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RER1


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
11079 RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae) chr1 +2318213 - 2323713 2323213

Transcription Factor Binding Sites

 
Download all TFBS in the RER1 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
GABPA_MA0062.2 JASPAR + 2323194 2323204 7.0E-06 CCGGAAGCGGA 11
SP3_C2H2_DBD_monomeric_11_1 SELEX - 2323036 2323046 7.0E-06 GCCACACCCCC 11
KLF16_C2H2_DBD_monomeric_11_1 SELEX - 2323036 2323046 4.0E-06 GCCACACCCCC 11
NHLH1_MA0048.1 JASPAR + 2323112 2323123 1.0E-06 ACGCAGCTGCGC 12
NHLH1_MA0048.1 JASPAR - 2323112 2323123 0.0E+00 GCGCAGCTGCGT 12
SCRT2_C2H2_DBD_monomeric_13_1 SELEX - 2325839 2325851 2.0E-06 AGGCAACAGGTGG 13
ETV2_ETS_DBD_monomeric_11_1 SELEX + 2323198 2323208 7.0E-06 AAGCGGAAATG 11
NR4A2_nuclearreceptor_full_dimeric_17_1 SELEX + 2322857 2322873 8.0E-06 AGGGCAGCCAGCGACCT 17
NR4A2_nuclearreceptor_full_dimeric_17_1 SELEX - 2322857 2322873 5.0E-06 AGGTCGCTGGCTGCCCT 17
Rfx3_RFX_DBD_dimeric_16_1 SELEX - 2322575 2322590 8.0E-06 GGTTGCCATGGGGATC 16
ZBTB49_C2H2_DBD_monomeric_17_1 SELEX - 2319773 2319789 0.0E+00 TTTCTCCTGCCAGGTCA 17
SP1_C2H2_DBD_monomeric_11_1 SELEX - 2323036 2323046 8.0E-06 GCCACACCCCC 11
SCRT1_C2H2_DBD_monomeric_15_1 SELEX - 2325837 2325851 1.0E-06 AGGCAACAGGTGGCC 15
Gata1_MA0035.2 JASPAR - 2323820 2323830 6.0E-06 ACAGATAAGCG 11
RFX2_RFX_DBD_dimeric_16_1 SELEX - 2322575 2322590 1.0E-05 GGTTGCCATGGGGATC 16
RFX5_RFX_DBD_dimeric_16_3 SELEX + 2322575 2322590 7.0E-06 GATCCCCATGGCAACC 16
Stat3_MA0144.1 JASPAR + 2323399 2323408 6.0E-06 TGCCAGGAAG 10
MLXIPL_bHLH_full_dimeric_10_1 SELEX + 2319792 2319801 9.0E-06 GTCACGTGAA 10
Myf_MA0055.1 JASPAR - 2325840 2325851 5.0E-06 AGGCAACAGGTG 12
ETV6_ETS_full_monomeric_10_1 SELEX + 2323275 2323284 1.0E-06 AGCGGAAGTG 10
ETV6_ETS_full_dimeric_15_1 SELEX + 2323194 2323208 0.0E+00 CCGGAAGCGGAAATG 15
MLX_bHLH_full_dimeric_10_1 SELEX - 2319792 2319801 9.0E-06 TTCACGTGAC 10
NHLH1_bHLH_full_dimeric_10_1 SELEX + 2323113 2323122 2.0E-06 CGCAGCTGCG 10
NHLH1_bHLH_full_dimeric_10_1 SELEX - 2323113 2323122 2.0E-06 CGCAGCTGCG 10
ARNTL_bHLH_DBD_dimeric_10_1 SELEX + 2319792 2319801 6.0E-06 GTCACGTGAA 10
ARNTL_bHLH_DBD_dimeric_10_1 SELEX - 2319792 2319801 8.0E-06 TTCACGTGAC 10
V_BCL6_Q3_01_M02085 TRANSFAC - 2319467 2319476 2.0E-06 TTTTCTAGAA 10
V_YY1_02_M00069 TRANSFAC + 2322963 2322982 2.0E-06 CCGCTGCCATCTTGCCGCCG 20
V_MYB_03_M02883 TRANSFAC + 2319739 2319754 9.0E-06 GTAATAACTGCCATCT 16
V_MMEF2_Q6_M00405 TRANSFAC + 2319751 2319766 3.0E-06 ATCTTTAAATAACAAC 16
V_GABP_B_M00341 TRANSFAC + 2323193 2323204 8.0E-06 GCCGGAAGCGGA 12
V_GABP_B_M00341 TRANSFAC + 2323275 2323286 8.0E-06 AGCGGAAGTGCT 12
V_MEF2_02_M00231 TRANSFAC + 2319746 2319767 2.0E-06 CTGCCATCTTTAAATAACAACT 22
V_YY1_Q6_M00793 TRANSFAC + 2319748 2319756 7.0E-06 GCCATCTTT 9
V_YY1_Q6_M00793 TRANSFAC + 2322968 2322976 7.0E-06 GCCATCTTG 9
V_YY1_Q6_M00793 TRANSFAC + 2323235 2323243 7.0E-06 GCCATCTTG 9
V_NERF_Q2_M00531 TRANSFAC + 2323399 2323416 4.0E-06 TGCCAGGAAGGGCTGCGT 18
V_E2A_Q2_M00804 TRANSFAC + 2325839 2325852 3.0E-06 CCACCTGTTGCCTT 14
V_HEN1_01_M00068 TRANSFAC + 2323107 2323128 1.0E-06 AGAGGACGCAGCTGCGCCTGTG 22
V_HEN1_01_M00068 TRANSFAC - 2323107 2323128 2.0E-06 CACAGGCGCAGCTGCGTCCTCT 22
V_MEF2A_Q6_M02024 TRANSFAC - 2319752 2319761 4.0E-06 TATTTAAAGA 10
V_SPIC_01_M02042 TRANSFAC + 2323275 2323284 9.0E-06 AGCGGAAGTG 10
V_ELF4_04_M02850 TRANSFAC + 2319753 2319769 7.0E-06 CTTTAAATAACAACTTC 17
V_MYF_01_M01302 TRANSFAC - 2325840 2325851 5.0E-06 AGGCAACAGGTG 12
V_ZFP105_03_M02827 TRANSFAC + 2319754 2319768 3.0E-06 TTTAAATAACAACTT 15
V_FOXK1_04_M02856 TRANSFAC + 2319756 2319770 9.0E-06 TAAATAACAACTTCC 15
V_MEF2_03_M00232 TRANSFAC + 2319746 2319767 5.0E-06 CTGCCATCTTTAAATAACAACT 22
V_CMYB_01_M00004 TRANSFAC - 2323170 2323187 5.0E-06 CGCGCAGGCCGTTGGCGG 18
V_GADP_01_M01258 TRANSFAC - 2323191 2323202 5.0E-06 CGCTTCCGGCGC 12
V_REX1_03_M01744 TRANSFAC - 2322964 2322975 9.0E-06 AAGATGGCAGCG 12
V_GATA1_09_M02254 TRANSFAC - 2323820 2323830 6.0E-06 ACAGATAAGCG 11
V_MEF2_Q6_01_M00941 TRANSFAC - 2319753 2319764 8.0E-06 TGTTATTTAAAG 12
V_GABPBETA_Q3_M01876 TRANSFAC + 2323275 2323285 2.0E-06 AGCGGAAGTGC 11
V_FOXL1_02_M02857 TRANSFAC + 2319751 2319766 5.0E-06 ATCTTTAAATAACAAC 16
V_HEN1_02_M00058 TRANSFAC + 2323107 2323128 0.0E+00 AGAGGACGCAGCTGCGCCTGTG 22
V_HEN1_02_M00058 TRANSFAC - 2323107 2323128 1.0E-06 CACAGGCGCAGCTGCGTCCTCT 22
V_DELTAEF1_01_M00073 TRANSFAC + 2325851 2325861 8.0E-06 TTCCACCTGAA 11
V_SRF_06_M02916 TRANSFAC + 2319753 2319769 9.0E-06 CTTTAAATAACAACTTC 17
V_MEF2A_05_M01301 TRANSFAC - 2319753 2319764 5.0E-06 TGTTATTTAAAG 12
V_SP1_Q4_01_M00932 TRANSFAC - 2323221 2323233 8.0E-06 CGAGGGCGGGGCC 13
V_RNF96_01_M01199 TRANSFAC - 2323467 2323476 7.0E-06 GCCCGCGGCC 10
V_MIF1_01_M00279 TRANSFAC - 2325842 2325859 5.0E-06 CAGGTGGAAGGCAACAGG 18
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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