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RBBP9 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 10741 retinoblastoma binding protein 9 chr20 - 18477387 - 18482887 18477887 Transcription Factor Binding Sites   Download all TFBS in the RBBP9 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NF-kappaB_MA0061.1 JASPAR - 18477407 18477416 6.0E-06 GGGACTTCCC 10 IRF7_IRF_DBD_dimeric_14_1 SELEX + 18479892 18479905 8.0E-06 CCGAAACCCAAAAT 14 KLF16_C2H2_DBD_monomeric_11_1 SELEX - 18477441 18477451 1.0E-05 GCCCCGCCCCC 11 IRF8_IRF_full_dimeric_14_1 SELEX + 18479886 18479899 6.0E-06 CTGAGACCGAAACC 14 EWSR1-FLI1_MA0149.1 JASPAR - 18477658 18477675 6.0E-06 GGAGGGAGGGACGGCGGG 18 NR2F1_MA0017.1 JASPAR + 18476920 18476933 1.0E-05 TGACCTTTGGGGTT 14 Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 18473719 18473729 1.0E-05 ACAAATAAAAA 11 Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 18477045 18477055 8.0E-06 AAAAATAAAAA 11 SP1_MA0079.2 JASPAR - 18477441 18477450 7.0E-06 CCCCGCCCCC 10 znf143_MA0088.1 JASPAR - 18477888 18477907 3.0E-06 CAACTCCCAGGATGCCGCGG 20 SP4_C2H2_full_monomeric_17_1 SELEX - 18477438 18477454 9.0E-06 TGAGCCCCGCCCCCCGT 17 FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 18473719 18473729 7.0E-06 ACAAATAAAAA 11 FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 18477045 18477055 4.0E-06 AAAAATAAAAA 11 IRF9_IRF_full_trimeric_15_1 SELEX + 18479891 18479905 8.0E-06 ACCGAAACCCAAAAT 15 HOXC13_homeodomain_DBD_monomeric_10_1 SELEX + 18473720 18473729 9.0E-06 CAAATAAAAA 10 IRF4_IRF_full_dimeric_15_1 SELEX + 18479886 18479900 4.0E-06 CTGAGACCGAAACCC 15 IRF4_IRF_full_dimeric_15_1 SELEX + 18479892 18479906 7.0E-06 CCGAAACCCAAAATG 15 CPEB1_RRM_full_monomeric_8_1 SELEX + 18477048 18477055 4.0E-06 AATAAAAA 8 IRF3_IRF_full_trimeric_21_1 SELEX + 18479886 18479906 5.0E-06 CTGAGACCGAAACCCAAAATG 21 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 18477043 18477055 2.0E-06 TAAAAAATAAAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 18473719 18473731 9.0E-06 ACAAATAAAAACT 13 HNF1A_MA0046.1 JASPAR + 18477040 18477053 4.0E-06 GGTTAAAAAATAAA 14 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX + 18477045 18477058 8.0E-06 AAAAATAAAAATCA 14 V_NFKB_C_M00208 TRANSFAC - 18477406 18477417 2.0E-06 TGGGACTTCCCA 12 V_DBX1_01_M01483 TRANSFAC + 18477042 18477058 3.0E-06 TTAAAAAATAAAAATCA 17 V_NFKB_Q6_01_M00774 TRANSFAC + 18477402 18477417 4.0E-06 TATCTGGGAAGTCCCA 16 V_LEF1_04_M02774 TRANSFAC - 18477468 18477484 4.0E-06 AACCCCTTTGAACTACC 17 V_APOLYA_B_M00310 TRANSFAC + 18477621 18477635 2.0E-06 ATTAGACGCCTATTC 15 V_OSF2_Q6_M00731 TRANSFAC - 18473602 18473609 1.0E-05 ACCACAAA 8 V_CEBP_Q3_M00770 TRANSFAC + 18473661 18473672 2.0E-06 AAATTTGGCAAG 12 V_HMGIY_Q3_M01010 TRANSFAC - 18477042 18477056 4.0E-06 ATTTTTATTTTTTAA 15 V_BCL6_01_M01183 TRANSFAC - 18477045 18477060 5.0E-06 TTTGATTTTTATTTTT 16 V_AML3_Q6_M01856 TRANSFAC - 18473603 18473610 1.0E-05 AACCACAA 8 V_HOXA13_02_M01297 TRANSFAC + 18477047 18477055 4.0E-06 AAATAAAAA 9 V_SP1_Q6_01_M00931 TRANSFAC + 18477442 18477451 4.0E-06 GGGGCGGGGC 10 V_FOXO3A_Q1_M01137 TRANSFAC + 18477044 18477055 7.0E-06 AAAAAATAAAAA 12 V_SOX11_04_M02899 TRANSFAC + 18477397 18477410 8.0E-06 AAAATTATCTGGGA 14 V_SP1_03_M02281 TRANSFAC - 18477441 18477450 7.0E-06 CCCCGCCCCC 10 V_TR4_Q2_M01725 TRANSFAC + 18476918 18476928 0.0E+00 CCTGACCTTTG 11 V_COUPTF_Q6_M01036 TRANSFAC - 18477055 18477077 4.0E-06 TAGGCTGACCTGTGCCGTTTGAT 23 V_CEBPB_01_M00109 TRANSFAC + 18473653 18473666 0.0E+00 AGGTTATGAAATTT 14 V_CEBPB_01_M00109 TRANSFAC + 18473661 18473674 7.0E-06 AAATTTGGCAAGAT 14 V_AR_03_M00956 TRANSFAC - 18479853 18479879 4.0E-06 ATTTATAGGTTTTGGTGTTCTCATGGT 27 V_ELF4_04_M02850 TRANSFAC + 18473717 18473733 1.0E-06 GGACAAATAAAAACTAT 17 V_ELF4_04_M02850 TRANSFAC + 18477040 18477056 1.0E-06 GGTTAAAAAATAAAAAT 17 V_ELF4_04_M02850 TRANSFAC + 18477041 18477057 0.0E+00 GTTAAAAAATAAAAATC 17 V_TCF3_04_M02816 TRANSFAC + 18477468 18477484 8.0E-06 GGTAGTTCAAAGGGGTT 17 V_CEBPE_Q6_M01868 TRANSFAC - 18473655 18473668 1.0E-06 CCAAATTTCATAAC 14 V_PR_01_M00954 TRANSFAC - 18479853 18479879 4.0E-06 ATTTATAGGTTTTGGTGTTCTCATGGT 27 V_ZFP105_03_M02827 TRANSFAC + 18473718 18473732 4.0E-06 GACAAATAAAAACTA 15 V_ZFP105_03_M02827 TRANSFAC + 18477041 18477055 3.0E-06 GTTAAAAAATAAAAA 15 V_ZFP105_03_M02827 TRANSFAC + 18477044 18477058 1.0E-06 AAAAAATAAAAATCA 15 V_COUP_01_M00158 TRANSFAC + 18476920 18476933 1.0E-05 TGACCTTTGGGGTT 14 V_HNF1_Q6_M00790 TRANSFAC - 18477038 18477055 7.0E-06 TTTTTATTTTTTAACCCT 18 V_AML2_01_M01759 TRANSFAC - 18473603 18473610 1.0E-05 AACCACAA 8 V_CEBPD_Q6_M00621 TRANSFAC - 18473654 18473665 2.0E-06 AATTTCATAACC 12 V_IRX4_01_M01410 TRANSFAC - 18477385 18477401 6.0E-06 ATTTTACATGTTCACTG 17 V_IRX4_01_M01410 TRANSFAC + 18477386 18477402 0.0E+00 AGTGAACATGTAAAATT 17 V_HOXA3_07_M02869 TRANSFAC + 18479867 18479880 8.0E-06 AAAACCTATAAATG 14 V_NFKB_Q6_M00194 TRANSFAC - 18477405 18477418 8.0E-06 TTGGGACTTCCCAG 14 V_SP1_Q6_M00196 TRANSFAC + 18477440 18477452 0.0E+00 GGGGGGCGGGGCT 13 V_IRF3_Q3_M01279 TRANSFAC + 18478052 18478064 4.0E-06 TGTTTTTCCCTTA 13 V_SFPI1_04_M02896 TRANSFAC - 18478055 18478068 8.0E-06 TAAATAAGGGAAAA 14 V_OCT1_04_M00138 TRANSFAC + 18477041 18477063 1.0E-05 GTTAAAAAATAAAAATCAAACGG 23 V_PITX3_01_M01343 TRANSFAC + 18477615 18477630 7.0E-06 GAGGGGATTAGACGCC 16 V_GR_01_M00955 TRANSFAC - 18479853 18479879 4.0E-06 ATTTATAGGTTTTGGTGTTCTCATGGT 27 V_ERR1_Q3_M01841 TRANSFAC + 18476917 18476931 7.0E-06 CCCTGACCTTTGGGG 15 V_TCF7_03_M02817 TRANSFAC + 18477468 18477484 8.0E-06 GGTAGTTCAAAGGGGTT 17 V_NCX_02_M01420 TRANSFAC + 18477043 18477059 7.0E-06 TAAAAAATAAAAATCAA 17 V_POU6F1_01_M00465 TRANSFAC - 18479874 18479884 4.0E-06 ACATCATTTAT 11 V_TBP_06_M02814 TRANSFAC + 18477042 18477057 1.0E-05 TTAAAAAATAAAAATC 16 V_IRX3_01_M01318 TRANSFAC - 18477385 18477401 6.0E-06 ATTTTACATGTTCACTG 17 V_IRX3_01_M01318 TRANSFAC + 18477386 18477402 0.0E+00 AGTGAACATGTAAAATT 17 V_NR1B1_Q6_M02110 TRANSFAC - 18476918 18476927 9.0E-06 AAAGGTCAGG 10 V_IRX5_01_M01472 TRANSFAC - 18477385 18477401 8.0E-06 ATTTTACATGTTCACTG 17 V_IRX5_01_M01472 TRANSFAC + 18477386 18477402 0.0E+00 AGTGAACATGTAAAATT 17 V_HOXD9_Q2_M01834 TRANSFAC + 18473719 18473728 8.0E-06 ACAAATAAAA 10 V_SP4_Q5_M01273 TRANSFAC - 18477441 18477451 1.0E-06 GCCCCGCCCCC 11 V_IRX3_02_M01485 TRANSFAC + 18477386 18477402 0.0E+00 AGTGAACATGTAAAATT 17 V_MTF1_06_M02882 TRANSFAC + 18477044 18477057 2.0E-06 AAAAAATAAAAATC 14 V_MTF1_06_M02882 TRANSFAC + 18477047 18477060 3.0E-06 AAATAAAAATCAAA 14 V_IRF5_03_M02769 TRANSFAC + 18479887 18479901 7.0E-06 TGAGACCGAAACCCA 15 V_HNF1_01_M00132 TRANSFAC + 18477040 18477054 2.0E-06 GGTTAAAAAATAAAA 15 V_PXR_Q2_M00964 TRANSFAC + 18477038 18477049 2.0E-06 AGGGTTAAAAAA 12 V_TCF4_Q5_M00671 TRANSFAC - 18477473 18477480 1.0E-05 CCTTTGAA 8 V_TBX15_02_M01264 TRANSFAC + 18477383 18477400 6.0E-06 AGCAGTGAACATGTAAAA 18 V_CEBPB_Q6_M01896 TRANSFAC + 18473656 18473665 7.0E-06 TTATGAAATT 10 V_IRF6_03_M02770 TRANSFAC + 18479888 18479904 3.0E-06 GAGACCGAAACCCAAAA 17 V_IRX2_01_M01405 TRANSFAC + 18477386 18477402 0.0E+00 AGTGAACATGTAAAATT 17 V_LEF1TCF1_Q4_M00978 TRANSFAC - 18477979 18477989 1.0E-05 GCTTTGTTCTT 11 V_NFKAPPAB_01_M00054 TRANSFAC - 18477407 18477416 7.0E-06 GGGACTTCCC 10 V_NUR77_Q5_M01217 TRANSFAC + 18476919 18476928 7.0E-06 CTGACCTTTG 10 V_SRF_06_M02916 TRANSFAC + 18473717 18473733 6.0E-06 GGACAAATAAAAACTAT 17 V_SRF_06_M02916 TRANSFAC + 18477040 18477056 1.0E-06 GGTTAAAAAATAAAAAT 17 V_SRF_06_M02916 TRANSFAC + 18477041 18477057 0.0E+00 GTTAAAAAATAAAAATC 17 V_SRF_06_M02916 TRANSFAC + 18477042 18477058 2.0E-06 TTAAAAAATAAAAATCA 17 V_EWSR1FLI1_01_M02252 TRANSFAC - 18477658 18477675 6.0E-06 GGAGGGAGGGACGGCGGG 18 V_RFX3_05_M02892 TRANSFAC + 18477017 18477039 6.0E-06 CTTACCGCCTGGTTACAGAAGAG 23 V_PR_02_M00957 TRANSFAC - 18479853 18479879 5.0E-06 ATTTATAGGTTTTGGTGTTCTCATGGT 27 V_SP1_Q2_01_M00933 TRANSFAC - 18477441 18477450 4.0E-06 CCCCGCCCCC 10 V_ARP1_01_M00155 TRANSFAC + 18476912 18476927 9.0E-06 TCCAGCCCTGACCTTT 16 V_HOXA10_01_M01464 TRANSFAC + 18477043 18477058 2.0E-06 TAAAAAATAAAAATCA 16 V_SP1_Q4_01_M00932 TRANSFAC + 18477440 18477452 1.0E-06 GGGGGGCGGGGCT 13 V_HNF1A_01_M02162 TRANSFAC + 18477040 18477053 4.0E-06 GGTTAAAAAATAAA 14 V_IRXB3_01_M01377 TRANSFAC + 18477386 18477402 0.0E+00 AGTGAACATGTAAAATT 17 V_PBX1_04_M01357 TRANSFAC + 18477996 18478012 6.0E-06 GCTTCCATCAATTGTAA 17 V_SMAD1_01_M01590 TRANSFAC + 18477979 18477990 8.0E-06 AAGAACAAAGCC 12 V_NF1_Q6_M00193 TRANSFAC + 18473663 18473680 2.0E-06 ATTTGGCAAGATTCCCTG 18 V_OCT4_01_M01125 TRANSFAC + 18478005 18478019 6.0E-06 AATTGTAAAGCAAAG 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.