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POP4


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
10775 processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae) chr19 +30092169 - 30097669 30097169

Transcription Factor Binding Sites

 
Download all TFBS in the POP4 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
CTCF_MA0139.1 JASPAR + 30101660 30101678 1.0E-06 CTGCCACAAGAGGGCAGCC 19
Sox17_MA0078.1 JASPAR + 30101726 30101734 7.0E-06 CTCATTGTC 9
POU2F1_POU_DBD_dimeric_14_1 SELEX + 30096592 30096605 8.0E-06 AATAAATATTCTGA 14
FOXG1_forkhead_DBD_dimeric_17_1 SELEX + 30096583 30096599 9.0E-06 ATAAAAACTAATAAATA 17
SCRT2_C2H2_DBD_monomeric_13_1 SELEX - 30097314 30097326 4.0E-06 CAGCAACAGGTAG 13
HOMEZ_HOMEZ_DBD_monomer-or-dimer_12_1 SELEX + 30096586 30096597 6.0E-06 AAAACTAATAAA 12
SPIB_ETS_DBD_monomeric_14_1 SELEX + 30101827 30101840 0.0E+00 GAAAAGAGGAACTG 14
BARHL2_homeodomain_full_dimeric_16_1 SELEX + 30096584 30096599 7.0E-06 TAAAAACTAATAAATA 16
Barhl1_homeodomain_DBD_dimeric_16_1 SELEX + 30096584 30096599 4.0E-06 TAAAAACTAATAAATA 16
POU6F2_POU_DBD_dimeric_16_1 SELEX + 30096731 30096746 6.0E-06 TTAAACAGCTAGTTAG 16
POU6F2_POU_DBD_dimeric_16_1 SELEX - 30096731 30096746 6.0E-06 CTAACTAGCTGTTTAA 16
Esrra_nuclearreceptor_DBD_dimeric_17_1 SELEX + 30097263 30097279 9.0E-06 GGGGACGTTAAGGGTCG 17
Ascl2_bHLH_DBD_dimeric_10_1 SELEX + 30097180 30097189 6.0E-06 AGCAGCTGCC 10
MAFK_bZIP_full_dimeric_15_1 SELEX + 30097226 30097240 9.0E-06 ATGAAGAGTAAGCGG 15
SCRT1_C2H2_DBD_monomeric_15_1 SELEX - 30097312 30097326 3.0E-06 CAGCAACAGGTAGCC 15
Foxd3_MA0041.1 JASPAR - 30096587 30096598 9.0E-06 ATTTATTAGTTT 12
Myf_MA0055.1 JASPAR + 30097176 30097187 8.0E-06 CGACAGCAGCTG 12
SPDEF_ETS_full_putative-multimer_16_1 SELEX + 30101824 30101839 7.0E-06 ACAGAAAAGAGGAACT 16
SPI1_ETS_full_monomeric_14_1 SELEX + 30101827 30101840 1.0E-06 GAAAAGAGGAACTG 14
THRB_nuclearreceptor_DBD_dimeric_19_1 SELEX + 30096716 30096734 8.0E-06 GTGCCCTAAGCGAGGTTAA 19
THRB_nuclearreceptor_DBD_dimeric_19_1 SELEX - 30096716 30096734 6.0E-06 TTAACCTCGCTTAGGGCAC 19
RREB1_MA0073.1 JASPAR - 30102029 30102048 2.0E-06 CCCCAAGACACCCACACTCA 20
V_FOXP1_01_M00987 TRANSFAC + 30101843 30101862 6.0E-06 ATGTTTTTAGTGTGTATTAC 20
V_SPI1_01_M01203 TRANSFAC + 30101827 30101843 1.0E-06 GAAAAGAGGAACTGATA 17
V_MSX3_01_M01341 TRANSFAC + 30096585 30096600 1.0E-06 AAAAACTAATAAATAT 16
V_DBX1_01_M01483 TRANSFAC + 30096583 30096599 2.0E-06 ATAAAAACTAATAAATA 17
TAL1_TCF3_MA0091.1 JASPAR + 30101773 30101784 1.0E-05 AGTACATCTGTT 12
V_NRSF_Q4_M01028 TRANSFAC + 30101561 30101579 4.0E-06 TTTCTGCCCGCGGTGCTTA 19
V_FOXD3_01_M00130 TRANSFAC - 30096587 30096598 6.0E-06 ATTTATTAGTTT 12
V_TCF4_Q5_01_M02033 TRANSFAC + 30096630 30096639 5.0E-06 ATCAAAGGGA 10
V_ISL2_01_M01328 TRANSFAC + 30096585 30096600 5.0E-06 AAAAACTAATAAATAT 16
V_NKX25_Q6_M02108 TRANSFAC - 30096690 30096700 3.0E-06 CTCACTTGCAG 11
V_PU1_Q4_M01172 TRANSFAC - 30101828 30101846 0.0E+00 ACATATCAGTTCCTCTTTT 19
V_HOXD13_01_M01404 TRANSFAC + 30096587 30096602 8.0E-06 AAACTAATAAATATTC 16
V_PSX1_01_M01435 TRANSFAC - 30096585 30096601 8.0E-06 AATATTTATTAGTTTTT 17
V_NKX62_Q2_M00489 TRANSFAC + 30096590 30096601 4.0E-06 CTAATAAATATT 12
V_TRF1_01_M01237 TRANSFAC - 30096976 30096990 5.0E-06 GTAGGGTTGGGGTAA 15
V_FOXA2_02_M02853 TRANSFAC + 30096586 30096600 4.0E-06 AAAACTAATAAATAT 15
V_FOXA2_02_M02853 TRANSFAC + 30096624 30096638 7.0E-06 GAAACTATCAAAGGG 15
V_MYF_01_M01302 TRANSFAC + 30097176 30097187 8.0E-06 CGACAGCAGCTG 12
V_SPI1_03_M02078 TRANSFAC + 30101831 30101840 1.0E-05 AGAGGAACTG 10
V_LMX1_01_M01409 TRANSFAC + 30096586 30096602 9.0E-06 AAAACTAATAAATATTC 17
V_HOXB13_01_M01467 TRANSFAC + 30096587 30096602 1.0E-06 AAACTAATAAATATTC 16
V_GATA3_05_M02859 TRANSFAC - 30096576 30096597 0.0E+00 TTTATTAGTTTTTATCAATAAA 22
V_PAX9_B_M00329 TRANSFAC + 30097020 30097043 6.0E-06 AAGACCCCAGGAAGCGAGCCCACT 24
V_MAZ_Q6_01_M02023 TRANSFAC - 30097038 30097051 7.0E-06 TGGGGAGGAGTGGG 14
V_HNF1_Q6_01_M01011 TRANSFAC + 30096578 30096598 9.0E-06 TATTGATAAAAACTAATAAAT 21
V_ASCL2_03_M02737 TRANSFAC + 30097177 30097193 5.0E-06 GACAGCAGCTGCCAGTG 17
V_ISRE_01_M00258 TRANSFAC - 30101826 30101840 9.0E-06 CAGTTCCTCTTTTCT 15
V_GADP_01_M01258 TRANSFAC - 30097206 30097217 5.0E-06 CGCTTCCGGCGC 12
V_SPIB_01_M01204 TRANSFAC + 30101827 30101843 1.0E-06 GAAAAGAGGAACTGATA 17
V_ERBETA_Q5_M01875 TRANSFAC + 30096630 30096644 1.0E-05 ATCAAAGGGACCCAG 15
V_XFD2_01_M00268 TRANSFAC + 30096590 30096603 5.0E-06 CTAATAAATATTCT 14
V_RFX_Q6_M00975 TRANSFAC - 30101790 30101798 4.0E-06 CTGTTGCCA 9
V_NCX_02_M01420 TRANSFAC + 30096583 30096599 4.0E-06 ATAAAAACTAATAAATA 17
V_CTCF_02_M01259 TRANSFAC + 30101657 30101676 0.0E+00 CGTCTGCCACAAGAGGGCAG 20
V_CTCF_01_M01200 TRANSFAC + 30101659 30101678 0.0E+00 TCTGCCACAAGAGGGCAGCC 20
V_NKX63_01_M01470 TRANSFAC - 30096586 30096602 6.0E-06 GAATATTTATTAGTTTT 17
V_ALPHACP1_01_M00687 TRANSFAC - 30101726 30101736 1.0E-05 CAGACAATGAG 11
V_LEF1_Q2_01_M01022 TRANSFAC + 30096629 30096638 6.0E-06 TATCAAAGGG 10
V_CEBPA_01_M00116 TRANSFAC + 30101905 30101918 7.0E-06 TCATTGCCAAAGCA 14
V_BARHL1_01_M01332 TRANSFAC + 30096585 30096600 5.0E-06 AAAAACTAATAAATAT 16
V_PARP_Q3_M01211 TRANSFAC + 30097370 30097379 8.0E-06 TAAGAAAAAC 10
V_LMX1B_01_M01363 TRANSFAC + 30096585 30096601 5.0E-06 AAAAACTAATAAATATT 17
V_LMX1B_01_M01363 TRANSFAC - 30096586 30096602 3.0E-06 GAATATTTATTAGTTTT 17
V_HNF1B_01_M01425 TRANSFAC - 30096735 30096751 2.0E-06 TGCTGCTAACTAGCTGT 17
V_ZBTB12_03_M02824 TRANSFAC - 30096756 30096772 5.0E-06 CTTAGGTTCTAGTTCCG 17
V_ASCL2_04_M02841 TRANSFAC + 30096868 30096883 9.0E-06 CCGTCCCCGTCCCATT 16
V_FOX_Q2_M00809 TRANSFAC - 30096590 30096602 8.0E-06 GAATATTTATTAG 13
V_PLZF_02_M01075 TRANSFAC + 30096572 30096600 4.0E-06 TTTTTTTATTGATAAAAACTAATAAATAT 29
V_HSF_Q6_M00641 TRANSFAC + 30101935 30101947 1.0E-06 TTTCAGAAGTTTC 13
V_HOMEZ_01_M01429 TRANSFAC - 30096582 30096598 8.0E-06 ATTTATTAGTTTTTATC 17
V_RFX3_04_M02788 TRANSFAC + 30101781 30101803 7.0E-06 TGTTGCCCATGGCAACAGGCTGT 23
V_BRN3C_01_M01408 TRANSFAC - 30096587 30096602 7.0E-06 GAATATTTATTAGTTT 16
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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