Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

CHRNA2


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
1135 cholinergic receptor, nicotinic, alpha 2 (neuronal) chr8 -27336313 - 27341813 27336813

Transcription Factor Binding Sites

 
Download all TFBS in the CHRNA2 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
FOXO4_forkhead_DBD_dimeric_14_1 SELEX + 27340885 27340898 5.0E-06 GAAAACTGGTTTAC 14
SOX9_HMG_full_dimeric_16_1 SELEX + 27340985 27341000 7.0E-06 AACATTTTTCATTGGT 16
SOX8_HMG_DBD_dimeric_16_1 SELEX + 27340985 27341000 4.0E-06 AACATTTTTCATTGGT 16
Tp53_p53l_DBD_dimeric_18_2 SELEX + 27340816 27340833 5.0E-06 CACCTGCCAGGACATGTA 18
Tp53_p53l_DBD_dimeric_18_2 SELEX - 27340816 27340833 7.0E-06 TACATGTCCTGGCAGGTG 18
GRHL1_CP2_full_dimeric_12_1 SELEX + 27340886 27340897 1.0E-06 AAAACTGGTTTA 12
GRHL1_CP2_full_dimeric_12_1 SELEX - 27340886 27340897 2.0E-06 TAAACCAGTTTT 12
TEAD1_TEA_full_monomeric_10_1 SELEX - 27337076 27337085 3.0E-06 TACATTCCAA 10
TFCP2_CP2_full_dimeric_10_1 SELEX + 27340887 27340896 4.0E-06 AAACTGGTTT 10
TFCP2_CP2_full_dimeric_10_1 SELEX - 27340887 27340896 3.0E-06 AAACCAGTTT 10
SOX7_HMG_full_dimeric_16_1 SELEX + 27340985 27341000 1.0E-06 AACATTTTTCATTGGT 16
SOX7_HMG_full_dimeric_16_1 SELEX - 27340985 27341000 2.0E-06 ACCAATGAAAAATGTT 16
TEAD3_TEA_DBD_monomeric_8_1 SELEX - 27337077 27337084 1.0E-05 ACATTCCA 8
GRHL1_CP2_DBD_dimeric_10_1 SELEX - 27340887 27340896 5.0E-06 AAACCAGTTT 10
FOXO3_forkhead_full_dimeric_14_1 SELEX + 27340885 27340898 6.0E-06 GAAAACTGGTTTAC 14
TEAD4_TEA_DBD_monomeric_10_1 SELEX - 27337076 27337085 8.0E-06 TACATTCCAA 10
TBX1_TBX_DBD_dimeric_20_1 SELEX - 27336753 27336772 4.0E-06 GTGTGTGAGAGAGAGAGAGA 20
TEAD1_MA0090.1 JASPAR - 27337074 27337085 8.0E-06 TACATTCCAAGG 12
V_FOXP1_01_M00987 TRANSFAC - 27336781 27336800 5.0E-06 GTGTGTGTGTGTGTGTGTAT 20
V_AP1_Q2_M00173 TRANSFAC - 27337093 27337103 7.0E-06 ACTGACTTAGA 11
V_AR_02_M00953 TRANSFAC + 27336735 27336761 5.0E-06 CACACAGGCTCACGCTGTTCTCTCTCT 27
V_OSF2_Q6_M00731 TRANSFAC + 27340747 27340754 1.0E-05 ACCACAAA 8
V_ALX4_01_M00619 TRANSFAC - 27340790 27340802 7.0E-06 CCTGAGAAGAAAC 13
V_FOXA2_04_M02749 TRANSFAC - 27337079 27337095 9.0E-06 AGAAGGTAAATACATTC 17
V_MAFB_05_M02775 TRANSFAC - 27337093 27337109 5.0E-06 CTATTTACTGACTTAGA 17
V_AR_Q6_01_M01996 TRANSFAC - 27337060 27337074 5.0E-06 GTTCTTCAAGTTCTT 15
V_IRF_Q6_01_M00972 TRANSFAC + 27340977 27340987 3.0E-06 GAAAGAGAAAC 11
V_NKX24_01_M01350 TRANSFAC + 27337016 27337031 4.0E-06 GAATCCACTTCACAAA 16
V_NKX24_01_M01350 TRANSFAC + 27340674 27340689 9.0E-06 AACTCCACTTCAACTT 16
V_GM497_04_M02864 TRANSFAC + 27336722 27336737 9.0E-06 CTCAGCACACAAGCAC 16
V_AR_03_M00956 TRANSFAC + 27336735 27336761 1.0E-05 CACACAGGCTCACGCTGTTCTCTCTCT 27
V_PR_Q2_M00960 TRANSFAC - 27336749 27336758 7.0E-06 GAGAGAACAG 10
V_E2F1_01_M01250 TRANSFAC + 27340789 27340796 1.0E-05 CGTTTCTT 8
V_TTF1_Q6_M00794 TRANSFAC + 27340707 27340718 4.0E-06 ACCTCAAGAGTC 12
V_AR_04_M01201 TRANSFAC + 27336741 27336755 7.0E-06 GGCTCACGCTGTTCT 15
V_GRE_C_M00205 TRANSFAC + 27336741 27336756 8.0E-06 GGCTCACGCTGTTCTC 16
V_TEF_01_M01305 TRANSFAC - 27337074 27337085 8.0E-06 TACATTCCAAGG 12
V_NKX25_03_M01414 TRANSFAC + 27340674 27340689 8.0E-06 AACTCCACTTCAACTT 16
V_E2F6_01_M01252 TRANSFAC + 27340789 27340796 1.0E-05 CGTTTCTT 8
V_AIRE_01_M00999 TRANSFAC + 27340989 27341014 2.0E-06 TTTTTCATTGGTAAGGAAGGCTCCAT 26
V_FPM315_01_M01587 TRANSFAC + 27336820 27336831 2.0E-06 GAAGGAGGAGGA 12
V_PLZF_02_M01075 TRANSFAC - 27337073 27337101 9.0E-06 TGACTTAGAAGGTAAATACATTCCAAGGT 29
V_IRF1_Q6_01_M01881 TRANSFAC - 27340976 27340989 4.0E-06 ATGTTTCTCTTTCT 14
V_DMRT2_01_M01147 TRANSFAC + 27340977 27340992 2.0E-06 GAAAGAGAAACATTTT 16
V_NKX21_01_M01312 TRANSFAC + 27337016 27337031 9.0E-06 GAATCCACTTCACAAA 16
V_OCT4_01_M01125 TRANSFAC + 27341018 27341032 6.0E-06 ATTTATCATGGAAAC 15
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL