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VAX1


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSSMotifs
11023 ventral anterior homeobox 1 chr10 -118897312 - 118902812 118897812 VAX1_homeodomain_DBD_monomeric_8_1
V_VAX1_01_M01397

Transcription Factor Binding Sites

 
Download all TFBS in the VAX1 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
HOXD12_homeodomain_DBD_monomeric_9_1 SELEX + 118894357 118894365 1.0E-06 GTAATAAAA 9
Hoxc10_homeodomain_DBD_monomeric_10_2 SELEX + 118894357 118894366 1.0E-06 GTAATAAAAT 10
Hoxd9_homeodomain_DBD_monomeric_10_1 SELEX + 118894357 118894366 2.0E-06 GTAATAAAAT 10
STAT1_MA0137.2 JASPAR - 118898920 118898934 4.0E-06 CATTTCCCATAAAGG 15
Tcfcp2l1_MA0145.1 JASPAR + 118897803 118897816 1.0E-05 CCAGTCTGGTCCAG 14
HOXD11_homeodomain_DBD_monomeric_10_2 SELEX + 118894356 118894365 0.0E+00 AGTAATAAAA 10
HOXC12_homeodomain_DBD_monomeric_9_1 SELEX + 118894357 118894365 1.0E-06 GTAATAAAA 9
HOXD13_homeodomain_DBD_monomeric_10_1 SELEX + 118894357 118894366 4.0E-06 GTAATAAAAT 10
HOXC11_homeodomain_full_monomeric_11_2 SELEX + 118894356 118894366 1.0E-06 AGTAATAAAAT 11
Ascl2_bHLH_DBD_dimeric_10_1 SELEX - 118896897 118896906 5.0E-06 AACAGCTGCC 10
SRY_MA0084.1 JASPAR - 118893640 118893648 7.0E-06 GTTAACAAT 9
NFATC1_NFAT_full_dimeric_15_1 SELEX + 118898917 118898931 6.0E-06 ATTCCTTTATGGGAA 15
NFATC1_NFAT_full_dimeric_15_1 SELEX - 118898917 118898931 3.0E-06 TTCCCATAAAGGAAT 15
SOX14_HMG_DBD_dimeric_12_1 SELEX + 118898757 118898768 7.0E-06 ACAATATCTTTG 12
FEV_MA0156.1 JASPAR - 118894667 118894674 1.0E-05 CAGGAAAT 8
HOXC13_homeodomain_DBD_monomeric_10_1 SELEX + 118894357 118894366 6.0E-06 GTAATAAAAT 10
SRY_HMG_DBD_dimeric_13_1 SELEX + 118898757 118898769 9.0E-06 ACAATATCTTTGA 13
Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX + 118894356 118894366 0.0E+00 AGTAATAAAAT 11
CDX2_homeodomain_DBD_monomeric_9_1 SELEX + 118894357 118894365 1.0E-06 GTAATAAAA 9
CDX1_homeodomain_DBD_monomeric_9_1 SELEX + 118894357 118894365 1.0E-06 GTAATAAAA 9
HOXA10_homeodomain_DBD_monomeric_11_1 SELEX + 118894356 118894366 0.0E+00 AGTAATAAAAT 11
V_E2A_Q6_01_M02088 TRANSFAC - 118896895 118896907 4.0E-06 GAACAGCTGCCGA 13
V_GAF_Q6_M01209 TRANSFAC + 118893615 118893625 9.0E-06 CAAATTCCCAG 11
V_DMRT3_01_M01148 TRANSFAC - 118894352 118894366 4.0E-06 ATTTTATTACTTTGT 15
V_DMRT3_01_M01148 TRANSFAC + 118897380 118897394 2.0E-06 CTTTTGTTACAATCC 15
V_STAT3STAT3_Q3_M01220 TRANSFAC + 118898922 118898935 0.0E+00 TTTATGGGAAATGC 14
V_MMEF2_Q6_M00405 TRANSFAC + 118898471 118898486 4.0E-06 CACTCTAAAAAAGCCA 16
V_ZFP740_03_M02834 TRANSFAC + 118896578 118896593 1.0E-05 TCCCCACCCCCACCCT 16
V_HOXD13_01_M01404 TRANSFAC + 118894354 118894369 7.0E-06 AAAGTAATAAAATGCC 16
V_AP4_Q6_01_M00927 TRANSFAC - 118896898 118896906 1.0E-05 AACAGCTGC 9
V_POU3F2_01_M00463 TRANSFAC + 118898572 118898585 4.0E-06 TTGGATTTTTTCAT 14
V_POU3F2_01_M00463 TRANSFAC - 118898816 118898829 5.0E-06 TTGAATTGAATCAT 14
V_HOXB13_01_M01467 TRANSFAC + 118894354 118894369 2.0E-06 AAAGTAATAAAATGCC 16
V_HOXB9_01_M01426 TRANSFAC + 118894354 118894369 1.0E-06 AAAGTAATAAAATGCC 16
V_CDX2_01_M01449 TRANSFAC + 118894353 118894368 0.0E+00 CAAAGTAATAAAATGC 16
V_CDX1_01_M01373 TRANSFAC + 118894353 118894368 1.0E-06 CAAAGTAATAAAATGC 16
V_REX1_03_M01744 TRANSFAC - 118898530 118898541 2.0E-06 AAGATGGCTGTC 12
V_RREB1_01_M00257 TRANSFAC + 118896579 118896592 5.0E-06 CCCCACCCCCACCC 14
V_STAT4_Q5_M02117 TRANSFAC + 118898923 118898932 4.0E-06 TTATGGGAAA 10
V_BLIMP1_Q6_M01066 TRANSFAC + 118894701 118894716 1.0E-06 CAAGCAGGGAAAGTGG 16
V_NEUROD_02_M01288 TRANSFAC + 118896668 118896679 6.0E-06 CTGCTGCTGGCT 12
V_CIZ_01_M00734 TRANSFAC - 118898575 118898583 2.0E-06 GAAAAAATC 9
V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC - 118896586 118896594 8.0E-06 GAGGGTGGG 9
V_NANOG_01_M01123 TRANSFAC + 118894661 118894672 0.0E+00 AGGACCATTTCC 12
V_AIRE_01_M00999 TRANSFAC + 118894840 118894865 9.0E-06 CATGAACTTGGAATCATGGGAGAAAG 26
V_DMRT7_01_M01151 TRANSFAC - 118898811 118898824 7.0E-06 TTGAATCATTGTAG 14
V_FPM315_01_M01587 TRANSFAC + 118896626 118896637 4.0E-06 GAAGGAGGAGGG 12
V_STAT1STAT1_Q3_M01212 TRANSFAC - 118898921 118898933 4.0E-06 ATTTCCCATAAAG 13
V_P53_04_M01652 TRANSFAC - 118894320 118894339 8.0E-06 GCGCCTGCCTGGGCCTGCTT 20
V_ZFP281_01_M01597 TRANSFAC - 118896579 118896589 1.0E-06 TGGGGGTGGGG 11
V_OSR1_04_M02888 TRANSFAC - 118897893 118897908 6.0E-06 GTTCGCTACCTGATCG 16
V_DMRT2_01_M01147 TRANSFAC - 118894352 118894367 1.0E-06 CATTTTATTACTTTGT 16
V_DMRT2_01_M01147 TRANSFAC + 118898804 118898819 2.0E-06 GATTAGGCTACAATGA 16
V_IRF1_01_M00062 TRANSFAC + 118898770 118898782 4.0E-06 GAAAAGCAACAGC 13
V_UF1H3BETA_Q6_M01068 TRANSFAC - 118896578 118896591 0.0E+00 GGTGGGGGTGGGGA 14
V_HOXA10_01_M01464 TRANSFAC + 118894354 118894369 1.0E-06 AAAGTAATAAAATGCC 16
V_SOX5_04_M02910 TRANSFAC + 118898553 118898567 8.0E-06 TCTCTTCATTTAGTT 15
V_FEV_01_M02269 TRANSFAC - 118894667 118894674 1.0E-05 CAGGAAAT 8
V_STAT1_Q6_M01823 TRANSFAC + 118898923 118898932 4.0E-06 TTATGGGAAA 10
V_DMRT1_01_M01146 TRANSFAC - 118898810 118898824 7.0E-06 TTGAATCATTGTAGC 15
V_STAT1_05_M01260 TRANSFAC + 118898920 118898941 3.0E-06 CCTTTATGGGAAATGCGGAGCA 22
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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