_M01350 TRANSFAC - 84377531 84377546 6.0E-06 AGAACCACTCCAACTT 16 V_PU1_Q4_M01172 TRANSFAC - 84377202 84377220 6.0E-06 TTCTTCCACTTCCTTTCGT 19 V_PU1_Q4_M01172 TRANSFAC - 84377523 84377541 1.0E-06 CACTCCAACTTCCTCATAC 19 V_CDX_Q5_M00991 TRANSFAC - 84376359 84376376 1.0E-05 TAAACCCCGAGACATAAA 18 V_HBP1_Q2_M01661 TRANSFAC + 84376258 84376266 4.0E-06 TTCAATAAA 9 V_MEF2A_Q6_M02024 TRANSFAC + 84376384 84376393 5.0E-06 TATTTATATA 10 V_RHOX11_02_M01384 TRANSFAC - 84376259 84376275 4.0E-06 AATCTGCTGTTTATTGA 17 V_PEA3_01_M01991 TRANSFAC + 84376988 84376997 8.0E-06 ACCGGAAGCA 10 V_ELF4_04_M02850 TRANSFAC - 84376269 84376285 2.0E-06 GTACAAATAAAATCTGC 17 V_FLI1_01_M02038 TRANSFAC + 84376988 84376997 5.0E-06 ACCGGAAGCA 10 V_ELK1_06_M02059 TRANSFAC + 84376988 84376997 7.0E-06 ACCGGAAGCA 10 V_FOXA2_02_M02853 TRANSFAC + 84376399 84376413 6.0E-06 GTAAATAACAAGGCA 15 V_SPI1_03_M02078 TRANSFAC + 84377526 84377535 6.0E-06 TGAGGAAGTT 10 V_ZFP105_03_M02827 TRANSFAC - 84376270 84376284 8.0E-06 TACAAATAAAATCTG 15 V_ZFP105_03_M02827 TRANSFAC + 84376398 84376412 1.0E-05 TGTAAATAACAAGGC 15 V_FKLF_Q5_M01837 TRANSFAC - 84376555 84376564 2.0E-06 GGGGTGGGAG 10 V_FLI1_02_M02073 TRANSFAC + 84376988 84376997 4.0E-06 ACCGGAAGCA 10 V_E2F1_01_M01250 TRANSFAC - 84377216 84377223 1.0E-05 CGTTTCTT 8 V_XFD3_01_M00269 TRANSFAC + 84376396 84376409 2.0E-06 AATGTAAATAACAA 14 V_RFX1_01_M00280 TRANSFAC - 84377423 84377439 2.0E-06 TAATCGCCTAGAAACCA 17 V_ERF_01_M01984 TRANSFAC + 84376988 84376997 7.0E-06 ACCGGAAGCA 10 V_ER81_02_M02065 TRANSFAC + 84376988 84376997 5.0E-06 ACCGGAAGCA 10 V_HOXB6_01_M01460 TRANSFAC + 84377461 84377476 2.0E-06 AATCTGTAATTGCCTT 16 V_HNF3A_01_M01261 TRANSFAC + 84376397 84376406 9.0E-06 ATGTAAATAA 10 V_HNF3_Q6_M00791 TRANSFAC - 84376275 84376287 6.0E-06 CTGTACAAATAAA 13 V_CETS2_01_M01989 TRANSFAC + 84376988 84376997 6.0E-06 ACCGGAAGCA 10 V_ELF5_01_M01197 TRANSFAC + 84377525 84377535 6.0E-06 ATGAGGAAGTT 11 V_OCT1_04_M00138 TRANSFAC - 84376378 84376400 6.0E-06 ACATTTCTATATAAATATGAAAT 23 V_OCT1_04_M00138 TRANSFAC + 84376383 84376405 1.0E-06 ATATTTATATAGAAATGTAAATA 23 V_OCT1_04_M00138 TRANSFAC - 84376384 84376406 9.0E-06 TTATTTACATTTCTATATAAATA 23 V_OCT1_04_M00138 TRANSFAC + 84376389 84376411 0.0E+00 ATATAGAAATGTAAATAACAAGG 23 V_SPIB_01_M01204 TRANSFAC + 84377522 84377538 4.0E-06 CGTATGAGGAAGTTGGA 17 V_ERBETA_Q5_M01875 TRANSFAC + 84376878 84376892 1.0E-06 TTCTCAGTGACCCAG 15 V_ZIC3_05_M02941 TRANSFAC + 84375904 84375918 7.0E-06 TAAAACAGCAGGAAG 15 V_XFD2_01_M00268 TRANSFAC + 84376259 84376272 9.0E-06 TCAATAAACAGCAG 14 V_XFD2_01_M00268 TRANSFAC - 84376380 84376393 1.0E-06 TATATAAATATGAA 14 V_XFD2_01_M00268 TRANSFAC + 84376396 84376409 6.0E-06 AATGTAAATAACAA 14 V_CETS1P54_01_M00032 TRANSFAC + 84376988 84376997 6.0E-06 ACCGGAAGCA 10 V_STAT4_Q5_M02117 TRANSFAC - 84375957 84375966 6.0E-06 TTATCAGAAA 10 V_TBP_06_M02814 TRANSFAC + 84376380 84376395 1.0E-06 TTCATATTTATATAGA 16 V_TBP_06_M02814 TRANSFAC - 84376380 84376395 3.0E-06 TCTATATAAATATGAA 16 V_TBP_06_M02814 TRANSFAC + 84376382 84376397 7.0E-06 CATATTTATATAGAAA 16 V_TBP_06_M02814 TRANSFAC - 84376382 84376397 1.0E-06 TTTCTATATAAATATG 16 V_PEA3_02_M02066 TRANSFAC + 84376988 84376997 8.0E-06 ACCGGAAGCA 10 V_ERF_02_M02061 TRANSFAC + 84376988 84376997 5.0E-06 ACCGGAAGCA 10 V_MZF1_02_M00084 TRANSFAC - 84376724 84376736 8.0E-06 AGATGAGGGGAAA 13 V_OCT_Q6_M00795 TRANSFAC - 84376396 84376406 2.0E-06 TTATTTACATT 11 V_NKX23_01_M01457 TRANSFAC + 84377507 84377522 7.0E-06 TTTAAAGTATTTAAAC 16 V_ER71_01_M01988 TRANSFAC + 84376988 84376997 7.0E-06 ACCGGAAGCA 10 V_ELK1_01_M00007 TRANSFAC + 84376985 84377000 7.0E-06 CGGACCGGAAGCACGC 16 V_SOX17_04_M02904 TRANSFAC + 84376831 84376847 2.0E-06 AACCACATTCATCCATG 17 V_HOXD9_Q2_M01834 TRANSFAC - 84376274 84376283 8.0E-06 ACAAATAAAA 10 V_HOXD9_Q2_M01834 TRANSFAC - 84376358 84376367 4.0E-06 AGACATAAAA 10 V_ER81_01_M01987 TRANSFAC + 84376988 84376997 6.0E-06 ACCGGAAGCA 10 V_NEUROD_02_M01288 TRANSFAC - 84375906 84375917 4.0E-06 TTCCTGCTGTTT 12 V_FREAC2_01_M00290 TRANSFAC + 84376394 84376409 4.0E-06 GAAATGTAAATAACAA 16 V_ELF1_Q6_M00746 TRANSFAC - 84376710 84376721 7.0E-06 GGAGGAGGAAAT 12 V_ELF1_Q6_M00746 TRANSFAC + 84377523 84377534 3.0E-06 GTATGAGGAAGT 12 V_HFH8_01_M00294 TRANSFAC + 84376381 84376393 9.0E-06 TCATATTTATATA 13 V_ZFP105_04_M02931 TRANSFAC - 84377508 84377524 6.0E-06 ACGTTTAAATACTTTAA 17 V_MTF1_06_M02882 TRANSFAC - 84376375 84376388 2.0E-06 AAATATGAAATGTA 14 V_TBP_01_M00471 TRANSFAC - 84376384 84376391 4.0E-06 TATAAATA 8 V_STRA13_01_M00985 TRANSFAC + 84377028 84377041 1.0E-06 GCCTCACGTGACCT 14 V_OCT1_Q6_M00195 TRANSFAC + 84376393 84376407 0.0E+00 AGAAATGTAAATAAC 15 V_FOXL1_04_M02753 TRANSFAC + 84376394 84376410 0.0E+00 GAAATGTAAATAACAAG 17 V_NKX3A_02_M01383 TRANSFAC - 84377506 84377522 7.0E-06 GTTTAAATACTTTAAAG 17 V_NKX3A_02_M01383 TRANSFAC + 84377507 84377523 4.0E-06 TTTAAAGTATTTAAACG 17 V_E2F6_01_M01252 TRANSFAC - 84377216 84377223 1.0E-05 CGTTTCTT 8 V_RHOX11_05_M03099 TRANSFAC - 84376259 84376275 4.0E-06 AATCTGCTGTTTATTGA 17 V_ZFP206_01_M01742 TRANSFAC + 84377074 84377084 2.0E-06 TGCGCATGCGT 11 V_ZFP206_01_M01742 TRANSFAC - 84377075 84377085 6.0E-06 TACGCATGCGC 11 V_TCF4_Q5_M00671 TRANSFAC + 84377135 84377142 1.0E-05 CCTTTGAA 8 V_MSX1_01_M00394 TRANSFAC + 84377464 84377472 7.0E-06 CTGTAATTG 9 V_SPIC_02_M02077 TRANSFAC + 84377526 84377535 3.0E-06 TGAGGAAGTT 10 V_FOXA2_03_M02260 TRANSFAC + 84376384 84376395 1.0E-05 TATTTATATAGA 12 V_FOXA2_03_M02260 TRANSFAC - 84376394 84376405 4.0E-06 TATTTACATTTC 12 V_NRF1_Q6_M00652 TRANSFAC - 84377074 84377083 2.0E-06 CGCATGCGCA 10 V_ETS1_B_M00339 TRANSFAC - 84376704 84376718 9.0E-06 GGAGGAAATGGTGGC 15 V_SAP1A_03_M02058 TRANSFAC + 84376988 84376997 5.0E-06 ACCGGAAGCA 10 V_SOX14_04_M02901 TRANSFAC + 84377449 84377465 0.0E+00 AAGATGGGTGGGAATCT 17 V_HFH3_01_M00289 TRANSFAC - 84376259 84376271 9.0E-06 TGCTGTTTATTGA 13 V_HFH3_01_M00289 TRANSFAC + 84376381 84376393 1.0E-06 TCATATTTATATA 13 V_HFH3_01_M00289 TRANSFAC - 84376396 84376408 8.0E-06 TGTTATTTACATT 13 V_FOXJ2_01_M00422 TRANSFAC + 84376256 84376273 3.0E-06 TCTTCAATAAACAGCAGA 18 V_FOXJ2_01_M00422 TRANSFAC - 84376379 84376396 1.0E-06 TTCTATATAAATATGAAA 18 V_E4F1_Q6_M00694 TRANSFAC - 84376580 84376589 5.0E-06 CCTACGTCAC 10 V_ERG_02_M01985 TRANSFAC + 84376988 84376997 6.0E-06 ACCGGAAGCA 10 V_PIT1_Q6_M00802 TRANSFAC + 84376378 84376395 0.0E+00 ATTTCATATTTATATAGA 18 V_BARX1_01_M01340 TRANSFAC - 84377461 84377476 9.0E-06 AAGGCAATTACAGATT 16 V_ELK1_03_M01163 TRANSFAC + 84376664 84376674 1.0E-05 AACCGGCAGTA 11 V_RHOX11_06_M03100 TRANSFAC - 84376259 84376275 6.0E-06 AATCTGCTGTTTATTGA 17 V_GLIS2_04_M02863 TRANSFAC + 84376382 84376395 6.0E-06 CATATTTATATAGA 14 V_ER71_02_M02067 TRANSFAC + 84376988 84376997 7.0E-06 ACCGGAAGCA 10 V_FOXK1_03_M02752 TRANSFAC + 84376394 84376410 0.0E+00 GAAATGTAAATAACAAG 17 V_ZIC1_05_M02939 TRANSFAC + 84375904 84375918 9.0E-06 TAAAACAGCAGGAAG 15 V_SPIB_03_M02076 TRANSFAC + 84377526 84377535 2.0E-06 TGAGGAAGTT 10 V_ETV3_02_M02068 TRANSFAC + 84376988 84376997 5.0E-06 ACCGGAAGCA 10 V_NANOG_02_M01247 TRANSFAC + 84376398 84376417 6.0E-06 TGTAAATAACAAGGCAATCA 20 V_NKX21_01_M01312 TRANSFAC - 84377531 84377546 9.0E-06 AGAACCACTCCAACTT 16 V_OCT4_01_M01125 TRANSFAC + 84376390 84376404 0.0E+00 TATAGAAATGTAAAT 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.