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CCDC104 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 112942 coiled-coil domain containing 104 chr2 + 55741739 - 55747239 55746739 Transcription Factor Binding Sites   Download all TFBS in the CCDC104 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints HOXD12_homeodomain_DBD_monomeric_9_1 SELEX - 55746114 55746122 9.0E-06 GTAATTAAA 9 GABPA_MA0062.2 JASPAR - 55746731 55746741 1.0E-06 CCGGAAGTGAA 11 POU2F1_POU_DBD_dimeric_14_1 SELEX + 55743978 55743991 4.0E-06 CATCCATATGCATT 14 ALX3_homeodomain_full_monomeric_10_1 SELEX + 55746114 55746123 4.0E-06 TTTAATTACA 10 ALX3_homeodomain_full_monomeric_10_1 SELEX - 55746114 55746123 8.0E-06 TGTAATTAAA 10 SPIC_ETS_full_monomeric_14_1 SELEX - 55746264 55746277 0.0E+00 AAAAACAGGAAGAA 14 POU3F3_POU_DBD_monomeric_12_1 SELEX + 55744043 55744054 4.0E-06 TTGAATACATTA 12 POU3F2_POU_DBD_monomeric_13_1 SELEX + 55744042 55744054 5.0E-06 ATTGAATACATTA 13 RFX4_RFX_DBD_dimeric_16_1 SELEX + 55746766 55746781 1.0E-06 TGTTGCCATAGCGACC 16 RFX4_RFX_DBD_dimeric_16_1 SELEX - 55746766 55746781 1.0E-06 GGTCGCTATGGCAACA 16 POU3F4_POU_DBD_monomeric_11_1 SELEX + 55744044 55744054 8.0E-06 TGAATACATTA 11 Alx1_homeodomain_DBD_monomeric_10_1 SELEX + 55746114 55746123 4.0E-06 TTTAATTACA 10 Alx1_homeodomain_DBD_monomeric_10_1 SELEX - 55746114 55746123 6.0E-06 TGTAATTAAA 10 PDX1_homeodomain_DBD_monomeric_8_1 SELEX - 55746115 55746122 5.0E-06 GTAATTAA 8 NFYA_MA0060.1 JASPAR + 55746660 55746675 0.0E+00 TTTAACCAATCAGAAA 16 SPIB_ETS_DBD_monomeric_14_1 SELEX - 55746264 55746277 3.0E-06 AAAAACAGGAAGAA 14 BARHL2_homeodomain_full_dimeric_16_1 SELEX + 55743913 55743928 5.0E-06 AAAACACTGCTAAATG 16 Barhl1_homeodomain_DBD_dimeric_16_1 SELEX + 55743913 55743928 5.0E-06 AAAACACTGCTAAATG 16 Dlx2_homeodomain_DBD_monomeric_8_1 SELEX - 55746115 55746122 5.0E-06 GTAATTAA 8 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX - 55746114 55746123 9.0E-06 TGTAATTAAA 10 Rfx3_RFX_DBD_dimeric_16_1 SELEX + 55746766 55746781 0.0E+00 TGTTGCCATAGCGACC 16 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 55746766 55746781 0.0E+00 GGTCGCTATGGCAACA 16 HOXC12_homeodomain_DBD_monomeric_9_1 SELEX - 55746114 55746122 7.0E-06 GTAATTAAA 9 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX - 55746652 55746665 8.0E-06 GTTAAAAAAGAACA 14 HOXB2_homeodomain_DBD_monomeric_10_1 SELEX - 55746114 55746123 2.0E-06 TGTAATTAAA 10 MEOX2_homeodomain_DBD_monomeric_10_1 SELEX - 55746114 55746123 2.0E-06 TGTAATTAAA 10 VAX1_homeodomain_DBD_monomeric_8_1 SELEX + 55746115 55746122 9.0E-06 TTAATTAC 8 MIXL1_homeodomain_full_monomeric_10_1 SELEX - 55746114 55746123 6.0E-06 TGTAATTAAA 10 Tcf7_HMG_DBD_monomeric_12_1 SELEX + 55746019 55746030 9.0E-06 AGAGATTAAAGA 12 GSX2_homeodomain_DBD_monomeric_10_1 SELEX - 55746114 55746123 4.0E-06 TGTAATTAAA 10 RFX2_RFX_DBD_dimeric_16_1 SELEX + 55746766 55746781 0.0E+00 TGTTGCCATAGCGACC 16 RFX2_RFX_DBD_dimeric_16_1 SELEX - 55746766 55746781 0.0E+00 GGTCGCTATGGCAACA 16 RFX5_RFX_DBD_dimeric_16_3 SELEX - 55746766 55746781 1.0E-06 GGTCGCTATGGCAACA 16 HOXB3_homeodomain_DBD_monomeric_10_1 SELEX - 55746114 55746123 6.0E-06 TGTAATTAAA 10 POU3F1_POU_DBD_monomeric_12_2 SELEX + 55744043 55744054 8.0E-06 TTGAATACATTA 12 POU5F1P1_POU_DBD_monomeric_12_1 SELEX + 55743979 55743990 8.0E-06 ATCCATATGCAT 12 POU5F1P1_POU_DBD_monomeric_12_1 SELEX - 55743979 55743990 8.0E-06 ATGCATATGGAT 12 VAX2_homeodomain_DBD_monomeric_8_1 SELEX + 55746115 55746122 5.0E-06 TTAATTAC 8 SOX18_HMG_full_dimeric_15_3 SELEX + 55746605 55746619 6.0E-06 ATGACTTCCAGCCAA 15 SPI1_ETS_full_monomeric_14_1 SELEX - 55746264 55746277 2.0E-06 AAAAACAGGAAGAA 14 RUNX1_MA0002.2 JASPAR - 55747121 55747131 9.0E-06 GCTTGTGGTTA 11 IRF3_IRF_full_trimeric_21_1 SELEX + 55747801 55747821 1.0E-06 CAGAAAAGGAACCAGAAACCA 21 ZNF524_C2H2_full_monomeric_14_1 SELEX - 55746332 55746345 6.0E-06 CTTGAACCCGGGAA 14 MNX1_homeodomain_DBD_monomeric_10_1 SELEX - 55746114 55746123 1.0E-06 TGTAATTAAA 10 Meox2_homeodomain_DBD_monomeric_8_1 SELEX + 55746115 55746122 9.0E-06 TTAATTAC 8 V_MEQ_01_M02049 TRANSFAC + 55743939 55743947 7.0E-06 AACACACAC 9 V_SPI1_01_M01203 TRANSFAC - 55746261 55746277 5.0E-06 AAAAACAGGAAGAAAGA 17 V_TEL1_02_M02070 TRANSFAC - 55746733 55746742 5.0E-06 CCCGGAAGTG 10 V_AML_Q6_M00769 TRANSFAC - 55747119 55747133 4.0E-06 TGGCTTGTGGTTACC 15 V_ZFP410_04_M02936 TRANSFAC - 55746925 55746941 7.0E-06 CCATCCCGCCCCAAAGG 17 V_YY1_02_M00069 TRANSFAC + 55746774 55746793 9.0E-06 TAGCGACCATTTTGCATTAA 20 V_DMRT3_01_M01148 TRANSFAC + 55744041 55744055 7.0E-06 TATTGAATACATTAT 15 V_NF1_Q6_01_M00806 TRANSFAC + 55746605 55746621 1.0E-06 ATGACTTCCAGCCAATA 17 V_NFY_Q6_M00185 TRANSFAC + 55746662 55746672 0.0E+00 TAACCAATCAG 11 V_DLX3_01_M01400 TRANSFAC + 55746110 55746126 3.0E-06 ACCCTTTAATTACAAAC 17 V_EVI1_04_M00081 TRANSFAC - 55746657 55746671 7.0E-06 TGATTGGTTAAAAAA 15 V_BCL6_01_M01183 TRANSFAC + 55746266 55746281 1.0E-06 CTTCCTGTTTTTCTTT 16 V_NERF_01_M01976 TRANSFAC - 55746733 55746742 9.0E-06 CCCGGAAGTG 10 V_IK_Q5_M01169 TRANSFAC - 55746496 55746505 3.0E-06 TTTGGGAGGC 10 V_AR_Q6_01_M01996 TRANSFAC + 55744003 55744017 1.0E-06 GTGCAAGCTGTTCTT 15 V_MEF2_02_M00231 TRANSFAC - 55744019 55744040 9.0E-06 CGCTTATCATAAAATAAACTCA 22 V_MEIS1AHOXA9_01_M00420 TRANSFAC + 55746017 55746030 1.0E-05 TAAGAGATTAAAGA 14 V_PITX2_Q6_M02114 TRANSFAC - 55746376 55746385 1.0E-06 TGTAATCCCA 10 V_PITX2_Q6_M02114 TRANSFAC - 55746510 55746519 9.0E-06 TGTAATTCCA 10 V_HTF_01_M00538 TRANSFAC + 55747811 55747834 3.0E-06 ACCAGAAACCACGTCATATAAATG 24 V_PU1_Q4_M01172 TRANSFAC + 55746258 55746276 0.0E+00 TTTTCTTTCTTCCTGTTTT 19 V_NFY_Q6_01_M00775 TRANSFAC + 55746659 55746671 0.0E+00 TTTTAACCAATCA 13 V_AR_03_M00956 TRANSFAC + 55743996 55744022 5.0E-06 TAACAGTGTGCAAGCTGTTCTTCTGAG 27 V_ELF2_02_M02054 TRANSFAC - 55746733 55746742 8.0E-06 CCCGGAAGTG 10 V_NFY_C_M00209 TRANSFAC - 55746660 55746673 0.0E+00 TCTGATTGGTTAAA 14 V_HMBOX1_01_M01456 TRANSFAC + 55745991 55746007 0.0E+00 TAATTCTAGTTATCTTT 17 V_CRX_Q4_M00623 TRANSFAC - 55746018 55746030 8.0E-06 TCTTTAATCTCTT 13 V_PR_Q2_M00960 TRANSFAC - 55746651 55746660 9.0E-06 AAAAGAACAG 10 V_LMX1_01_M01409 TRANSFAC + 55746111 55746127 2.0E-06 CCCTTTAATTACAAACG 17 V_PR_01_M00954 TRANSFAC + 55743996 55744022 7.0E-06 TAACAGTGTGCAAGCTGTTCTTCTGAG 27 V_CART1_01_M00416 TRANSFAC + 55745988 55746005 1.0E-06 TCCTAATTCTAGTTATCT 18 V_CART1_01_M00416 TRANSFAC - 55745988 55746005 5.0E-06 AGATAACTAGAATTAGGA 18 V_RUNX1_01_M02257 TRANSFAC - 55747121 55747131 9.0E-06 GCTTGTGGTTA 11 V_HOXD12_01_M01380 TRANSFAC + 55747341 55747357 4.0E-06 TTGAATCGTAAATTCGG 17 V_HOXD11_01_M01434 TRANSFAC + 55747341 55747357 9.0E-06 TTGAATCGTAAATTCGG 17 V_GADP_01_M01258 TRANSFAC + 55746733 55746744 3.0E-06 CACTTCCGGGCC 12 V_GR_01_M00955 TRANSFAC + 55743996 55744022 4.0E-06 TAACAGTGTGCAAGCTGTTCTTCTGAG 27 V_HOXC12_01_M01437 TRANSFAC + 55747341 55747357 2.0E-06 TTGAATCGTAAATTCGG 17 V_MEF2_04_M00233 TRANSFAC - 55746651 55746672 1.0E-05 CTGATTGGTTAAAAAAGAACAG 22 V_PEBP_Q6_M00984 TRANSFAC + 55747119 55747133 4.0E-06 GGTAACCACAAGCCA 15 V_SPIB_01_M01204 TRANSFAC - 55746261 55746277 0.0E+00 AAAAACAGGAAGAAAGA 17 V_TEL2_Q6_M00678 TRANSFAC + 55746732 55746741 9.0E-06 TCACTTCCGG 10 V_STAF_02_M00264 TRANSFAC + 55746291 55746311 8.0E-06 GTCTCCCAGGCTGCAGTGCAG 21 V_POU6F1_01_M00465 TRANSFAC + 55744045 55744055 7.0E-06 GAATACATTAT 11 V_TEL1_01_M01993 TRANSFAC - 55746733 55746742 5.0E-06 CCCGGAAGTG 10 V_ELF4_01_M01979 TRANSFAC - 55746733 55746742 4.0E-06 CCCGGAAGTG 10 V_ISGF4G_04_M02875 TRANSFAC - 55745997 55746010 7.0E-06 GATAAAGATAACTA 14 V_ISGF4G_04_M02875 TRANSFAC - 55746265 55746278 7.0E-06 GAAAAACAGGAAGA 14 V_HNF4A_02_M02868 TRANSFAC - 55747022 55747037 5.0E-06 CCACAAAGTCCAAGAT 16 V_LIM1_01_M01418 TRANSFAC + 55746111 55746127 9.0E-06 CCCTTTAATTACAAACG 17 V_ICSBP_Q6_M00699 TRANSFAC + 55747810 55747821 1.0E-05 AACCAGAAACCA 12 V_OTX2_Q3_M01719 TRANSFAC + 55746017 55746029 1.0E-06 TAAGAGATTAAAG 13 V_ELF1_Q6_M00746 TRANSFAC - 55746265 55746276 4.0E-06 AAAACAGGAAGA 12 V_DLX7_01_M01486 TRANSFAC + 55746110 55746126 1.0E-06 ACCCTTTAATTACAAAC 17 V_CAAT_01_M00254 TRANSFAC + 55746660 55746671 0.0E+00 TTTAACCAATCA 12 V_ZFP187_04_M02934 TRANSFAC + 55746638 55746653 4.0E-06 CAGCCCTCGTCCACTG 16 V_ALPHACP1_01_M00687 TRANSFAC + 55746662 55746672 5.0E-06 TAACCAATCAG 11 V_POU5F1_01_M01307 TRANSFAC - 55746782 55746791 1.0E-06 AATGCAAAAT 10 V_TAL1_01_M01591 TRANSFAC - 55747800 55747812 6.0E-06 GTTCCTTTTCTGC 13 V_HDX_01_M01333 TRANSFAC + 55747510 55747526 7.0E-06 AATGAGAAATGATTTCA 17 V_AIRE_01_M00999 TRANSFAC + 55747217 55747242 3.0E-06 TTTAGAGCTGGTTGTGTGGGAGGAAT 26 V_GATA6_01_M00462 TRANSFAC - 55745998 55746007 9.0E-06 AAAGATAACT 10 V_ZFP206_01_M01742 TRANSFAC + 55746707 55746717 5.0E-06 TGCGCAGGCTC 11 V_NFY_01_M00287 TRANSFAC + 55746660 55746675 0.0E+00 TTTAACCAATCAGAAA 16 V_LMX1B_01_M01363 TRANSFAC - 55746111 55746127 8.0E-06 CGTTTGTAATTAAAGGG 17 V_STAT1STAT1_Q3_M01212 TRANSFAC + 55746575 55746587 7.0E-06 ATTTATCAGAAGA 13 V_PITX2_Q2_M00482 TRANSFAC - 55746375 55746385 1.0E-06 TGTAATCCCAG 11 V_HOXD8_01_M01432 TRANSFAC - 55746109 55746125 7.0E-06 TTTGTAATTAAAGGGTT 17 V_SOX1_03_M02802 TRANSFAC - 55744038 55744053 7.0E-06 AATGTATTCAATACGC 16 V_HOXC10_01_M01361 TRANSFAC + 55747341 55747356 1.0E-05 TTGAATCGTAAATTCG 16 V_ELF_02_M02053 TRANSFAC - 55746733 55746742 1.0E-05 CCCGGAAGTG 10 V_GATA5_03_M02756 TRANSFAC + 55744027 55744043 7.0E-06 TTTTATGATAAGCGTAT 17 V_NFYA_Q5_M02106 TRANSFAC + 55746662 55746675 1.0E-06 TAACCAATCAGAAA 14 V_RFX1_02_M00281 TRANSFAC + 55746765 55746782 1.0E-05 GTGTTGCCATAGCGACCA 18 V_RFX1_02_M00281 TRANSFAC - 55746765 55746782 0.0E+00 TGGTCGCTATGGCAACAC 18 V_NF1_Q6_M00193 TRANSFAC - 55746604 55746621 0.0E+00 TATTGGCTGGAAGTCATA 18

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.