Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

LILRA2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 11027 leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2 chr19 + 55080256 - 55085756 55085256 Transcription Factor Binding Sites   Download all TFBS in the LILRA2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints HOXD12_homeodomain_DBD_monomeric_9_1 SELEX - 55084435 55084443 5.0E-06 ATAATAAAA 9 Hoxc10_homeodomain_DBD_monomeric_10_2 SELEX - 55084434 55084443 6.0E-06 ATAATAAAAC 10 SPIC_ETS_full_monomeric_14_1 SELEX - 55083860 55083873 0.0E+00 AGAAAGAGGAAGAA 14 SPIC_ETS_full_monomeric_14_1 SELEX + 55084363 55084376 0.0E+00 GAAAAGGGGAAGTA 14 POU3F2_POU_DBD_monomeric_13_1 SELEX + 55083893 55083905 9.0E-06 TCTGCATATTTCA 13 POU3F4_POU_DBD_monomeric_11_1 SELEX + 55083895 55083905 8.0E-06 TGCATATTTCA 11 POU1F1_POU_DBD_monomeric_14_1 SELEX - 55083889 55083902 5.0E-06 AATATGCAGATCAT 14 SPIB_ETS_DBD_monomeric_14_1 SELEX - 55083860 55083873 2.0E-06 AGAAAGAGGAAGAA 14 SPIB_ETS_DBD_monomeric_14_1 SELEX + 55084363 55084376 0.0E+00 GAAAAGGGGAAGTA 14 SPIB_ETS_DBD_monomeric_14_1 SELEX - 55084456 55084469 8.0E-06 CAAAAGGGGAAATG 14 TCF7L1_HMG_full_monomeric_12_1 SELEX + 55084358 55084369 8.0E-06 AAAGAGAAAAGG 12 Egr1_C2H2_mouse-DBD_mutant_DBD_monomeric_16_1 SELEX - 55084295 55084310 6.0E-06 TCCCGCCCCCTCAGTG 16 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX - 55084435 55084444 3.0E-06 TATAATAAAA 10 POU3F3_POU_DBD_monomeric_13_1 SELEX - 55083890 55083902 9.0E-06 AATATGCAGATCA 13 HOXC12_homeodomain_DBD_monomeric_9_1 SELEX - 55084435 55084443 3.0E-06 ATAATAAAA 9 HOXA13_homeodomain_full_monomeric_10_1 SELEX - 55084434 55084443 8.0E-06 ATAATAAAAC 10 ZSCAN4_C2H2_full_monomeric_15_1 SELEX + 55084405 55084419 3.0E-06 AACACACACTCTCAA 15 Foxd3_MA0041.1 JASPAR + 55084430 55084441 5.0E-06 ATATGTTTTATT 12 ERF_ETS_DBD_monomeric_10_1 SELEX - 55085205 55085214 9.0E-06 ACAGGAAGTG 10 POU2F1_POU_DBD_monomeric_12_1 SELEX - 55083891 55083902 8.0E-06 AATATGCAGATC 12 SPI1_ETS_full_monomeric_14_1 SELEX - 55083860 55083873 2.0E-06 AGAAAGAGGAAGAA 14 SPI1_ETS_full_monomeric_14_1 SELEX + 55084363 55084376 0.0E+00 GAAAAGGGGAAGTA 14 CDX2_homeodomain_DBD_monomeric_9_1 SELEX - 55084435 55084443 3.0E-06 ATAATAAAA 9 CDX1_homeodomain_DBD_monomeric_9_1 SELEX - 55084435 55084443 3.0E-06 ATAATAAAA 9 RREB1_MA0073.1 JASPAR - 55084332 55084351 5.0E-06 ACATCACCCACCCCCACCCC 20 HOXA10_homeodomain_DBD_monomeric_11_1 SELEX - 55084434 55084444 7.0E-06 TATAATAAAAC 11 V_MINI20_B_M00324 TRANSFAC - 55083949 55083969 0.0E+00 TGACGCCCCCACTCAAGAGCC 21 V_MEQ_01_M02049 TRANSFAC + 55084405 55084413 7.0E-06 AACACACAC 9 V_SPI1_01_M01203 TRANSFAC - 55083857 55083873 4.0E-06 AGAAAGAGGAAGAACAG 17 V_SPI1_01_M01203 TRANSFAC + 55084363 55084379 0.0E+00 GAAAAGGGGAAGTACAG 17 V_POU3F3_01_M03090 TRANSFAC + 55083889 55083905 3.0E-06 ATGATCTGCATATTTCA 17 V_OBOX5_05_M03066 TRANSFAC - 55084441 55084457 0.0E+00 TGCAGGGATTAACTATA 17 V_SRY_07_M02813 TRANSFAC - 55084435 55084450 7.0E-06 ATTAACTATAATAAAA 16 V_OBOX1_01_M01450 TRANSFAC - 55084442 55084458 0.0E+00 ATGCAGGGATTAACTAT 17 V_EVI1_04_M00081 TRANSFAC + 55084428 55084442 6.0E-06 AAATATGTTTTATTA 15 V_FOXD3_01_M00130 TRANSFAC + 55084430 55084441 6.0E-06 ATATGTTTTATT 12 V_SPIB_02_M02041 TRANSFAC + 55084367 55084376 2.0E-06 AGGGGAAGTA 10 V_GABP_B_M00341 TRANSFAC - 55085203 55085214 1.0E-06 ACAGGAAGTGCA 12 V_OCTAMER_01_M01324 TRANSFAC + 55083889 55083905 3.0E-06 ATGATCTGCATATTTCA 17 V_MAF_Q6_M00648 TRANSFAC + 55083715 55083730 6.0E-06 TGGGAGGACGTGGGGT 16 V_PU1_Q4_M01172 TRANSFAC + 55083854 55083872 1.0E-06 GAACTGTTCTTCCTCTTTC 19 V_PU1_Q4_M01172 TRANSFAC - 55084364 55084382 0.0E+00 CTCCTGTACTTCCCCTTTT 19 V_PU1_Q4_M01172 TRANSFAC + 55084450 55084468 0.0E+00 TCCCTGCATTTCCCCTTTT 19 V_GM497_04_M02864 TRANSFAC + 55084402 55084417 7.0E-06 GGAAACACACACTCTC 16 V_SOX21_03_M02803 TRANSFAC + 55084435 55084450 1.0E-06 TTTTATTATAGTTAAT 16 V_SOX21_03_M02803 TRANSFAC - 55084435 55084450 2.0E-06 ATTAACTATAATAAAA 16 V_LDSPOLYA_B_M00317 TRANSFAC - 55084399 55084414 0.0E+00 AGTGTGTGTTTCCTTC 16 V_ETS_Q4_M00771 TRANSFAC + 55085202 55085213 7.0E-06 TTGCACTTCCTG 12 V_SPIC_01_M02042 TRANSFAC + 55084367 55084376 5.0E-06 AGGGGAAGTA 10 V_ELF4_04_M02850 TRANSFAC - 55084430 55084446 5.0E-06 ACTATAATAAAACATAT 17 V_ZNF219_01_M01122 TRANSFAC - 55084332 55084343 8.0E-06 CACCCCCACCCC 12 V_SOX7_03_M02807 TRANSFAC + 55084418 55084439 3.0E-06 AAGACAGAACAAATATGTTTTA 22 V_OBOX5_02_M01480 TRANSFAC - 55084441 55084457 0.0E+00 TGCAGGGATTAACTATA 17 V_SPI1_03_M02078 TRANSFAC + 55084367 55084376 6.0E-06 AGGGGAAGTA 10 V_SP4_03_M02810 TRANSFAC - 55084296 55084312 1.0E-06 GGTCCCGCCCCCTCAGT 17 V_KROX_Q6_M00982 TRANSFAC - 55084332 55084345 3.0E-06 CCCACCCCCACCCC 14 V_SP1_Q6_M00196 TRANSFAC + 55084300 55084312 3.0E-06 AGGGGGCGGGACC 13 V_CDX2_01_M01449 TRANSFAC - 55084432 55084447 5.0E-06 AACTATAATAAAACAT 16 V_HNF3ALPHA_Q6_M00724 TRANSFAC - 55084422 55084432 4.0E-06 TATTTGTTCTG 11 V_TTF1_Q6_M00794 TRANSFAC - 55083949 55083960 2.0E-06 CACTCAAGAGCC 12 V_OBOX2_01_M01364 TRANSFAC - 55084442 55084458 0.0E+00 ATGCAGGGATTAACTAT 17 V_OCT1_04_M00138 TRANSFAC - 55083885 55083907 5.0E-06 TCTGAAATATGCAGATCATCACA 23 V_MUSCLE_INI_B_M00321 TRANSFAC - 55083949 55083969 0.0E+00 TGACGCCCCCACTCAAGAGCC 21 V_SPIB_01_M01204 TRANSFAC - 55083857 55083873 7.0E-06 AGAAAGAGGAAGAACAG 17 V_SPIB_01_M01204 TRANSFAC + 55084363 55084379 6.0E-06 GAAAAGGGGAAGTACAG 17 V_RREB1_01_M00257 TRANSFAC - 55084333 55084346 7.0E-06 ACCCACCCCCACCC 14 V_CETS1P54_01_M00032 TRANSFAC - 55085205 55085214 9.0E-06 ACAGGAAGTG 10 V_IRX5_01_M01472 TRANSFAC + 55084425 55084441 8.0E-06 AACAAATATGTTTTATT 17 V_ELK1_01_M00007 TRANSFAC - 55085202 55085217 0.0E+00 CACACAGGAAGTGCAA 16 V_GR_Q6_02_M01836 TRANSFAC - 55084421 55084433 7.0E-06 ATATTTGTTCTGT 13 V_ELF1_Q6_M00746 TRANSFAC - 55083861 55083872 2.0E-06 GAAAGAGGAAGA 12 V_ELF1_Q6_M00746 TRANSFAC + 55084364 55084375 7.0E-06 AAAAGGGGAAGT 12 V_ELF1_Q6_M00746 TRANSFAC - 55084457 55084468 5.0E-06 AAAAGGGGAAAT 12 V_MINI19_B_M00323 TRANSFAC - 55083949 55083969 0.0E+00 TGACGCCCCCACTCAAGAGCC 21 V_TTF1_Q5_M02034 TRANSFAC + 55083948 55083961 9.0E-06 GGGCTCTTGAGTGG 14 V_GABPBETA_Q3_M01876 TRANSFAC - 55085204 55085214 1.0E-06 ACAGGAAGTGC 11 V_OBOX2_02_M03064 TRANSFAC - 55084442 55084458 0.0E+00 ATGCAGGGATTAACTAT 17 V_FOXL1_02_M02857 TRANSFAC - 55084428 55084443 4.0E-06 ATAATAAAACATATTT 16 V_FOXL1_02_M02857 TRANSFAC - 55084433 55084448 1.0E-06 TAACTATAATAAAACA 16 V_FOXL1_02_M02857 TRANSFAC + 55085220 55085235 8.0E-06 TGCACATAACAAAACC 16 V_OCT1_Q6_M00195 TRANSFAC - 55083889 55083903 4.0E-06 AAATATGCAGATCAT 15 V_FOXJ3_06_M02855 TRANSFAC - 55084428 55084444 5.0E-06 TATAATAAAACATATTT 17 V_PITX1_01_M01484 TRANSFAC - 55084442 55084458 0.0E+00 ATGCAGGGATTAACTAT 17 V_DOBOX5_01_M01463 TRANSFAC - 55084441 55084457 0.0E+00 TGCAGGGATTAACTATA 17 V_FPM315_01_M01587 TRANSFAC - 55083762 55083773 6.0E-06 TAGGGAGGAGGA 12 V_OTX2_01_M01387 TRANSFAC - 55084441 55084457 0.0E+00 TGCAGGGATTAACTATA 17 V_SPIC_02_M02077 TRANSFAC + 55084367 55084376 9.0E-06 AGGGGAAGTA 10 V_EGR1_06_M02744 TRANSFAC - 55084296 55084309 2.0E-06 CCCGCCCCCTCAGT 14 V_ZFP281_04_M02831 TRANSFAC - 55084334 55084348 1.0E-06 TCACCCACCCCCACC 15 V_EKLF_Q5_M01874 TRANSFAC + 55085267 55085276 2.0E-06 CCACACCCTG 10 V_GSC_01_M01428 TRANSFAC + 55084441 55084457 0.0E+00 TATAGTTAATCCCTGCA 17 V_PITX2_01_M01447 TRANSFAC - 55084441 55084457 1.0E-06 TGCAGGGATTAACTATA 17 V_HOXA10_01_M01464 TRANSFAC - 55084431 55084446 2.0E-06 ACTATAATAAAACATA 16 V_SP1_Q4_01_M00932 TRANSFAC + 55084300 55084312 5.0E-06 AGGGGGCGGGACC 13 V_HOXD10_01_M01375 TRANSFAC - 55084430 55084446 0.0E+00 ACTATAATAAAACATAT 17 V_OBOX5_01_M01381 TRANSFAC - 55084441 55084457 0.0E+00 TGCAGGGATTAACTATA 17 V_OBOX3_02_M03065 TRANSFAC - 55084442 55084458 0.0E+00 ATGCAGGGATTAACTAT 17 V_OTX1_01_M01366 TRANSFAC - 55084441 55084457 2.0E-06 TGCAGGGATTAACTATA 17 V_OBOX6_06_M03067 TRANSFAC + 55084441 55084457 0.0E+00 TATAGTTAATCCCTGCA 17 V_OBOX3_01_M01466 TRANSFAC - 55084442 55084458 0.0E+00 ATGCAGGGATTAACTAT 17 V_SPI1_02_M02043 TRANSFAC + 55084367 55084376 3.0E-06 AGGGGAAGTA 10 V_SOX14_03_M02798 TRANSFAC + 55084435 55084450 6.0E-06 TTTTATTATAGTTAAT 16 V_SOX14_03_M02798 TRANSFAC - 55084435 55084450 3.0E-06 ATTAACTATAATAAAA 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.