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HHLA2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 11148 HERV-H LTR-associating 2 chr3 + 108016331 - 108021831 108021331 Transcription Factor Binding Sites   Download all TFBS in the HHLA2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SOX4_HMG_DBD_dimeric_16_1 SELEX + 108016617 108016632 2.0E-06 AACCAATTCCTGTGTT 16 MEF2D_MADS_DBD_dimeric_12_1 SELEX + 108016649 108016660 5.0E-06 GCTTAAAATAGA 12 ESR2_MA0258.1 JASPAR + 108020596 108020613 8.0E-06 CAAGGTCATCTTGCCTCC 18 En1_MA0027.1 JASPAR + 108019257 108019267 8.0E-06 AAATAGTGCTC 11 IRX2_homeodomain_DBD_dimeric_12_1 SELEX - 108016778 108016789 8.0E-06 TGACATGACAAC 12 TEF_bZIP_DBD_dimeric_12_1 SELEX + 108016836 108016847 2.0E-06 AGTTACATAACC 12 TEF_bZIP_DBD_dimeric_12_1 SELEX - 108016836 108016847 9.0E-06 GGTTATGTAACT 12 ESRRG_nuclearreceptor_full_dimeric_17_1 SELEX + 108024575 108024591 3.0E-06 AGTGACAGTTAAGGTCA 17 SOX8_HMG_full_dimeric_15_1 SELEX + 108016618 108016632 2.0E-06 ACCAATTCCTGTGTT 15 HLF_bZIP_full_dimeric_12_1 SELEX + 108016836 108016847 2.0E-06 AGTTACATAACC 12 NFIL3_MA0025.1 JASPAR - 108016835 108016845 3.0E-06 TTATGTAACTC 11 Esrrb_MA0141.1 JASPAR + 108020592 108020603 2.0E-06 GCCTCAAGGTCA 12 SOX9_HMG_DBD_monomeric_9_1 SELEX - 108020682 108020690 4.0E-06 AAACAATAG 9 MEF2A_MADS_DBD_dimeric_12_1 SELEX + 108016649 108016660 4.0E-06 GCTTAAAATAGA 12 DBP_bZIP_full_dimeric_12_1 SELEX + 108016836 108016847 5.0E-06 AGTTACATAACC 12 DBP_bZIP_full_dimeric_12_1 SELEX - 108016836 108016847 6.0E-06 GGTTATGTAACT 12 RUNX3_RUNX_full_monomeric_10_1 SELEX - 108020763 108020772 1.0E-05 AAACCACAGA 10 MEF2B_MADS_full_dimeric_12_1 SELEX + 108016649 108016660 3.0E-06 GCTTAAAATAGA 12 Rfx3_RFX_DBD_dimeric_16_1 SELEX + 108016777 108016792 3.0E-06 GGTTGTCATGTCAACT 16 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 108016777 108016792 9.0E-06 AGTTGACATGACAACC 16 POU6F2_POU_DBD_dimeric_16_1 SELEX - 108016671 108016686 2.0E-06 TTAATGATCAAAATAT 16 MEF2A_MA0052.1 JASPAR - 108016650 108016659 7.0E-06 CTATTTTAAG 10 HNF1A_homeodomain_full_dimeric_15_1 SELEX + 108016674 108016688 8.0E-06 TTTTGATCATTAACC 15 HNF1A_homeodomain_full_dimeric_15_1 SELEX - 108016674 108016688 5.0E-06 GGTTAATGATCAAAA 15 ESR1_MA0112.2 JASPAR + 108019149 108019168 3.0E-06 ATTCAAGGACAACCTGCCAT 20 ESR1_MA0112.2 JASPAR + 108020593 108020612 8.0E-06 CCTCAAGGTCATCTTGCCTC 20 FOXO4_forkhead_DBD_putatively-multimeric_12_1 SELEX + 108019205 108019216 4.0E-06 TTTCACCACAAG 12 SOX18_HMG_full_dimeric_15_1 SELEX + 108016618 108016632 1.0E-05 ACCAATTCCTGTGTT 15 ESRRG_nuclearreceptor_full_monomeric_10_1 SELEX + 108020595 108020604 1.0E-06 TCAAGGTCAT 10 SOX7_HMG_full_dimeric_17_1 SELEX + 108016617 108016633 6.0E-06 AACCAATTCCTGTGTTG 17 NFIL3_bZIP_DBD_dimeric_12_1 SELEX + 108016836 108016847 2.0E-06 AGTTACATAACC 12 RFX2_RFX_DBD_dimeric_16_1 SELEX - 108016777 108016792 7.0E-06 AGTTGACATGACAACC 16 HNF1B_homeodomain_full_dimeric_13_1 SELEX + 108016675 108016687 1.0E-05 TTTGATCATTAAC 13 HNF1B_homeodomain_full_dimeric_13_1 SELEX - 108016675 108016687 4.0E-06 GTTAATGATCAAA 13 RFX5_RFX_DBD_dimeric_16_3 SELEX - 108016777 108016792 6.0E-06 AGTTGACATGACAACC 16 Esrra_nuclearreceptor_DBD_monomeric_11_1 SELEX + 108020594 108020604 1.0E-06 CTCAAGGTCAT 11 Hltf_MA0109.1 JASPAR - 108020791 108020800 1.0E-05 TACCTTTTAT 10 SPDEF_ETS_full_putative-multimer_16_1 SELEX - 108020649 108020664 0.0E+00 GCAGGAAGAAGTGAAA 16 ESRRB_nuclearreceptor_DBD_monomeric_11_1 SELEX + 108020595 108020605 1.0E-06 TCAAGGTCATC 11 Sox11_HMG_DBD_dimeric_15_1 SELEX + 108016618 108016632 2.0E-06 ACCAATTCCTGTGTT 15 SOX9_MA0077.1 JASPAR - 108020682 108020690 7.0E-06 AAACAATAG 9 RUNX1_MA0002.2 JASPAR + 108020762 108020772 1.0E-06 CTCTGTGGTTT 11 HNF1B_homeodomain_full_dimeric_15_1 SELEX + 108016674 108016688 7.0E-06 TTTTGATCATTAACC 15 HNF1B_homeodomain_full_dimeric_15_1 SELEX - 108016674 108016688 5.0E-06 GGTTAATGATCAAAA 15 HNF1A_MA0046.1 JASPAR - 108016675 108016688 0.0E+00 GGTTAATGATCAAA 14 SOX9_HMG_full_dimeric_17_1 SELEX + 108016617 108016633 4.0E-06 AACCAATTCCTGTGTTG 17 V_RUSH1A_02_M01107 TRANSFAC - 108020791 108020800 1.0E-05 TACCTTTTAT 10 V_FOXP1_01_M00987 TRANSFAC - 108020791 108020810 5.0E-06 TTATGTGGATTACCTTTTAT 20 V_STAT5A_Q6_M01890 TRANSFAC + 108020617 108020629 9.0E-06 TTTCTTCTTGGAA 13 V_LEF1_04_M02774 TRANSFAC + 108016669 108016685 1.0E-05 TAATATTTTGATCATTA 17 V_AML_Q6_M00769 TRANSFAC + 108020760 108020774 2.0E-06 AGCTCTGTGGTTTGT 15 V_ESR1_01_M02261 TRANSFAC + 108019149 108019168 3.0E-06 ATTCAAGGACAACCTGCCAT 20 V_ESR1_01_M02261 TRANSFAC + 108020593 108020612 8.0E-06 CCTCAAGGTCATCTTGCCTC 20 V_EVI1_04_M00081 TRANSFAC + 108019247 108019261 3.0E-06 TGATTTATTAAAATA 15 V_BCL6_01_M01183 TRANSFAC - 108016532 108016547 9.0E-06 ATTCATGGATTTATTT 16 V_ERR3_Q2_01_M02094 TRANSFAC + 108020593 108020605 3.0E-06 CCTCAAGGTCATC 13 V_LRH1_Q5_01_M02098 TRANSFAC + 108020593 108020603 9.0E-06 CCTCAAGGTCA 11 V_MMEF2_Q6_M00405 TRANSFAC + 108016647 108016662 2.0E-06 GTGCTTAAAATAGACC 16 V_STAT_Q6_M00777 TRANSFAC + 108020616 108020628 6.0E-06 CTTTCTTCTTGGA 13 V_MEF2_02_M00231 TRANSFAC + 108016643 108016664 0.0E+00 CCAGGTGCTTAAAATAGACCAT 22 V_IRF_Q6_01_M00972 TRANSFAC - 108020648 108020658 4.0E-06 AGAAGTGAAAA 11 V_SRY_02_M00160 TRANSFAC - 108020681 108020692 6.0E-06 AGAAACAATAGA 12 V_IRF2_Q6_M01882 TRANSFAC - 108020645 108020660 9.0E-06 GAAGAAGTGAAAAGTA 16 V_NFAT3_Q3_M01734 TRANSFAC + 108016762 108016771 6.0E-06 TGTTTTTCCT 10 V_POU1F1_Q6_M00744 TRANSFAC - 108016492 108016501 9.0E-06 ATGATTATAT 10 V_P53_DECAMER_Q2_M00761 TRANSFAC - 108016805 108016814 9.0E-06 AGGCAAGTCT 10 V_HFH4_01_M00742 TRANSFAC - 108016531 108016543 5.0E-06 ATGGATTTATTTA 13 V_AREB6_04_M00415 TRANSFAC - 108019132 108019140 8.0E-06 CTGTTTCTT 9 V_PU1_Q4_M01172 TRANSFAC + 108020646 108020664 7.0E-06 ACTTTTCACTTCTTCCTGC 19 V_SOX21_03_M02803 TRANSFAC + 108019249 108019264 4.0E-06 ATTTATTAAAATAGTG 16 V_SOX21_03_M02803 TRANSFAC - 108019249 108019264 4.0E-06 CACTATTTTAATAAAT 16 V_P53_02_M00272 TRANSFAC + 108016805 108016814 9.0E-06 AGACTTGCCT 10 V_MEF2A_Q6_M02024 TRANSFAC - 108016649 108016658 2.0E-06 TATTTTAAGC 10 V_MEF2A_Q6_M02024 TRANSFAC - 108019252 108019261 5.0E-06 TATTTTAATA 10 V_AR_03_M00956 TRANSFAC + 108016814 108016840 8.0E-06 TAGGAGTGGAGAGTTTGTTCTGAGTTA 27 V_STAT4_Q4_M01666 TRANSFAC - 108020616 108020629 1.0E-06 TTCCAAGAAGAAAG 14 V_AP1_Q6_M00174 TRANSFAC + 108024554 108024564 1.0E-05 AATGACTCAAC 11 V_HNF6_Q6_M00639 TRANSFAC + 108016534 108016545 8.0E-06 ATAAATCCATGA 12 V_TST1_01_M00133 TRANSFAC - 108016788 108016802 5.0E-06 GGGAATTTAGAGTTG 15 V_HMBOX1_01_M01456 TRANSFAC - 108016679 108016695 6.0E-06 AATCACTGGTTAATGAT 17 V_TCF3_04_M02816 TRANSFAC - 108016669 108016685 1.0E-06 TAATGATCAAAATATTA 17 V_POU3F2_01_M00463 TRANSFAC + 108016530 108016543 5.0E-06 TTAAATAAATCCAT 14 V_PR_Q2_M00960 TRANSFAC - 108016585 108016594 1.0E-06 GATAGAACAT 10 V_DBP_Q6_01_M01872 TRANSFAC - 108016838 108016845 5.0E-06 TTATGTAA 8 V_LMX1_01_M01409 TRANSFAC + 108019246 108019262 7.0E-06 GTGATTTATTAAAATAG 17 V_PR_01_M00954 TRANSFAC + 108016814 108016840 0.0E+00 TAGGAGTGGAGAGTTTGTTCTGAGTTA 27 V_OCT1_03_M00137 TRANSFAC + 108016491 108016503 8.0E-06 TATATAATCATAT 13 V_E4BP4_01_M00045 TRANSFAC - 108016836 108016847 3.0E-06 GGTTATGTAACT 12 V_RUNX1_01_M02257 TRANSFAC + 108020762 108020772 1.0E-06 CTCTGTGGTTT 11 V_ARID5A_03_M02736 TRANSFAC + 108016668 108016681 8.0E-06 TTAATATTTTGATC 14 V_HNF1_Q6_M00790 TRANSFAC - 108016672 108016689 0.0E+00 TGGTTAATGATCAAAATA 18 V_MRF2_01_M00454 TRANSFAC + 108020782 108020795 5.0E-06 CTGTACAATATAAA 14 V_MRF2_01_M00454 TRANSFAC - 108020829 108020842 1.0E-05 AATGAGAATATCAA 14 V_RSRFC4_Q2_M00407 TRANSFAC + 108016647 108016663 9.0E-06 GTGCTTAAAATAGACCA 17 V_AP1_Q6_01_M00925 TRANSFAC + 108024555 108024563 2.0E-06 ATGACTCAA 9 V_IRF_Q6_M00772 TRANSFAC + 108020644 108020658 5.0E-06 TTACTTTTCACTTCT 15 V_IRF_Q6_M00772 TRANSFAC + 108020683 108020697 5.0E-06 TATTGTTTCTCTTCT 15 V_HNF1_Q6_01_M01011 TRANSFAC - 108016663 108016683 6.0E-06 ATGATCAAAATATTAAGCTAT 21 V_HNF1_Q6_01_M01011 TRANSFAC + 108016671 108016691 2.0E-06 ATATTTTGATCATTAACCAGT 21 V_MEF2_03_M00232 TRANSFAC + 108016643 108016664 0.0E+00 CCAGGTGCTTAAAATAGACCAT 22 V_JUNDM2_04_M02876 TRANSFAC + 108019219 108019234 9.0E-06 GTTGATGAGTCAAAGA 16 V_GR_01_M00955 TRANSFAC + 108016814 108016840 0.0E+00 TAGGAGTGGAGAGTTTGTTCTGAGTTA 27 V_ERR1_Q3_M01841 TRANSFAC - 108020592 108020606 9.0E-06 AGATGACCTTGAGGC 15 V_SOX12_04_M02900 TRANSFAC + 108016472 108016487 4.0E-06 TAAAAGACAAATGATT 16 V_MEF2_04_M00233 TRANSFAC + 108016643 108016664 0.0E+00 CCAGGTGCTTAAAATAGACCAT 22 V_PEBP_Q6_M00984 TRANSFAC - 108020760 108020774 2.0E-06 ACAAACCACAGAGCT 15 V_DAX1_01_M01248 TRANSFAC + 108020590 108020609 6.0E-06 CAGCCTCAAGGTCATCTTGC 20 V_TCF7_03_M02817 TRANSFAC - 108016669 108016685 2.0E-06 TAATGATCAAAATATTA 17 V_PNR_01_M01650 TRANSFAC - 108016883 108016896 5.0E-06 GCAGTCAGAAGTCA 14 V_MEF2_Q6_01_M00941 TRANSFAC - 108016650 108016661 5.0E-06 GTCTATTTTAAG 12 V_ARID3A_04_M02735 TRANSFAC - 108019245 108019261 8.0E-06 TATTTTAATAAATCACT 17 V_ARID3A_04_M02735 TRANSFAC + 108019246 108019262 1.0E-06 GTGATTTATTAAAATAG 17 V_TBP_06_M02814 TRANSFAC - 108019248 108019263 4.0E-06 ACTATTTTAATAAATC 16 V_LMO2COM_01_M00277 TRANSFAC + 108016641 108016652 7.0E-06 CTCCAGGTGCTT 12 V_NKX23_01_M01457 TRANSFAC - 108016641 108016656 8.0E-06 TTTTAAGCACCTGGAG 16 V_SOX17_04_M02904 TRANSFAC - 108016537 108016553 7.0E-06 GCCTTCATTCATGGATT 17 V_MAF_Q6_01_M00983 TRANSFAC + 108019221 108019231 3.0E-06 TGATGAGTCAA 11 V_MAF_Q6_01_M00983 TRANSFAC - 108024555 108024565 1.0E-06 TGTTGAGTCAT 11 V_SF1_Q6_01_M01132 TRANSFAC - 108020595 108020603 3.0E-06 TGACCTTGA 9 V_GCNF_01_M00526 TRANSFAC + 108019144 108019161 1.0E-05 AGGGAATTCAAGGACAAC 18 V_AP1_Q4_01_M00926 TRANSFAC - 108024555 108024562 1.0E-05 TGAGTCAT 8 V_GFI1_Q6_M01067 TRANSFAC - 108019242 108019254 3.0E-06 ATAAATCACTTGC 13 V_AP3_Q6_M00690 TRANSFAC + 108016792 108016799 5.0E-06 TCTAAATT 8 V_AP3_Q6_M00690 TRANSFAC + 108020701 108020708 5.0E-06 TCTAAATT 8 V_TCFE2A_03_M02823 TRANSFAC + 108016639 108016655 8.0E-06 TCCTCCAGGTGCTTAAA 17 V_HNF1_01_M00132 TRANSFAC - 108016674 108016688 0.0E+00 GGTTAATGATCAAAA 15 V_ZSCAN4_04_M02942 TRANSFAC - 108020767 108020782 7.0E-06 GGCAGCACACAAACCA 16 V_ERR2_01_M01589 TRANSFAC + 108020595 108020606 2.0E-06 TCAAGGTCATCT 12 V_TCF7_04_M02921 TRANSFAC + 108019249 108019263 9.0E-06 ATTTATTAAAATAGT 15 V_LMX1B_01_M01363 TRANSFAC + 108019245 108019261 9.0E-06 AGTGATTTATTAAAATA 17 V_LMX1B_01_M01363 TRANSFAC - 108019246 108019262 6.0E-06 CTATTTTAATAAATCAC 17 V_MYB_Q5_01_M00913 TRANSFAC - 108024577 108024585 4.0E-06 TAACTGTCA 9 V_FRA1_Q5_M01267 TRANSFAC - 108024555 108024562 1.0E-05 TGAGTCAT 8 V_NRF2_Q4_M00821 TRANSFAC - 108024554 108024566 1.0E-06 CTGTTGAGTCATT 13 V_TBX15_02_M01264 TRANSFAC + 108019215 108019232 2.0E-06 AGGAGTTGATGAGTCAAA 18 V_TBX15_02_M01264 TRANSFAC - 108020664 108020681 9.0E-06 AGGAGTTAAGGTAGCAAG 18 V_MYB_Q3_M00773 TRANSFAC + 108024575 108024585 1.0E-06 AGTGACAGTTA 11 V_STAT6_02_M00500 TRANSFAC + 108016484 108016491 1.0E-05 GATTTCCT 8 V_RSRFC4_01_M00026 TRANSFAC - 108016647 108016662 8.0E-06 GGTCTATTTTAAGCAC 16 V_T3RBETA_Q6_01_M02119 TRANSFAC + 108019144 108019160 9.0E-06 AGGGAATTCAAGGACAA 17 V_T3RBETA_Q6_01_M02119 TRANSFAC + 108024576 108024592 7.0E-06 GTGACAGTTAAGGTCAG 17 V_ESRRA_03_M02748 TRANSFAC + 108020592 108020608 1.0E-06 GCCTCAAGGTCATCTTG 17 V_SMAD_Q6_01_M00974 TRANSFAC - 108016870 108016880 7.0E-06 TAGACAGACAT 11 V_IRF6_03_M02770 TRANSFAC + 108019268 108019284 5.0E-06 TTAGACGAAACCAGTTA 17 V_SOX21_04_M02907 TRANSFAC + 108020679 108020695 3.0E-06 CCTCTATTGTTTCTCTT 17 V_LXRA_RXRA_Q3_M00647 TRANSFAC + 108024582 108024596 7.0E-06 GTTAAGGTCAGTGAC 15 V_SREBP1_02_M00221 TRANSFAC - 108020824 108020834 7.0E-06 TATCAACCCAC 11 V_NFE2_Q6_M02104 TRANSFAC + 108024554 108024569 1.0E-06 AATGACTCAACAGAGC 16 V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC + 108020765 108020772 1.0E-05 TGTGGTTT 8 V_SMAD3_Q6_M00701 TRANSFAC + 108016871 108016879 3.0E-06 TGTCTGTCT 9 V_HLF_01_M00260 TRANSFAC + 108016837 108016846 7.0E-06 GTTACATAAC 10 V_PR_02_M00957 TRANSFAC + 108016814 108016840 2.0E-06 TAGGAGTGGAGAGTTTGTTCTGAGTTA 27 V_BARHL2_01_M01446 TRANSFAC - 108020700 108020715 7.0E-06 TGAAACCAATTTAGAA 16 V_PIT1_Q6_M00802 TRANSFAC + 108016485 108016502 5.0E-06 ATTTCCTATATAATCATA 18 V_SRY_05_M02917 TRANSFAC - 108020679 108020695 3.0E-06 AAGAGAAACAATAGAGG 17 V_EHF_07_M02849 TRANSFAC + 108016481 108016496 9.0E-06 AATGATTTCCTATATA 16 V_HOXD10_01_M01375 TRANSFAC + 108019248 108019264 6.0E-06 GATTTATTAAAATAGTG 17 V_TCF11MAFG_01_M00284 TRANSFAC - 108019215 108019236 5.0E-06 AATCTTTGACTCATCAACTCCT 22 V_HNF1A_01_M02162 TRANSFAC - 108016675 108016688 0.0E+00 GGTTAATGATCAAA 14 V_DTYPEPA_B_M00334 TRANSFAC + 108016748 108016757 5.0E-06 AGCATTAAAC 10 V_GLIS2_04_M02863 TRANSFAC - 108016491 108016504 5.0E-06 AATATGATTATATA 14 V_GLIS2_04_M02863 TRANSFAC - 108019248 108019261 3.0E-06 TATTTTAATAAATC 14 V_GLIS2_04_M02863 TRANSFAC + 108019250 108019263 4.0E-06 TTTATTAAAATAGT 14 V_ARID5A_04_M02840 TRANSFAC - 108016483 108016499 4.0E-06 GATTATATAGGAAATCA 17 V_SMAD1_01_M01590 TRANSFAC - 108020614 108020625 1.0E-06 AAGAAGAAAGGA 12 V_ESR2_01_M02377 TRANSFAC + 108020596 108020613 8.0E-06 CAAGGTCATCTTGCCTCC 18 V_PAX6_01_M00097 TRANSFAC + 108020639 108020659 9.0E-06 ATGCTTTACTTTTCACTTCTT 21 V_NANOG_02_M01247 TRANSFAC - 108020677 108020696 6.0E-06 GAAGAGAAACAATAGAGGAG 20 V_HOXC9_01_M01416 TRANSFAC + 108016675 108016690 9.0E-06 TTTGATCATTAACCAG 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.