Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

TMEM106A Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 113277 transmembrane protein 106A chr17 + 41358893 - 41364393 41363893 Transcription Factor Binding Sites   Download all TFBS in the TMEM106A promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints LBX2_homeodomain_DBD_dimeric_13_1 SELEX - 41363562 41363574 5.0E-06 ATCAACCCAATTA 13 NF-kappaB_MA0061.1 JASPAR + 41363843 41363852 6.0E-06 GGGACTTCCC 10 SOX10_HMG_full_dimeric_16_1 SELEX - 41365011 41365026 3.0E-06 ACCAAAGTTCAGTGCT 16 SOX9_HMG_full_dimeric_16_1 SELEX - 41365011 41365026 1.0E-05 ACCAAAGTTCAGTGCT 16 FOXL1_forkhead_full_dimeric_13_1 SELEX + 41363463 41363475 8.0E-06 CTTAAATAAACCA 13 STAT1_MA0137.2 JASPAR - 41363689 41363703 9.0E-06 AATTTCCAAGAACAT 15 MSX1_homeodomain_full_monomeric_8_1 SELEX + 41368811 41368818 7.0E-06 CCAATTAA 8 NR2F1_MA0017.1 JASPAR + 41365016 41365029 1.0E-06 TGAACTTTGGTCTT 14 TCF7L1_HMG_full_monomeric_12_1 SELEX - 41365019 41365030 5.0E-06 AAAGACCAAAGT 12 RORA_nuclearreceptor_DBD_dimeric_19_1 SELEX - 41368799 41368817 7.0E-06 TAATTGGGTCCCTAAGCCA 19 MSX2_homeodomain_DBD_monomeric_8_1 SELEX + 41368811 41368818 7.0E-06 CCAATTAA 8 EOMES_TBX_DBD_monomeric_13_1 SELEX - 41364105 41364117 5.0E-06 AAGGTGTGACTTC 13 Sox17_HMG_DBD_dimeric_15_2 SELEX - 41363453 41363467 4.0E-06 TTAAGTAGCATTCAG 15 HOXD8_homeodomain_DBD_monomeric_10_1 SELEX + 41364736 41364745 9.0E-06 AAAAATTAAA 10 HNF4A_nuclearreceptor_full_dimeric_16_1 SELEX - 41365014 41365029 2.0E-06 AAGACCAAAGTTCAGT 16 RFX3_RFX_DBD_dimeric_15_1 SELEX - 41368836 41368850 4.0E-06 ATTTGCTAAGCAATC 15 FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 41363464 41363474 1.0E-05 TTAAATAAACC 11 HNF4A_nuclearreceptor_full_dimeric_15_1 SELEX - 41365015 41365029 2.0E-06 AAGACCAAAGTTCAG 15 PRDM4_C2H2_full_monomeric_13_1 SELEX - 41364080 41364092 2.0E-06 TTTCAAGTCCCAC 13 BSX_homeodomain_DBD_monomeric_8_1 SELEX + 41368811 41368818 7.0E-06 CCAATTAA 8 TBX21_TBX_full_monomeric_10_1 SELEX - 41364108 41364117 8.0E-06 AAGGTGTGAC 10 Foxd3_MA0041.1 JASPAR - 41363683 41363694 7.0E-06 GAACATTTATTT 12 Msx3_homeodomain_DBD_monomeric_8_1 SELEX + 41368811 41368818 7.0E-06 CCAATTAA 8 POU3F1_POU_DBD_monomeric_12_2 SELEX - 41363504 41363515 9.0E-06 TTAAATAATGAA 12 Myf_MA0055.1 JASPAR - 41363997 41364008 1.0E-05 CGGCAACAGGAG 12 HNF4A_MA0114.1 JASPAR - 41365016 41365028 0.0E+00 AGACCAAAGTTCA 13 TBX20_TBX_DBD_monomeric_15_1 SELEX - 41364106 41364120 3.0E-06 GAGAAGGTGTGACTT 15 HNF4A_nuclearreceptor_full_dimeric_14_1 SELEX - 41365016 41365029 5.0E-06 AAGACCAAAGTTCA 14 MAFK_bZIP_full_monomeric_12_1 SELEX - 41364717 41364728 8.0E-06 AAAGTTGCTGAG 12 POU3F3_POU_DBD_dimeric_12_1 SELEX - 41363504 41363515 8.0E-06 TTAAATAATGAA 12 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 41363462 41363474 8.0E-06 ACTTAAATAAACC 13 RREB1_MA0073.1 JASPAR - 41363561 41363580 3.0E-06 CCACCCATCAACCCAATTAC 20 V_E2A_Q6_01_M02088 TRANSFAC + 41366294 41366306 1.0E-05 GGCCACCTGGTGG 13 V_STAT5A_Q6_M01890 TRANSFAC - 41363692 41363704 2.0E-06 GAATTTCCAAGAA 13 V_NFKB_Q6_01_M00774 TRANSFAC + 41363692 41363707 2.0E-06 TTCTTGGAAATTCCTA 16 V_BTEB3_Q5_M01865 TRANSFAC - 41364091 41364103 1.0E-06 TTAAGGGAGGATT 13 V_BCL6_01_M01183 TRANSFAC + 41363508 41363523 8.0E-06 TTATTTAAAACGTTTT 16 V_HOXA13_02_M01297 TRANSFAC + 41363466 41363474 3.0E-06 AAATAAACC 9 V_GLI1_Q2_M01042 TRANSFAC + 41364887 41364896 3.0E-06 GACCACCCAG 10 V_NKX25_Q6_M02108 TRANSFAC + 41366285 41366295 8.0E-06 GTCACTTGAGG 11 V_EAR2_Q2_M01728 TRANSFAC + 41365016 41365029 4.0E-06 TGAACTTTGGTCTT 14 V_AP2_Q6_01_M00915 TRANSFAC + 41364261 41364273 4.0E-06 CCGGCCCCAGGCG 13 V_STAT5B_01_M00459 TRANSFAC + 41363689 41363703 2.0E-06 ATGTTCTTGGAAATT 15 V_STAT5B_01_M00459 TRANSFAC - 41363689 41363703 5.0E-06 AATTTCCAAGAACAT 15 V_HNF4A_03_M02220 TRANSFAC - 41365016 41365028 0.0E+00 AGACCAAAGTTCA 13 V_NKX24_01_M01350 TRANSFAC + 41363456 41363471 7.0E-06 AATGCTACTTAAATAA 16 V_PPAR_DR1_Q2_M00763 TRANSFAC + 41365016 41365028 4.0E-06 TGAACTTTGGTCT 13 V_COUPTF_Q6_M01036 TRANSFAC + 41365011 41365033 4.0E-06 AGCACTGAACTTTGGTCTTTTCT 23 V_LHX3A_01_M00510 TRANSFAC - 41364737 41364746 7.0E-06 ATTTAATTTT 10 V_EVX1_01_M01475 TRANSFAC + 41365028 41365044 7.0E-06 TTTTCTCATTAGTGAAA 17 V_NKX62_Q2_M00489 TRANSFAC + 41363682 41363693 1.0E-05 GAAATAAATGTT 12 V_MEF2A_Q6_M02024 TRANSFAC + 41363509 41363518 5.0E-06 TATTTAAAAC 10 V_BARBIE_01_M00238 TRANSFAC + 41363862 41363876 6.0E-06 AGTCAAAGCTTGAGG 15 V_NFY_C_M00209 TRANSFAC + 41368833 41368846 7.0E-06 CCTGATTGCTTAGC 14 V_GLI3_02_M01704 TRANSFAC + 41364887 41364897 4.0E-06 GACCACCCAGT 11 V_ZNF219_01_M01122 TRANSFAC + 41364030 41364041 1.0E-05 CGCCCCCCGCAC 12 V_HELIOSA_02_M01004 TRANSFAC - 41364503 41364513 6.0E-06 ACTAGGAAAAC 11 V_EN1_02_M01365 TRANSFAC + 41368806 41368821 6.0E-06 GGGACCCAATTAATAC 16 V_MYF_01_M01302 TRANSFAC - 41363997 41364008 1.0E-05 CGGCAACAGGAG 12 V_TGIF_02_M01346 TRANSFAC + 41364706 41364722 5.0E-06 CTGAATGACAGCTCAGC 17 V_ZIC3_01_M00450 TRANSFAC - 41364887 41364895 6.0E-06 TGGGTGGTC 9 V_LMX1_01_M01409 TRANSFAC - 41363503 41363519 8.0E-06 CGTTTTAAATAATGAAC 17 V_PR_01_M00954 TRANSFAC + 41363675 41363701 9.0E-06 GAATGGTGAAATAAATGTTCTTGGAAA 27 V_HNF4_01_B_M00411 TRANSFAC - 41365015 41365029 2.0E-06 AAGACCAAAGTTCAG 15 V_COUP_01_M00158 TRANSFAC + 41365016 41365029 1.0E-06 TGAACTTTGGTCTT 14 V_IRX4_01_M01410 TRANSFAC + 41363649 41363665 5.0E-06 TATGTACTTGTACATAA 17 V_NKX25_Q5_M01043 TRANSFAC + 41366284 41366293 3.0E-06 TGTCACTTGA 10 V_MATH1_Q2_M01716 TRANSFAC + 41366296 41366305 9.0E-06 CCACCTGGTG 10 V_GR_01_M00955 TRANSFAC + 41363675 41363701 4.0E-06 GAATGGTGAAATAAATGTTCTTGGAAA 27 V_PIT1_01_M01465 TRANSFAC + 41363502 41363518 6.0E-06 CGTTCATTATTTAAAAC 17 V_GR_Q6_M00192 TRANSFAC + 41363679 41363697 9.0E-06 GGTGAAATAAATGTTCTTG 19 V_ZIC1_01_M00448 TRANSFAC - 41364887 41364895 6.0E-06 TGGGTGGTC 9 V_HNF4A_Q6_01_M02016 TRANSFAC - 41365013 41365027 0.0E+00 GACCAAAGTTCAGTG 15 V_HNF4_DR1_Q3_M00764 TRANSFAC + 41365016 41365028 3.0E-06 TGAACTTTGGTCT 13 V_TBP_06_M02814 TRANSFAC + 41363505 41363520 5.0E-06 TCATTATTTAAAACGT 16 V_TGIF1_01_M03111 TRANSFAC + 41364706 41364722 5.0E-06 CTGAATGACAGCTCAGC 17 V_IRX3_01_M01318 TRANSFAC + 41363649 41363665 9.0E-06 TATGTACTTGTACATAA 17 V_LHX3b_01_M01971 TRANSFAC - 41364737 41364746 5.0E-06 ATTTAATTTT 10 V_IRX5_01_M01472 TRANSFAC + 41363649 41363665 7.0E-06 TATGTACTTGTACATAA 17 V_NKX32_02_M01482 TRANSFAC + 41363661 41363677 9.0E-06 CATAACCACCTAAAGAA 17 V_GLI3_01_M01596 TRANSFAC - 41364886 41364896 4.0E-06 CTGGGTGGTCA 11 V_IRX3_02_M01485 TRANSFAC + 41363649 41363665 8.0E-06 TATGTACTTGTACATAA 17 V_HOXA7_02_M01336 TRANSFAC - 41363503 41363519 6.0E-06 CGTTTTAAATAATGAAC 17 V_NFYC_Q5_M02107 TRANSFAC - 41363558 41363571 7.0E-06 AACCCAATTACACC 14 V_BRN4_01_M01473 TRANSFAC + 41363502 41363518 6.0E-06 CGTTCATTATTTAAAAC 17 V_IPF1_05_M01255 TRANSFAC + 41364736 41364747 7.0E-06 AAAAATTAAATG 12 V_OSR2_04_M02889 TRANSFAC + 41363455 41363470 0.0E+00 GAATGCTACTTAAATA 16 V_DR1_Q3_M00762 TRANSFAC - 41365016 41365028 9.0E-06 AGACCAAAGTTCA 13 V_HNF4_Q6_01_M01031 TRANSFAC - 41365015 41365028 1.0E-06 AGACCAAAGTTCAG 14 V_NKX61_02_M01469 TRANSFAC - 41368808 41368823 9.0E-06 GGGTATTAATTGGGTC 16 V_NRF2_01_M00108 TRANSFAC - 41363909 41363918 6.0E-06 AACGGAAGAG 10 V_STAT1STAT1_Q3_M01212 TRANSFAC - 41363690 41363702 1.0E-06 ATTTCCAAGAACA 13 V_OCT1_06_M00162 TRANSFAC + 41364736 41364749 2.0E-06 AAAAATTAAATGCT 14 V_TBX5_Q5_M01044 TRANSFAC + 41364108 41364117 8.0E-06 GTCACACCTT 10 V_OSR1_04_M02888 TRANSFAC + 41363455 41363470 0.0E+00 GAATGCTACTTAAATA 16 V_IRX2_01_M01405 TRANSFAC + 41363649 41363665 7.0E-06 TATGTACTTGTACATAA 17 V_NFKAPPAB_01_M00054 TRANSFAC + 41363843 41363852 7.0E-06 GGGACTTCCC 10 V_STAT5A_01_M00457 TRANSFAC + 41363689 41363703 4.0E-06 ATGTTCTTGGAAATT 15 V_STAT5A_01_M00457 TRANSFAC - 41363689 41363703 9.0E-06 AATTTCCAAGAACAT 15 V_HNF1A_Q5_M02013 TRANSFAC - 41364736 41364746 8.0E-06 ATTTAATTTTT 11 V_HOMEZ_01_M01429 TRANSFAC - 41363510 41363526 4.0E-06 ATTAAAACGTTTTAAAT 17 V_PR_02_M00957 TRANSFAC + 41363675 41363701 2.0E-06 GAATGGTGAAATAAATGTTCTTGGAAA 27 V_PAX4_02_M00377 TRANSFAC + 41364735 41364745 3.0E-06 GAAAAATTAAA 11 V_GLI_Q2_M01037 TRANSFAC - 41364886 41364897 6.0E-06 ACTGGGTGGTCA 12 V_HNF4_01_M00134 TRANSFAC - 41365013 41365031 0.0E+00 AAAAGACCAAAGTTCAGTG 19 V_OG2_02_M01441 TRANSFAC - 41368806 41368822 7.0E-06 GGTATTAATTGGGTCCC 17 V_IRXB3_01_M01377 TRANSFAC + 41363649 41363665 5.0E-06 TATGTACTTGTACATAA 17 V_ATATA_B_M00311 TRANSFAC - 41363462 41363471 4.0E-06 TTATTTAAGT 10 V_ZIC2_01_M00449 TRANSFAC - 41364887 41364895 6.0E-06 TGGGTGGTC 9 V_STAT1_05_M01260 TRANSFAC - 41364686 41364707 7.0E-06 AGTTTAAGGGAAGGAAGTTGGA 22 V_SMAD1_01_M01590 TRANSFAC - 41365026 41365037 8.0E-06 AATGAGAAAAGA 12 V_AP2_Q3_M00800 TRANSFAC + 41364263 41364278 2.0E-06 GGCCCCAGGCGGTGCT 16 V_HSF1_Q6_01_M02017 TRANSFAC - 41364356 41364369 9.0E-06 GAGACTTCTGGAGT 14

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.