Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

WIF1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 11197 WNT inhibitory factor 1 chr12 - 65514846 - 65520346 65515346 Transcription Factor Binding Sites   Download all TFBS in the WIF1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR + 65515364 65515382 4.0E-06 CCGCCACTTGGGGGCGCTG 19 MSX2_homeodomain_DBD_dimeric_18_1 SELEX + 65517445 65517462 0.0E+00 CTAATCAAATACTAATTG 18 MSX2_homeodomain_DBD_dimeric_18_1 SELEX - 65517446 65517463 0.0E+00 TCAATTAGTATTTGATTA 18 SPIC_ETS_full_monomeric_14_1 SELEX + 65519200 65519213 1.0E-06 AAAAAAGGGAAGTC 14 BARX1_homeodomain_DBD_dimeric_17_1 SELEX - 65517446 65517462 2.0E-06 CAATTAGTATTTGATTA 17 SRY_HMG_DBD_dimeric_16_1 SELEX + 65517338 65517353 7.0E-06 CACAATAGGCATTTTC 16 HNF1B_MA0153.1 JASPAR - 65517448 65517459 7.0E-06 TTAGTATTTGAT 12 SPIB_ETS_DBD_monomeric_14_1 SELEX + 65517497 65517510 0.0E+00 AAAAAGAGGAACTA 14 SPIB_ETS_DBD_monomeric_14_1 SELEX + 65519200 65519213 2.0E-06 AAAAAAGGGAAGTC 14 Pou2f2_POU_DBD_dimeric_14_1 SELEX + 65517462 65517475 8.0E-06 GAGAAATATTCATA 14 SP1_MA0079.2 JASPAR - 65515140 65515149 9.0E-06 CCCCTCCTCC 10 SP1_MA0079.2 JASPAR - 65515167 65515176 9.0E-06 CCCCTCCTCC 10 CTCF_C2H2_full_monomeric_17_1 SELEX - 65515365 65515381 4.0E-06 AGCGCCCCCAAGTGGCG 17 Lhx3_MA0135.1 JASPAR + 65517476 65517488 2.0E-06 AAATTTATTTTTT 13 Msx3_homeodomain_DBD_dimeric_18_1 SELEX + 65517445 65517462 1.0E-06 CTAATCAAATACTAATTG 18 Msx3_homeodomain_DBD_dimeric_18_1 SELEX - 65517446 65517463 1.0E-06 TCAATTAGTATTTGATTA 18 POU1F1_POU_DBD_monomeric_17_1 SELEX - 65517461 65517477 4.0E-06 TTTATGAATATTTCTCA 17 HESX1_homeodomain_DBD_dimeric_15_1 SELEX + 65517456 65517470 7.0E-06 CTAATTGAGAAATAT 15 POU3F1_POU_DBD_monomeric_12_2 SELEX - 65517463 65517474 1.0E-05 ATGAATATTTCT 12 SPI1_ETS_full_monomeric_14_1 SELEX + 65517497 65517510 0.0E+00 AAAAAGAGGAACTA 14 SPI1_ETS_full_monomeric_14_1 SELEX + 65519200 65519213 2.0E-06 AAAAAAGGGAAGTC 14 MSX1_homeodomain_DBD_dimeric_18_1 SELEX + 65517445 65517462 0.0E+00 CTAATCAAATACTAATTG 18 MSX1_homeodomain_DBD_dimeric_18_1 SELEX - 65517446 65517463 1.0E-06 TCAATTAGTATTTGATTA 18 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX + 65517469 65517479 1.0E-05 ATTCATAAAAT 11 ONECUT3_CUT_DBD_monomeric_14_1 SELEX - 65517475 65517488 1.0E-05 AAAAAATAAATTTT 14 Zfx_MA0146.1 JASPAR - 65515351 65515364 5.0E-06 GCCGCCCAGGCCTC 14 V_HOXA9_01_M01351 TRANSFAC + 65517467 65517483 1.0E-06 ATATTCATAAAATTTAT 17 V_SPI1_01_M01203 TRANSFAC + 65517497 65517513 0.0E+00 AAAAAGAGGAACTAAAT 17 V_SPI1_01_M01203 TRANSFAC + 65519200 65519216 2.0E-06 AAAAAAGGGAAGTCTGA 17 V_DBX1_01_M01483 TRANSFAC + 65517446 65517462 1.0E-06 TAATCAAATACTAATTG 17 V_DBX1_01_M01483 TRANSFAC + 65519328 65519344 8.0E-06 AAGTCAACTACTAATAA 17 V_POU3F3_01_M03090 TRANSFAC - 65517463 65517479 4.0E-06 ATTTTATGAATATTTCT 17 V_POU3F3_01_M03090 TRANSFAC + 65517464 65517480 3.0E-06 GAAATATTCATAAAATT 17 V_ZFX_01_M01593 TRANSFAC - 65515346 65515361 1.0E-06 GCCCAGGCCTCGCGGG 16 V_NF1A_Q6_M02103 TRANSFAC + 65519937 65519952 8.0E-06 CAGGCAAGTTGCCAGA 16 V_HMGIY_Q3_M01010 TRANSFAC + 65517343 65517357 2.0E-06 TAGGCATTTTCTTTA 15 V_SPIB_02_M02041 TRANSFAC + 65517501 65517510 4.0E-06 AGAGGAACTA 10 V_SATB1_Q3_M01723 TRANSFAC + 65519235 65519250 6.0E-06 GAACCTAAAGACACAT 16 V_EGR_Q6_M00807 TRANSFAC + 65515224 65515234 3.0E-06 GTGGGGGCGGC 11 V_OCTAMER_01_M01324 TRANSFAC - 65517463 65517479 4.0E-06 ATTTTATGAATATTTCT 17 V_OCTAMER_01_M01324 TRANSFAC + 65517464 65517480 3.0E-06 GAAATATTCATAAAATT 17 V_POU1F1_Q6_M00744 TRANSFAC - 65517465 65517474 2.0E-06 ATGAATATTT 10 V_FOXO3A_Q1_M01137 TRANSFAC - 65517477 65517488 3.0E-06 AAAAAATAAATT 12 V_HNF3_Q6_01_M01012 TRANSFAC - 65517443 65517460 8.0E-06 ATTAGTATTTGATTAGGA 18 V_SP1_03_M02281 TRANSFAC - 65515140 65515149 9.0E-06 CCCCTCCTCC 10 V_SP1_03_M02281 TRANSFAC - 65515167 65515176 9.0E-06 CCCCTCCTCC 10 V_PU1_Q4_M01172 TRANSFAC - 65517498 65517516 0.0E+00 AGAATTTAGTTCCTCTTTT 19 V_PU1_Q4_M01172 TRANSFAC - 65519201 65519219 6.0E-06 TTCTCAGACTTCCCTTTTT 19 V_HOXD13_01_M01404 TRANSFAC + 65517467 65517482 1.0E-06 ATATTCATAAAATTTA 16 V_TCFAP2E_04_M02926 TRANSFAC - 65517380 65517393 0.0E+00 AACTAGAAAAAAAT 14 V_TCFAP2E_04_M02926 TRANSFAC - 65517481 65517494 6.0E-06 TGCACCAAAAAATA 14 V_TCFAP2E_04_M02926 TRANSFAC + 65519290 65519303 7.0E-06 GAATAGAAAAAAGA 14 V_PAX7_01_M01339 TRANSFAC + 65517452 65517468 4.0E-06 AATACTAATTGAGAAAT 17 V_CEBPB_01_M00109 TRANSFAC + 65517457 65517470 3.0E-06 TAATTGAGAAATAT 14 V_NKX62_Q2_M00489 TRANSFAC - 65517475 65517486 7.0E-06 AAAATAAATTTT 12 V_HNF1_C_M00206 TRANSFAC + 65519922 65519938 1.0E-05 AGCCATTCATTCACCCA 17 V_SPIC_01_M02042 TRANSFAC + 65517501 65517510 7.0E-06 AGAGGAACTA 10 V_ELF4_04_M02850 TRANSFAC + 65517469 65517485 6.0E-06 ATTCATAAAATTTATTT 17 V_ELF4_04_M02850 TRANSFAC - 65517476 65517492 1.0E-05 CACCAAAAAATAAATTT 17 V_ELF4_04_M02850 TRANSFAC - 65517477 65517493 3.0E-06 GCACCAAAAAATAAATT 17 V_HELIOSA_02_M01004 TRANSFAC - 65517439 65517449 2.0E-06 ATTAGGAAAAC 11 V_SPI1_03_M02078 TRANSFAC + 65517501 65517510 6.0E-06 AGAGGAACTA 10 V_OCT1_02_M00136 TRANSFAC + 65517463 65517477 1.0E-06 AGAAATATTCATAAA 15 V_ZFP105_03_M02827 TRANSFAC + 65519193 65519207 1.0E-06 ATCAAACAAAAAAGG 15 V_HOXB13_01_M01467 TRANSFAC + 65517467 65517482 9.0E-06 ATATTCATAAAATTTA 16 V_SOX8_04_M02912 TRANSFAC + 65517467 65517480 2.0E-06 ATATTCATAAAATT 14 V_POLY_C_M00212 TRANSFAC - 65517363 65517380 1.0E-05 TGTTAAAACCACTCGCTC 18 V_KROX_Q6_M00982 TRANSFAC - 65515221 65515234 2.0E-06 GCCGCCCCCACTCC 14 V_HOXB9_01_M01426 TRANSFAC + 65517467 65517482 3.0E-06 ATATTCATAAAATTTA 16 V_HNF1B_04_M02266 TRANSFAC - 65517448 65517459 7.0E-06 TTAGTATTTGAT 12 V_MAZ_Q6_01_M02023 TRANSFAC + 65515164 65515177 3.0E-06 GGAGGAGGAGGGGG 14 V_MAZ_Q6_01_M02023 TRANSFAC + 65515167 65515180 2.0E-06 GGAGGAGGGGGGGA 14 V_LHX2_01_M01325 TRANSFAC + 65517452 65517468 6.0E-06 AATACTAATTGAGAAAT 17 V_ISRE_01_M00258 TRANSFAC - 65517496 65517510 9.0E-06 TAGTTCCTCTTTTTC 15 V_HOX13_01_M00023 TRANSFAC - 65517444 65517473 0.0E+00 TGAATATTTCTCAATTAGTATTTGATTAGG 30 V_OCT1_04_M00138 TRANSFAC - 65517460 65517482 0.0E+00 TAAATTTTATGAATATTTCTCAA 23 V_OCT1_04_M00138 TRANSFAC + 65517461 65517483 5.0E-06 TGAGAAATATTCATAAAATTTAT 23 V_HBP1_03_M02762 TRANSFAC - 65519923 65519938 3.0E-06 TGGGTGAATGAATGGC 16 V_SP1SP3_Q4_M01219 TRANSFAC - 65515140 65515150 1.0E-05 CCCCCTCCTCC 11 V_SP1SP3_Q4_M01219 TRANSFAC - 65515167 65515177 1.0E-05 CCCCCTCCTCC 11 V_SPIB_01_M01204 TRANSFAC + 65517497 65517513 0.0E+00 AAAAAGAGGAACTAAAT 17 V_SPIB_01_M01204 TRANSFAC + 65519200 65519216 1.0E-06 AAAAAAGGGAAGTCTGA 17 V_NKX3A_01_M00451 TRANSFAC - 65517451 65517462 9.0E-06 CAATTAGTATTT 12 V_NCX_02_M01420 TRANSFAC + 65517446 65517462 9.0E-06 TAATCAAATACTAATTG 17 V_HB24_01_M01399 TRANSFAC + 65517443 65517457 6.0E-06 TCCTAATCAAATACT 15 V_TBP_06_M02814 TRANSFAC + 65517473 65517488 7.0E-06 ATAAAATTTATTTTTT 16 V_CTCF_02_M01259 TRANSFAC + 65515361 65515380 9.0E-06 CGGCCGCCACTTGGGGGCGC 20 V_STAT3_03_M01595 TRANSFAC + 65514990 65515005 9.0E-06 GCTGCCGGGAAAACTC 16 V_CTCF_01_M01200 TRANSFAC + 65515363 65515382 2.0E-06 GCCGCCACTTGGGGGCGCTG 20 V_LIM1_01_M01418 TRANSFAC + 65517452 65517468 4.0E-06 AATACTAATTGAGAAAT 17 V_SOX17_04_M02904 TRANSFAC + 65517463 65517479 2.0E-06 AGAAATATTCATAAAAT 17 V_GATA4_Q3_M00632 TRANSFAC + 65519294 65519305 3.0E-06 AGAAAAAAGACA 12 V_TFIII_Q6_M00706 TRANSFAC + 65519899 65519907 1.0E-05 AGAGGTAGG 9 V_S8_01_M00099 TRANSFAC - 65517453 65517468 2.0E-06 ATTTCTCAATTAGTAT 16 V_CIZ_01_M00734 TRANSFAC - 65517481 65517489 6.0E-06 CAAAAAATA 9 V_DMRT7_01_M01151 TRANSFAC + 65517373 65517386 3.0E-06 TTTTAACATTTTTT 14 V_MSX1_02_M01412 TRANSFAC + 65517451 65517466 7.0E-06 AAATACTAATTGAGAA 16 V_FPM315_01_M01587 TRANSFAC + 65515161 65515172 6.0E-06 GCGGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC + 65515164 65515175 4.0E-06 GGAGGAGGAGGG 12 V_SPIC_02_M02077 TRANSFAC + 65517501 65517510 7.0E-06 AGAGGAACTA 10 V_SRF_06_M02916 TRANSFAC - 65517376 65517392 5.0E-06 ACTAGAAAAAAATGTTA 17 V_ZIC3_04_M02837 TRANSFAC - 65515387 65515401 2.0E-06 CGCCCCCGGGGGGGC 15 V_ZIC3_04_M02837 TRANSFAC + 65515388 65515402 5.0E-06 CCCCCCCGGGGGCGG 15 V_ZIC1_04_M02835 TRANSFAC - 65515387 65515400 7.0E-06 GCCCCCGGGGGGGC 14 V_ZIC1_04_M02835 TRANSFAC + 65515388 65515401 6.0E-06 CCCCCCCGGGGGCG 14 V_ZIC1_04_M02835 TRANSFAC - 65515388 65515401 1.0E-06 CGCCCCCGGGGGGG 14 V_SOX15_04_M02903 TRANSFAC + 65519320 65519334 8.0E-06 GGAAATGTAAGTCAA 15 V_SRY_05_M02917 TRANSFAC + 65517332 65517348 1.0E-05 TCACAGCACAATAGGCA 17 V_CEBP_Q2_01_M00912 TRANSFAC - 65517457 65517468 5.0E-06 ATTTCTCAATTA 12 V_OG2_02_M01441 TRANSFAC + 65517452 65517468 9.0E-06 AATACTAATTGAGAAAT 17 V_HOXD10_01_M01375 TRANSFAC + 65517467 65517483 2.0E-06 ATATTCATAAAATTTAT 17 V_TCF3_05_M02920 TRANSFAC - 65517477 65517491 4.0E-06 ACCAAAAAATAAATT 15 V_ZIC2_04_M02836 TRANSFAC - 65515387 65515401 4.0E-06 CGCCCCCGGGGGGGC 15 V_ZIC2_04_M02836 TRANSFAC + 65515388 65515402 7.0E-06 CCCCCCCGGGGGCGG 15 V_GLIS2_04_M02863 TRANSFAC + 65517466 65517479 4.0E-06 AATATTCATAAAAT 14 V_PAX4_04_M00380 TRANSFAC - 65517366 65517395 9.0E-06 AGAACTAGAAAAAAATGTTAAAACCACTCG 30 V_PAX4_04_M00380 TRANSFAC - 65517459 65517488 8.0E-06 AAAAAATAAATTTTATGAATATTTCTCAAT 30 V_PAX4_04_M00380 TRANSFAC + 65519321 65519350 5.0E-06 GAAATGTAAGTCAACTACTAATAACACTGT 30 V_RORA2_01_M00157 TRANSFAC + 65519322 65519334 8.0E-06 AAATGTAAGTCAA 13 V_SPI1_02_M02043 TRANSFAC + 65517501 65517510 4.0E-06 AGAGGAACTA 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.