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PAPOLA Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 10914 poly(A) polymerase alpha chr14 + 96963712 - 96969212 96968712 Transcription Factor Binding Sites   Download all TFBS in the PAPOLA promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints HSF2_HSF_DBD_trimeric_13_1 SELEX + 96968715 96968727 1.0E-06 TTCTAGAACGTTG 13 HINFP1_C2H2_full_dimeric_19_1 SELEX + 96968661 96968679 6.0E-06 GCGGACGGCGCTGGTGCGC 19 HINFP1_C2H2_full_dimeric_19_1 SELEX - 96968661 96968679 1.0E-06 GCGCACCAGCGCCGTCCGC 19 SOX10_HMG_full_dimeric_15_3 SELEX - 96967899 96967913 3.0E-06 ATCAATGGCAGTCAC 15 IRF7_IRF_DBD_dimeric_14_1 SELEX + 96969268 96969281 4.0E-06 CCGAAAACAAAACA 14 SOX21_HMG_DBD_dimeric_13_2 SELEX - 96967900 96967912 8.0E-06 TCAATGGCAGTCA 13 HSF1_HSF_full_trimeric_13_1 SELEX + 96968715 96968727 3.0E-06 TTCTAGAACGTTG 13 SOX9_HMG_full_dimeric_17_3 SELEX - 96967898 96967914 3.0E-06 CATCAATGGCAGTCACC 17 SOX8_HMG_full_dimeric_17_1 SELEX - 96967898 96967914 6.0E-06 CATCAATGGCAGTCACC 17 SOX7_HMG_full_dimeric_17_2 SELEX - 96967898 96967914 5.0E-06 CATCAATGGCAGTCACC 17 SOX15_HMG_full_dimeric_15_3 SELEX + 96967899 96967913 8.0E-06 GTGACTGCCATTGAT 15 TBX1_TBX_DBD_dimeric_19_1 SELEX + 96971774 96971792 9.0E-06 AGTTCTGAGTATCACACAT 19 TBX1_TBX_DBD_dimeric_19_1 SELEX - 96971774 96971792 9.0E-06 ATGTGTGATACTCAGAACT 19 SOX8_HMG_full_dimeric_13_1 SELEX - 96967901 96967913 2.0E-06 ATCAATGGCAGTC 13 SOX2_HMG_full_dimeric_15_1 SELEX + 96967899 96967913 4.0E-06 GTGACTGCCATTGAT 15 SOX2_HMG_full_dimeric_15_1 SELEX - 96967899 96967913 5.0E-06 ATCAATGGCAGTCAC 15 HSF4_HSF_DBD_trimeric_13_1 SELEX + 96968715 96968727 1.0E-05 TTCTAGAACGTTG 13 RFX5_RFX_DBD_dimeric_16_3 SELEX - 96968723 96968738 6.0E-06 CGCTACCACAGCAACG 16 TBX15_TBX_DBD_dimeric_19_1 SELEX - 96971774 96971792 3.0E-06 ATGTGTGATACTCAGAACT 19 INSM1_MA0155.1 JASPAR - 96968343 96968354 4.0E-06 TGCCAGGGGGTG 12 GRHL1_CP2_DBD_dimeric_10_1 SELEX + 96968256 96968265 6.0E-06 TAACCGGTTC 10 POU3F3_POU_DBD_dimeric_12_1 SELEX - 96963812 96963823 6.0E-06 ATTATTAAGTAA 12 NRF1_NRF_full_dimeric_12_1 SELEX - 96968675 96968686 5.0E-06 TGCGCCTGCGCA 12 Sox2_MA0143.1 JASPAR - 96963811 96963825 6.0E-06 CCATTATTAAGTAAA 15 E2F2_E2F_DBD_dimeric_18_1 SELEX + 96963818 96963835 6.0E-06 AATAATGGCTCCAAAGTG 18 Sox1_HMG_DBD_dimeric_15_2 SELEX - 96967899 96967913 5.0E-06 ATCAATGGCAGTCAC 15 RREB1_MA0073.1 JASPAR + 96973415 96973434 4.0E-06 CCACAAAACAAAAAGAAACA 20 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX - 96968948 96968961 4.0E-06 GAAAACAGAATACA 14 V_DMRT4_01_M01149 TRANSFAC - 96968219 96968231 4.0E-06 AAAGTAACAAGTA 13 V_FOXP1_01_M00987 TRANSFAC + 96968943 96968962 1.0E-06 TAATTTGTATTCTGTTTTCT 20 V_FOXP1_01_M00987 TRANSFAC - 96969247 96969266 9.0E-06 TTGTTTTGATTTTCTTTGTG 20 V_MEIS1_02_M01419 TRANSFAC + 96963765 96963780 1.0E-05 GATCAACTGTCAAATA 16 V_TCF3_01_M01594 TRANSFAC - 96973416 96973428 7.0E-06 TTTTTGTTTTGTG 13 V_TBX15_01_M01263 TRANSFAC + 96971774 96971792 7.0E-06 AGTTCTGAGTATCACACAT 19 V_AR_02_M00953 TRANSFAC - 96964061 96964087 3.0E-06 AGAAGGGGGAAGATGTGTTCTACTGGA 27 V_PLAGL1_04_M02890 TRANSFAC + 96968308 96968324 1.0E-06 GCTGGGGGGTACATACG 17 V_MYB_03_M02883 TRANSFAC + 96963764 96963779 3.0E-06 GGATCAACTGTCAAAT 16 V_HMGIY_Q3_M01010 TRANSFAC - 96969249 96969263 8.0E-06 TTTTGATTTTCTTTG 15 V_BCL6_01_M01183 TRANSFAC - 96969250 96969265 2.0E-06 TGTTTTGATTTTCTTT 16 V_ERR3_Q2_01_M02094 TRANSFAC - 96969467 96969479 5.0E-06 AGACAAGGTCAGT 13 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC - 96963771 96963782 1.0E-06 AATATTTGACAG 12 V_SRY_02_M00160 TRANSFAC + 96969270 96969281 3.0E-06 GAAAACAAAACA 12 V_GABPA_04_M02858 TRANSFAC + 96964072 96964087 2.0E-06 ACATCTTCCCCCTTCT 16 V_REX1_01_M01695 TRANSFAC - 96963820 96963829 1.0E-05 GGAGCCATTA 10 V_TGIF2_01_M01407 TRANSFAC + 96963765 96963780 5.0E-06 GATCAACTGTCAAATA 16 V_RPC155_01_M01798 TRANSFAC + 96973377 96973392 0.0E+00 TTACAAGTTCAAGACC 16 V_TAL1_Q6_M00993 TRANSFAC + 96968101 96968110 7.0E-06 TCCATCTGGT 10 V_ROAZ_01_M00467 TRANSFAC - 96968327 96968340 8.0E-06 GCACCCACGCGTGC 14 V_POU3F2_01_M00463 TRANSFAC + 96968020 96968033 5.0E-06 ACACATTTATTCGT 14 V_PR_01_M00954 TRANSFAC - 96964061 96964087 1.0E-06 AGAAGGGGGAAGATGTGTTCTACTGGA 27 V_PR_01_M00954 TRANSFAC - 96973475 96973501 2.0E-06 TCTGTTGCAATAAATTGTTCTAGTTGA 27 V_ZFP105_03_M02827 TRANSFAC + 96973417 96973431 1.0E-06 ACAAAACAAAAAGAA 15 V_FOXO1_02_M00474 TRANSFAC - 96969267 96969280 7.0E-06 GTTTTGTTTTCGGG 14 V_CART1_01_M00416 TRANSFAC + 96968940 96968957 8.0E-06 AAGTAATTTGTATTCTGT 18 V_POLY_C_M00212 TRANSFAC - 96973477 96973494 1.0E-06 CAATAAATTGTTCTAGTT 18 V_NFKB_Q6_M00194 TRANSFAC + 96969069 96969082 7.0E-06 TGGGGACCTTCCTG 14 V_AP1_Q4_M00188 TRANSFAC - 96963733 96963743 1.0E-06 AGTGACTAACT 11 V_RXRA_04_M02895 TRANSFAC - 96967872 96967887 5.0E-06 TAGCAAAGGTTGTCTT 16 V_MAZ_Q6_01_M02023 TRANSFAC - 96968834 96968847 1.0E-06 GAGGGAGGGGGGGG 14 V_HNF3_Q6_M00791 TRANSFAC + 96968033 96968045 8.0E-06 TTCAACAAATATT 13 V_PAX5_01_M00143 TRANSFAC - 96968480 96968507 8.0E-06 CTCGTGGGCAGTGCGGCGTGGACGGCGC 28 V_SOX18_03_M02801 TRANSFAC - 96973477 96973492 4.0E-06 ATAAATTGTTCTAGTT 16 V_GADP_01_M01258 TRANSFAC - 96968431 96968442 5.0E-06 CGCTTCCGGCGC 12 V_GR_01_M00955 TRANSFAC - 96973475 96973501 2.0E-06 TCTGTTGCAATAAATTGTTCTAGTTGA 27 V_SP1SP3_Q4_M01219 TRANSFAC + 96968834 96968844 2.0E-06 CCCCCCCCTCC 11 V_MEF2_04_M00233 TRANSFAC + 96968075 96968096 6.0E-06 ACTGGTGGTTAAAACAGACGGA 22 V_NKX3A_01_M00451 TRANSFAC - 96963810 96963821 4.0E-06 TATTAAGTAAAA 12 V_NKX3A_01_M00451 TRANSFAC - 96964048 96964059 2.0E-06 TTTTAAGTATAG 12 V_CTCF_02_M01259 TRANSFAC - 96968099 96968118 4.0E-06 TGCGTCCCACCAGATGGAGC 20 V_INSM1_01_M02268 TRANSFAC - 96968343 96968354 4.0E-06 TGCCAGGGGGTG 12 V_BLIMP1_Q6_M01066 TRANSFAC + 96968121 96968136 3.0E-06 CTGGGAGGGAAAGGGA 16 V_GATA4_Q3_M00632 TRANSFAC + 96964099 96964110 2.0E-06 AGAAAACAGGCA 12 V_TFIII_Q6_M00706 TRANSFAC + 96969005 96969013 1.0E-05 AGAGGTAGG 9 V_ZNF515_01_M01231 TRANSFAC + 96968309 96968318 5.0E-06 CTGGGGGGTA 10 V_GCNF_01_M00526 TRANSFAC + 96973378 96973395 3.0E-06 TACAAGTTCAAGACCAGC 18 V_HAND1E47_01_M00222 TRANSFAC - 96969424 96969439 1.0E-06 ACAGGCATCTGGAAAT 16 V_FAC1_01_M00456 TRANSFAC + 96973415 96973428 3.0E-06 CCACAAAACAAAAA 14 V_CEBPA_01_M00116 TRANSFAC + 96963809 96963822 5.0E-06 ATTTTACTTAATAA 14 V_OCT1_Q6_M00195 TRANSFAC - 96968942 96968956 3.0E-06 CAGAATACAAATTAC 15 V_FOXJ3_06_M02855 TRANSFAC + 96969270 96969286 1.0E-06 GAAAACAAAACATTGCC 17 V_CPHX_01_M01478 TRANSFAC + 96963758 96963771 2.0E-06 GTGATCGGATCAAC 14 V_NKX61_02_M01469 TRANSFAC + 96963814 96963829 5.0E-06 ACTTAATAATGGCTCC 16 V_AIRE_01_M00999 TRANSFAC - 96967864 96967889 1.0E-06 TTTAGCAAAGGTTGTCTTGGTCATAA 26 V_ZFP206_01_M01742 TRANSFAC + 96968675 96968685 1.0E-06 TGCGCAGGCGC 11 V_ZFP206_01_M01742 TRANSFAC - 96968676 96968686 8.0E-06 TGCGCCTGCGC 11 V_BDP1_01_M01796 TRANSFAC - 96973381 96973392 7.0E-06 GGTCTTGAACTT 12 V_NKX22_01_M00485 TRANSFAC - 96968216 96968225 9.0E-06 ACAAGTACTT 10 V_ZBTB12_03_M02824 TRANSFAC - 96968712 96968728 1.0E-06 GCAACGTTCTAGAACTG 17 V_SOX21_04_M02907 TRANSFAC - 96973477 96973493 2.0E-06 AATAAATTGTTCTAGTT 17 V_SOX2_01_M02246 TRANSFAC - 96963811 96963825 6.0E-06 CCATTATTAAGTAAA 15 V_HSF2_02_M01244 TRANSFAC - 96968715 96968727 1.0E-06 CAACGTTCTAGAA 13 V_FOXJ2_01_M00422 TRANSFAC + 96968031 96968048 5.0E-06 CGTTCAACAAATATTTCA 18 V_SOX2_Q6_M01272 TRANSFAC - 96973417 96973432 3.0E-06 TTTCTTTTTGTTTTGT 16 V_PR_02_M00957 TRANSFAC - 96964061 96964087 2.0E-06 AGAAGGGGGAAGATGTGTTCTACTGGA 27 V_PR_02_M00957 TRANSFAC - 96973475 96973501 5.0E-06 TCTGTTGCAATAAATTGTTCTAGTTGA 27 V_SOX12_03_M02796 TRANSFAC - 96973477 96973490 5.0E-06 AAATTGTTCTAGTT 14 V_TCF3_05_M02920 TRANSFAC + 96969266 96969280 4.0E-06 ACCCGAAAACAAAAC 15 V_DMRT1_01_M01146 TRANSFAC + 96968222 96968236 4.0E-06 TTGTTACTTTGCAGT 15 V_GLIS2_04_M02863 TRANSFAC - 96963810 96963823 5.0E-06 ATTATTAAGTAAAA 14 V_AP2_Q3_M00800 TRANSFAC - 96968530 96968545 1.0E-06 GGCCCCGGGCGGTGAG 16 V_NANOG_02_M01247 TRANSFAC + 96969250 96969269 9.0E-06 AAAGAAAATCAAAACAACCC 20 V_NANOG_02_M01247 TRANSFAC + 96973414 96973433 7.0E-06 TCCACAAAACAAAAAGAAAC 20 V_OCT4_01_M01125 TRANSFAC - 96963810 96963824 7.0E-06 CATTATTAAGTAAAA 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.