Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

ADC Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 113451 arginine decarboxylase chr1 + 33541713 - 33547213 33546713 Transcription Factor Binding Sites   Download all TFBS in the ADC promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints RFX4_RFX_DBD_dimeric_16_1 SELEX + 33546659 33546674 2.0E-06 GGTTGCCAGGGCTACG 16 RFX4_RFX_DBD_dimeric_16_1 SELEX - 33546659 33546674 1.0E-06 CGTAGCCCTGGCAACC 16 CEBPD_bZIP_DBD_dimeric_10_1 SELEX - 33551150 33551159 2.0E-06 ATTACGCAAC 10 TEF_bZIP_DBD_dimeric_12_1 SELEX - 33551149 33551160 1.0E-05 TATTACGCAACC 12 CEBPG_bZIP_full_dimeric_10_1 SELEX - 33551150 33551159 2.0E-06 ATTACGCAAC 10 HLF_bZIP_full_dimeric_12_1 SELEX - 33551149 33551160 6.0E-06 TATTACGCAACC 12 NFYA_MA0060.1 JASPAR + 33546634 33546649 4.0E-06 ATCGACCAATGGGATG 16 Creb5_bZIP_DBD_dimeric_12_1 SELEX + 33543942 33543953 5.0E-06 AATGACATCACA 12 JDP2_bZIP_full_dimeric_12_1 SELEX + 33543942 33543953 9.0E-06 AATGACATCACA 12 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX - 33546346 33546355 1.0E-06 TGTAATAAAA 10 Rfx3_RFX_DBD_dimeric_16_1 SELEX + 33546659 33546674 3.0E-06 GGTTGCCAGGGCTACG 16 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 33546659 33546674 8.0E-06 CGTAGCCCTGGCAACC 16 POU3F3_POU_DBD_monomeric_13_1 SELEX + 33549976 33549988 9.0E-06 GATTTGCAAATTT 13 CEBPB_bZIP_full_dimeric_10_1 SELEX - 33551150 33551159 2.0E-06 ATTACGCAAC 10 HOXC11_homeodomain_full_monomeric_11_2 SELEX - 33546345 33546355 4.0E-06 TGTAATAAAAT 11 SP4_C2H2_full_monomeric_17_1 SELEX - 33546699 33546715 3.0E-06 CAGGCCCCGCCCATAGT 17 NFIL3_bZIP_DBD_dimeric_12_1 SELEX - 33551149 33551160 1.0E-05 TATTACGCAACC 12 RFX2_RFX_DBD_dimeric_16_1 SELEX + 33546659 33546674 5.0E-06 GGTTGCCAGGGCTACG 16 RFX2_RFX_DBD_dimeric_16_1 SELEX - 33546659 33546674 3.0E-06 CGTAGCCCTGGCAACC 16 RFX5_RFX_DBD_dimeric_16_3 SELEX - 33546659 33546674 3.0E-06 CGTAGCCCTGGCAACC 16 HLF_MA0043.1 JASPAR + 33551149 33551160 6.0E-06 GGTTGCGTAATA 12 ZNF410_C2H2_DBD_monomeric_17_1 SELEX + 33543945 33543961 2.0E-06 GACATCACATAACAAGC 17 CEBPE_bZIP_DBD_dimeric_10_1 SELEX - 33551150 33551159 2.0E-06 ATTACGCAAC 10 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX - 33546345 33546355 2.0E-06 TGTAATAAAAT 11 HOXA10_homeodomain_DBD_monomeric_11_1 SELEX - 33546345 33546355 1.0E-06 TGTAATAAAAT 11 Zfx_MA0146.1 JASPAR - 33546991 33547004 3.0E-06 GGAGCCGAGGCCTC 14 V_HOXA9_01_M01351 TRANSFAC - 33546341 33546357 9.0E-06 TTTGTAATAAAATTCTT 17 V_AR_02_M00953 TRANSFAC + 33549997 33550023 9.0E-06 CAGAGCTATACATGATGTTCTTCTAAT 27 V_ISL1_Q6_M01127 TRANSFAC + 33551153 33551161 4.0E-06 GCGTAATAT 9 V_NF1_Q6_01_M00806 TRANSFAC - 33549989 33550005 1.0E-05 ATAGCTCTGTGCCAAAC 17 V_CEBP_Q3_M00770 TRANSFAC - 33546350 33546361 5.0E-06 TACTTTTGTAAT 12 V_ZFX_01_M01593 TRANSFAC + 33546786 33546801 5.0E-06 GCGCAGGCCGCGGGAC 16 V_RORA1_01_M00156 TRANSFAC + 33547038 33547050 1.0E-05 GTTTCGAGGTCAC 13 V_ERR3_Q2_01_M02094 TRANSFAC + 33547039 33547051 8.0E-06 TTTCGAGGTCACC 13 V_MAFB_03_M02879 TRANSFAC - 33546345 33546359 9.0E-06 CTTTTGTAATAAAAT 15 V_IRF_Q6_01_M00972 TRANSFAC + 33543966 33543976 6.0E-06 AAAAAAGAAAA 11 V_AP2_Q6_01_M00915 TRANSFAC - 33546911 33546923 1.0E-05 GGCTCCCCAGGCC 13 V_HOXD13_01_M01404 TRANSFAC - 33546342 33546357 1.0E-06 TTTGTAATAAAATTCT 16 V_NFY_Q6_01_M00775 TRANSFAC + 33546633 33546645 9.0E-06 AATCGACCAATGG 13 V_CDX_Q5_M00991 TRANSFAC + 33546349 33546366 0.0E+00 TATTACAAAAGTAATACA 18 V_RPC155_01_M01798 TRANSFAC - 33547348 33547363 3.0E-06 GCTTAAGTTCGAGTCC 16 V_GC_01_M00255 TRANSFAC + 33546701 33546714 1.0E-06 TATGGGCGGGGCCT 14 V_SOX7_03_M02807 TRANSFAC + 33546345 33546366 4.0E-06 ATTTTATTACAAAAGTAATACA 22 V_PR_01_M00954 TRANSFAC + 33549997 33550023 2.0E-06 CAGAGCTATACATGATGTTCTTCTAAT 27 V_OCT1_03_M00137 TRANSFAC - 33546345 33546357 1.0E-05 TTTGTAATAAAAT 13 V_HOXB13_01_M01467 TRANSFAC - 33546342 33546357 1.0E-05 TTTGTAATAAAATTCT 16 V_ZFP410_03_M02832 TRANSFAC + 33546638 33546654 4.0E-06 ACCAATGGGATGGCGGC 17 V_CEBPB_02_M00117 TRANSFAC - 33551148 33551161 1.0E-05 ATATTACGCAACCA 14 V_CDX2_01_M01449 TRANSFAC - 33546343 33546358 1.0E-06 TTTTGTAATAAAATTC 16 V_EVI1_01_M00078 TRANSFAC + 33546586 33546601 7.0E-06 GGAGAAGACTACAGTA 16 V_CDX2_Q5_M00729 TRANSFAC + 33546342 33546355 0.0E+00 AGAATTTTATTACA 14 V_CDX1_01_M01373 TRANSFAC - 33546343 33546358 1.0E-06 TTTTGTAATAAAATTC 16 V_OCAB_Q6_M02113 TRANSFAC - 33549976 33549986 0.0E+00 ATTTGCAAATC 11 V_KLF7_03_M02773 TRANSFAC - 33546700 33546715 8.0E-06 CAGGCCCCGCCCATAG 16 V_BLIMP1_Q6_M01066 TRANSFAC - 33546840 33546855 3.0E-06 CAGGGAGTGAATCGGA 16 V_HBP1_04_M02866 TRANSFAC - 33543887 33543903 2.0E-06 TGTTCTCATTTTACAGA 17 V_MTF1_06_M02882 TRANSFAC + 33543966 33543979 1.0E-06 AAAAAAGAAAAAGC 14 V_AP4_01_M00005 TRANSFAC + 33546728 33546745 2.0E-06 TAAGCCAGCGGCGGGCGG 18 V_CEBPA_01_M00116 TRANSFAC + 33546348 33546361 2.0E-06 TTATTACAAAAGTA 14 V_CEBPA_01_M00116 TRANSFAC - 33551148 33551161 6.0E-06 ATATTACGCAACCA 14 V_ATF1_03_M02738 TRANSFAC - 33543940 33543955 8.0E-06 TATGTGATGTCATTGA 16 V_TCF7_04_M02921 TRANSFAC + 33546346 33546360 2.0E-06 TTTTATTACAAAAGT 15 V_NFY_01_M00287 TRANSFAC + 33546634 33546649 4.0E-06 ATCGACCAATGGGATG 16 V_BDP1_01_M01796 TRANSFAC + 33547348 33547359 5.0E-06 GGACTCGAACTT 12 V_MYB_Q3_M00773 TRANSFAC - 33547006 33547016 4.0E-06 AGTGGCAGTTG 11 V_PLZF_02_M01075 TRANSFAC - 33546334 33546362 0.0E+00 TTACTTTTGTAATAAAATTCTTTTTATTT 29 V_T3RBETA_Q6_01_M02119 TRANSFAC + 33546357 33546373 8.0E-06 AAGTAATACAAGGACAT 17 V_IRF1_Q6_01_M01881 TRANSFAC - 33543965 33543978 8.0E-06 CTTTTTCTTTTTTC 14 V_SATB1_01_M01232 TRANSFAC - 33546348 33546359 7.0E-06 CTTTTGTAATAA 12 V_HLF_01_M00260 TRANSFAC + 33551150 33551159 1.0E-05 GTTGCGTAAT 10 V_SOX12_03_M02796 TRANSFAC - 33543894 33543907 5.0E-06 CATTTGTTCTCATT 14 V_SOX15_04_M02903 TRANSFAC + 33543939 33543953 9.0E-06 TTCAATGACATCACA 15 V_CEBP_Q2_01_M00912 TRANSFAC + 33546350 33546361 9.0E-06 ATTACAAAAGTA 12 V_HOXA10_01_M01464 TRANSFAC - 33546342 33546357 0.0E+00 TTTGTAATAAAATTCT 16 V_SP1_Q4_01_M00932 TRANSFAC + 33546701 33546713 8.0E-06 TATGGGCGGGGCC 13 V_HOXD10_01_M01375 TRANSFAC - 33546341 33546357 1.0E-06 TTTGTAATAAAATTCTT 17 V_TCF11MAFG_01_M00284 TRANSFAC + 33546393 33546414 4.0E-06 GAGAGATGAGTGAGCAGTTCCT 22 V_CEBPE_01_M01772 TRANSFAC - 33551150 33551159 7.0E-06 ATTACGCAAC 10 V_TCF3_05_M02920 TRANSFAC + 33543962 33543976 7.0E-06 AGGGAAAAAAGAAAA 15 V_ATATA_B_M00311 TRANSFAC + 33546723 33546732 4.0E-06 TTATATAAGC 10 V_GLIS2_04_M02863 TRANSFAC + 33546347 33546360 2.0E-06 TTTATTACAAAAGT 14 V_RFX1_02_M00281 TRANSFAC - 33546658 33546675 5.0E-06 CCGTAGCCCTGGCAACCG 18 V_NF1_Q6_M00193 TRANSFAC + 33549989 33550006 1.0E-05 GTTTGGCACAGAGCTATA 18 V_CEBPA_Q6_M01866 TRANSFAC - 33546349 33546361 6.0E-06 TACTTTTGTAATA 13

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.