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RAI2


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
10742 retinoic acid induced 2 chrX -17878957 - 17884457 17879457

Transcription Factor Binding Sites

 
Download all TFBS in the RAI2 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
MYF6_bHLH_full_dimeric_10_1 SELEX + 17878302 17878311 9.0E-06 AGCAGCTGTT 10
Pax4_MA0068.1 JASPAR + 17877751 17877780 5.0E-06 AAAATATTTACACATCCTTAAAAACGCCAG 30
Ascl2_bHLH_DBD_dimeric_10_1 SELEX + 17878302 17878311 3.0E-06 AGCAGCTGTT 10
Ascl2_bHLH_DBD_dimeric_10_1 SELEX - 17878302 17878311 1.0E-06 AACAGCTGCT 10
Tcf21_bHLH_DBD_dimeric_14_1 SELEX - 17878300 17878313 6.0E-06 CAAACAGCTGCTGC 14
ZSCAN4_C2H2_full_monomeric_15_1 SELEX + 17877759 17877773 1.0E-06 TACACATCCTTAAAA 15
Klf12_C2H2_DBD_monomeric_15_1 SELEX - 17879579 17879593 3.0E-06 GGCCACGCCCTCCCC 15
Myf_MA0055.1 JASPAR + 17878298 17878309 1.0E-06 AAGCAGCAGCTG 12
Myf_MA0055.1 JASPAR - 17878301 17878312 1.0E-06 AAACAGCTGCTG 12
FOXO3_forkhead_full_putatively-multimeric_11_1 SELEX + 17878356 17878366 1.0E-06 TTTCCCCACCC 11
FOXO1_forkhead_DBD_putatively-multimeric_12_1 SELEX + 17878356 17878367 4.0E-06 TTTCCCCACCCA 12
MSC_bHLH_full_dimeric_10_1 SELEX - 17878302 17878311 4.0E-06 AACAGCTGCT 10
E2F2_E2F_DBD_dimeric_18_1 SELEX - 17878307 17878324 9.0E-06 AGAAATGTTGCCAAACAG 18
V_E2A_Q6_01_M02088 TRANSFAC - 17878300 17878312 6.0E-06 AAACAGCTGCTGC 13
V_GKLF_02_M01588 TRANSFAC - 17879581 17879592 4.0E-06 GCCACGCCCTCC 12
V_AP4_Q6_01_M00927 TRANSFAC - 17878303 17878311 1.0E-05 AACAGCTGC 9
V_PAX_Q6_M00808 TRANSFAC + 17879268 17879278 3.0E-06 CTGGAACTCTC 11
V_MYF_01_M01302 TRANSFAC + 17878298 17878309 1.0E-06 AAGCAGCAGCTG 12
V_MYF_01_M01302 TRANSFAC - 17878301 17878312 1.0E-06 AAACAGCTGCTG 12
V_MAZ_Q6_01_M02023 TRANSFAC - 17877945 17877958 5.0E-06 AGAGGTGGGGAGGG 14
V_STAT5A_02_M00460 TRANSFAC + 17877910 17877933 9.0E-06 TTCCGGGAACACGGTCACCCAGAC 24
V_ASCL2_03_M02737 TRANSFAC - 17878298 17878314 2.0E-06 CCAAACAGCTGCTGCTT 17
V_PAX6_Q2_M00979 TRANSFAC + 17879263 17879276 2.0E-06 GTGTGCTGGAACTC 14
V_MAF_Q6_01_M00983 TRANSFAC - 17877966 17877976 7.0E-06 TGCAGAGTCAG 11
V_NRF2_Q4_M00821 TRANSFAC - 17877965 17877977 3.0E-06 TTGCAGAGTCAGG 13
V_MYF6_03_M02781 TRANSFAC + 17878298 17878313 9.0E-06 AAGCAGCAGCTGTTTG 16
V_NFE2_Q6_M02104 TRANSFAC + 17877965 17877980 2.0E-06 CCTGACTCTGCAAGCA 16
V_CMAF_01_M01070 TRANSFAC - 17877738 17877756 4.0E-06 TATTTTGCTGAGGATAAGT 19
V_DMRT1_01_M01146 TRANSFAC + 17878312 17878326 9.0E-06 TGGCAACATTTCTAC 15
V_BRCA_01_M01082 TRANSFAC + 17877725 17877732 1.0E-05 TTCTGTTG 8
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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