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IFT27 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 11020 intraflagellar transport 27 homolog (Chlamydomonas) chr22 - 37171677 - 37177177 37172177 Transcription Factor Binding Sites   Download all TFBS in the IFT27 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints HOXD12_homeodomain_DBD_monomeric_9_1 SELEX - 37172779 37172787 9.0E-06 TTAATAAAA 9 Pax5_MA0014.1 JASPAR - 37170159 37170178 7.0E-06 GAGGCAGTGTTGTGTAACAA 20 EMX2_homeodomain_DBD_dimeric_14_1 SELEX - 37170215 37170228 5.0E-06 AAATAAATTAATGG 14 Arx_homeodomain_DBD_dimeric_13_1 SELEX - 37170218 37170230 4.0E-06 CAAAATAAATTAA 13 Mafb_bZIP_DBD_monomeric_12_1 SELEX - 37174363 37174374 0.0E+00 ATAATGCTGACT 12 HLF_bZIP_full_dimeric_12_1 SELEX + 37170160 37170171 7.0E-06 TGTTACACAACA 12 Alx1_homeodomain_DBD_dimeric_13_1 SELEX - 37170218 37170230 9.0E-06 CAAAATAAATTAA 13 NFYA_MA0060.1 JASPAR - 37172439 37172454 1.0E-06 TCTGACCAATCAGAAA 16 E2F7_E2F_DBD_dimeric_14_1 SELEX + 37172198 37172211 2.0E-06 GGTTGCCGCCAAAA 14 TCF7L1_HMG_full_monomeric_12_1 SELEX + 37172733 37172744 1.0E-06 AAAGCTCAAAGA 12 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 37171743 37171758 1.0E-05 GGTTACCATGGTGAAG 16 FOXB1_forkhead_DBD_putative-multimer_14_1 SELEX + 37170120 37170133 5.0E-06 AGATGACACAGCCA 14 Alx4_homeodomain_DBD_dimeric_13_1 SELEX - 37170218 37170230 5.0E-06 CAAAATAAATTAA 13 NRL_bZIP_DBD_monomeric_11_1 SELEX - 37174364 37174374 2.0E-06 ATAATGCTGAC 11 RFX5_RFX_DBD_dimeric_16_3 SELEX + 37171743 37171758 5.0E-06 CTTCACCATGGTAACC 16 RFX5_RFX_DBD_dimeric_16_3 SELEX - 37171743 37171758 9.0E-06 GGTTACCATGGTGAAG 16 HLF_MA0043.1 JASPAR + 37170160 37170171 9.0E-06 TGTTACACAACA 12 VDR_nuclearreceptor_full_dimeric_16_1 SELEX + 37172300 37172315 2.0E-06 CAGTTCTTCAAGTTCA 16 MAFK_bZIP_full_monomeric_12_1 SELEX - 37174364 37174375 3.0E-06 GATAATGCTGAC 12 EMX1_homeodomain_DBD_dimeric_14_1 SELEX - 37170215 37170228 5.0E-06 AAATAAATTAATGG 14 ELF5_MA0136.1 JASPAR - 37170087 37170095 5.0E-06 AATTTCCTT 9 RUNX3_RUNX_DBD_dimeric_18_1 SELEX - 37172624 37172641 6.0E-06 AAGCCGCGAGAACCGCGC 18 V_HOXA9_01_M01351 TRANSFAC + 37170211 37170227 2.0E-06 AGAACCATTAATTTATT 17 V_TAXCREB_01_M00114 TRANSFAC - 37172339 37172353 7.0E-06 GCTGGTTGACGTCAA 15 V_AP2ALPHA_Q6_M01857 TRANSFAC - 37171926 37171936 6.0E-06 CGCCCCCGGCC 11 V_TST1_02_M01316 TRANSFAC + 37170212 37170228 5.0E-06 GAACCATTAATTTATTT 17 V_TST1_02_M01316 TRANSFAC - 37170215 37170231 9.0E-06 GCAAAATAAATTAATGG 17 V_DBX1_01_M01483 TRANSFAC - 37170212 37170228 1.0E-06 AAATAAATTAATGGTTC 17 V_ZFP410_04_M02936 TRANSFAC - 37171849 37171865 7.0E-06 CCTCCCCTCCCCACCTT 17 V_MAFK_03_M02776 TRANSFAC - 37174362 37174376 0.0E+00 TGATAATGCTGACTA 15 V_NFY_Q6_M00185 TRANSFAC - 37172442 37172452 2.0E-06 TGACCAATCAG 11 V_MAFB_05_M02775 TRANSFAC - 37174359 37174375 0.0E+00 GATAATGCTGACTAAAA 17 V_PROP1_01_M01294 TRANSFAC + 37170219 37170229 2.0E-06 TAATTTATTTT 11 V_RORA_Q4_M01138 TRANSFAC - 37172463 37172473 9.0E-06 AAGATGGGTCA 11 V_ISL2_01_M01328 TRANSFAC + 37170213 37170228 1.0E-06 AACCATTAATTTATTT 16 V_POU3F2_02_M00464 TRANSFAC - 37174370 37174379 2.0E-06 TTATGATAAT 10 V_HFH4_01_M00742 TRANSFAC + 37170217 37170229 7.0E-06 ATTAATTTATTTT 13 V_LHX3_01_M01471 TRANSFAC - 37170213 37170229 9.0E-06 AAAATAAATTAATGGTT 17 V_LHX3_01_M01471 TRANSFAC + 37170214 37170230 3.0E-06 ACCATTAATTTATTTTG 17 V_LHX3A_01_M00510 TRANSFAC + 37170216 37170225 9.0E-06 CATTAATTTA 10 V_HOXD13_01_M01404 TRANSFAC - 37172775 37172790 2.0E-06 ACTTTAATAAAACACC 16 V_PSX1_01_M01435 TRANSFAC - 37170213 37170229 2.0E-06 AAAATAAATTAATGGTT 17 V_NFY_Q6_01_M00775 TRANSFAC - 37172443 37172455 6.0E-06 CTCTGACCAATCA 13 V_PAX6_02_M01391 TRANSFAC - 37170213 37170228 9.0E-06 AAATAAATTAATGGTT 16 V_CETS1P54_02_M00074 TRANSFAC + 37170084 37170096 6.0E-06 CATAAGGAAATTA 13 V_BARBIE_01_M00238 TRANSFAC - 37172346 37172360 0.0E+00 ATATAAAGCTGGTTG 15 V_NFY_C_M00209 TRANSFAC + 37172441 37172454 0.0E+00 TCTGATTGGTCAGA 14 V_ELF4_04_M02850 TRANSFAC + 37172755 37172771 8.0E-06 GTTAAAATCTAAAATAT 17 V_SOX7_03_M02807 TRANSFAC - 37170149 37170170 9.0E-06 GTTGTGTAACAAAAGTAATTTT 22 V_POU3F2_01_M00463 TRANSFAC - 37170217 37170230 8.0E-06 CAAAATAAATTAAT 14 V_DBX2_01_M01360 TRANSFAC + 37170213 37170228 3.0E-06 AACCATTAATTTATTT 16 V_LMX1_01_M01409 TRANSFAC - 37172775 37172791 4.0E-06 CACTTTAATAAAACACC 17 V_KROX_Q6_M00982 TRANSFAC + 37172361 37172374 2.0E-06 CCCGCCCCCGCTGC 14 V_MAZ_Q6_01_M02023 TRANSFAC + 37171848 37171861 4.0E-06 GAAGGTGGGGAGGG 14 V_OCT1_05_M00161 TRANSFAC + 37174367 37174380 4.0E-06 AGCATTATCATAAG 14 V_EGR1_Q6_M01873 TRANSFAC - 37172362 37172371 4.0E-06 GCGGGGGCGG 10 V_E2F2_04_M02846 TRANSFAC + 37172197 37172213 4.0E-06 TGGTTGCCGCCAAAAGC 17 V_NKX52_01_M01315 TRANSFAC - 37170213 37170229 6.0E-06 AAAATAAATTAATGGTT 17 V_ELF5_01_M01197 TRANSFAC + 37170085 37170095 0.0E+00 ATAAGGAAATT 11 V_UNCX4.1_01_M01458 TRANSFAC - 37170214 37170230 3.0E-06 CAAAATAAATTAATGGT 17 V_SP1SP3_Q4_M01219 TRANSFAC + 37172165 37172175 5.0E-06 CCGCCTCCTCC 11 V_SPIB_01_M01204 TRANSFAC + 37170133 37170149 8.0E-06 AATAAGAGGAACAGGCA 17 V_OTP_01_M01323 TRANSFAC + 37170213 37170229 7.0E-06 AACCATTAATTTATTTT 17 V_OTP_01_M01323 TRANSFAC - 37170214 37170230 6.0E-06 CAAAATAAATTAATGGT 17 V_BBX_04_M02843 TRANSFAC + 37172750 37172766 7.0E-06 TGAGCGTTAAAATCTAA 17 V_MEF2_Q6_01_M00941 TRANSFAC + 37172777 37172788 8.0E-06 TGTTTTATTAAA 12 V_NCX_02_M01420 TRANSFAC - 37170212 37170228 4.0E-06 AAATAAATTAATGGTTC 17 V_MAFK_Q3_M02022 TRANSFAC + 37174361 37174371 3.0E-06 TTAGTCAGCAT 11 V_ARID3A_04_M02735 TRANSFAC - 37172775 37172791 6.0E-06 CACTTTAATAAAACACC 17 V_PMX2B_01_M01356 TRANSFAC - 37170214 37170230 3.0E-06 CAAAATAAATTAATGGT 17 V_TBP_06_M02814 TRANSFAC - 37170216 37170231 7.0E-06 GCAAAATAAATTAATG 16 V_LHX3b_01_M01971 TRANSFAC + 37170216 37170225 7.0E-06 CATTAATTTA 10 V_SOX11_03_M02795 TRANSFAC + 37172796 37172812 4.0E-06 TTGTGAACAAAGGGAGA 17 V_EMX2_01_M01461 TRANSFAC - 37170213 37170229 1.0E-05 AAAATAAATTAATGGTT 17 V_FXR_IR1_Q6_M00767 TRANSFAC - 37172991 37173003 5.0E-06 AGGTCTCTGACCC 13 V_CAAT_01_M00254 TRANSFAC - 37172443 37172454 3.0E-06 TCTGACCAATCA 12 V_GFI1_Q6_M01067 TRANSFAC + 37173002 37173014 9.0E-06 CTAAATCCCTGGC 13 V_ALPHACP1_01_M00687 TRANSFAC + 37170128 37170138 8.0E-06 CAGCCAATAAG 11 V_CREBP1_Q2_M00179 TRANSFAC - 37172338 37172349 9.0E-06 GTTGACGTCAAT 12 V_BRN4_01_M01473 TRANSFAC + 37170212 37170228 1.0E-05 GAACCATTAATTTATTT 17 V_IPF1_05_M01255 TRANSFAC + 37170213 37170224 8.0E-06 AACCATTAATTT 12 V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC - 37172215 37172223 8.0E-06 GAGGGTGGG 9 V_ZFP206_01_M01742 TRANSFAC - 37172565 37172575 1.0E-06 TGCGCAGGCGC 11 V_NFY_01_M00287 TRANSFAC + 37170126 37170141 5.0E-06 CACAGCCAATAAGAGG 16 V_NFY_01_M00287 TRANSFAC - 37172439 37172454 1.0E-06 TCTGACCAATCAGAAA 16 V_LMX1B_01_M01363 TRANSFAC - 37170214 37170230 8.0E-06 CAAAATAAATTAATGGT 17 V_LMX1B_01_M01363 TRANSFAC + 37172775 37172791 9.0E-06 GGTGTTTTATTAAAGTG 17 V_FPM315_01_M01587 TRANSFAC - 37172170 37172181 3.0E-06 GGAGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC - 37172173 37172184 7.0E-06 CGAGGAGGAGGA 12 V_PLZF_02_M01075 TRANSFAC + 37170083 37170111 2.0E-06 CCATAAGGAAATTAAAGCTCAAAAAGTGC 29 V_HSF_Q6_M00641 TRANSFAC + 37172630 37172642 1.0E-06 TTCTCGCGGCTTC 13 V_ESX1_01_M01474 TRANSFAC + 37170213 37170229 6.0E-06 AACCATTAATTTATTTT 17 V_HOXD8_01_M01432 TRANSFAC - 37170212 37170228 0.0E+00 AAATAAATTAATGGTTC 17 V_SOX4_01_M01308 TRANSFAC + 37172801 37172808 1.0E-05 AACAAAGG 8 V_CREB_02_M00113 TRANSFAC - 37172340 37172351 3.0E-06 TGGTTGACGTCA 12 V_ELF5_04_M02241 TRANSFAC - 37170087 37170095 5.0E-06 AATTTCCTT 9 V_CP2_01_M00072 TRANSFAC + 37172068 37172078 6.0E-06 GCCCTACCCAG 11 V_HMX3_02_M01413 TRANSFAC - 37170213 37170229 5.0E-06 AAAATAAATTAATGGTT 17 V_CMAF_01_M01070 TRANSFAC - 37174357 37174375 1.0E-06 GATAATGCTGACTAAAATC 19 V_IPF1_04_M01236 TRANSFAC + 37170216 37170225 9.0E-06 CATTAATTTA 10 V_NFYA_Q5_M02106 TRANSFAC + 37170128 37170141 4.0E-06 CAGCCAATAAGAGG 14 V_NFYA_Q5_M02106 TRANSFAC - 37172439 37172452 2.0E-06 TGACCAATCAGAAA 14 V_SOX5_04_M02910 TRANSFAC - 37172761 37172775 5.0E-06 CTTCATATTTTAGAT 15 V_ATF_B_M00338 TRANSFAC + 37172339 37172350 1.0E-06 TTGACGTCAACC 12 V_TCF3_05_M02920 TRANSFAC - 37170220 37170234 6.0E-06 GGAGCAAAATAAATT 15 V_GLIS2_04_M02863 TRANSFAC + 37172777 37172790 5.0E-06 TGTTTTATTAAAGT 14 V_SOX9_Q4_M01284 TRANSFAC + 37172800 37172810 3.0E-06 GAACAAAGGGA 11 V_NANOG_02_M01247 TRANSFAC - 37170151 37170170 7.0E-06 GTTGTGTAACAAAAGTAATT 20

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.