Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

GNB5


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
10681 guanine nucleotide binding protein (G protein), beta 5 chr15 -52483065 - 52488565 52483565

Transcription Factor Binding Sites

 
Download all TFBS in the GNB5 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
TBX20_TBX_full_monomeric_11_1 SELEX + 52483583 52483593 1.0E-06 GAGGTGTGAAG 11
PITX3_homeodomain_DBD_monomeric_9_1 SELEX - 52479222 52479230 1.0E-05 TTTAATCCC 9
TBX1_TBX_DBD_dimeric_20_2 SELEX - 52483573 52483592 1.0E-06 TTCACACCTCAAGCTGCGCG 20
TBR1_TBX_DBD_monomeric_10_1 SELEX + 52483584 52483593 5.0E-06 AGGTGTGAAG 10
EWSR1-FLI1_MA0149.1 JASPAR + 52479571 52479588 7.0E-06 GAAGGGACGGCAGGAAAA 18
EWSR1-FLI1_MA0149.1 JASPAR - 52483638 52483655 0.0E+00 GGAAGGAAGCAAGCTGAG 18
EWSR1-FLI1_MA0149.1 JASPAR - 52483642 52483659 1.0E-06 TGGAGGAAGGAAGCAAGC 18
Esrrb_MA0141.1 JASPAR + 52479233 52479244 0.0E+00 AGTTCAAGGTCA 12
PITX1_homeodomain_full_monomeric_8_1 SELEX - 52479222 52479229 1.0E-05 TTAATCCC 8
OTX2_homeodomain_DBD_dimeric_15_1 SELEX - 52479461 52479475 8.0E-06 CCTAATGCTATTACT 15
EOMES_TBX_DBD_monomeric_13_1 SELEX + 52483583 52483595 8.0E-06 GAGGTGTGAAGCA 13
TBR1_TBX_full_monomeric_11_1 SELEX + 52483583 52483593 5.0E-06 GAGGTGTGAAG 11
Otx1_homeodomain_DBD_dimeric_15_1 SELEX - 52479461 52479475 7.0E-06 CCTAATGCTATTACT 15
ESRRG_nuclearreceptor_full_monomeric_10_1 SELEX + 52479236 52479245 1.0E-05 TCAAGGTCAG 10
Gata1_MA0035.2 JASPAR - 52483615 52483625 7.0E-06 GAAGATAAGGA 11
TBX21_TBX_full_monomeric_10_1 SELEX + 52483583 52483592 3.0E-06 GAGGTGTGAA 10
TBX2_TBX_full_monomeric_11_1 SELEX + 52483583 52483593 6.0E-06 GAGGTGTGAAG 11
RHOXF1_homeodomain_full_monomeric_8_1 SELEX - 52479222 52479229 1.0E-05 TTAATCCC 8
PITX1_homeodomain_full_monomeric_9_1 SELEX - 52479222 52479230 4.0E-06 TTTAATCCC 9
Esrra_nuclearreceptor_DBD_monomeric_11_1 SELEX + 52479235 52479245 3.0E-06 TTCAAGGTCAG 11
TFAP4_bHLH_full_dimeric_10_1 SELEX - 52486214 52486223 7.0E-06 CACAGCTGAT 10
RORA_1_MA0071.1 JASPAR + 52479235 52479244 3.0E-06 TTCAAGGTCA 10
RORA_2_MA0072.1 JASPAR + 52479546 52479559 2.0E-06 CAGAAGTAGGTCAG 14
V_CDP_03_M01342 TRANSFAC + 52483604 52483620 9.0E-06 ACTGGCTAATCTCCTTA 17
V_FXR_Q3_M00631 TRANSFAC + 52479218 52479231 1.0E-06 CAGGGGGATTAAAC 14
V_OBOX5_05_M03066 TRANSFAC + 52479218 52479234 5.0E-06 CAGGGGGATTAAACAAG 17
V_GATA1_Q6_M02004 TRANSFAC - 52483614 52483628 9.0E-06 AGAGAAGATAAGGAG 15
V_OBOX1_01_M01450 TRANSFAC + 52479217 52479233 1.0E-06 GCAGGGGGATTAAACAA 17
V_OBOX1_01_M01450 TRANSFAC - 52483605 52483621 9.0E-06 ATAAGGAGATTAGCCAG 17
V_BCL6_01_M01183 TRANSFAC - 52479585 52479600 9.0E-06 TAACCTAGTTTGTTTT 16
V_ERR3_Q2_01_M02094 TRANSFAC + 52479234 52479246 3.0E-06 GTTCAAGGTCAGC 13
V_LRH1_Q5_01_M02098 TRANSFAC + 52479234 52479244 0.0E+00 GTTCAAGGTCA 11
V_FOXO4_02_M00476 TRANSFAC - 52479581 52479594 3.0E-06 AGTTTGTTTTCCTG 14
V_EOMES_03_M02747 TRANSFAC + 52483580 52483596 9.0E-06 CTTGAGGTGTGAAGCAC 17
V_TBR2_01_M01774 TRANSFAC + 52483584 52483592 3.0E-06 AGGTGTGAA 9
V_CUX1_03_M02958 TRANSFAC + 52483604 52483620 9.0E-06 ACTGGCTAATCTCCTTA 17
V_STAT6_01_M00494 TRANSFAC + 52479293 52479300 7.0E-06 TATTTCCA 8
V_AR_03_M00956 TRANSFAC + 52479597 52479623 6.0E-06 GTTAAGAGATTGCTATGTTCTGGAGAA 27
V_BARBIE_01_M00238 TRANSFAC + 52479210 52479224 8.0E-06 AGGAAAAGCAGGGGG 15
V_OBOX5_02_M01480 TRANSFAC + 52479218 52479234 5.0E-06 CAGGGGGATTAAACAAG 17
V_TBX5_02_M01020 TRANSFAC + 52483582 52483591 8.0E-06 TGAGGTGTGA 10
V_OBOX2_01_M01364 TRANSFAC + 52479217 52479233 2.0E-06 GCAGGGGGATTAAACAA 17
V_ELF5_01_M01197 TRANSFAC + 52486174 52486184 6.0E-06 AAAAGGAAATG 11
V_PAX6_Q2_M00979 TRANSFAC - 52479232 52479245 0.0E+00 CTGACCTTGAACTT 14
V_GR_01_M00955 TRANSFAC + 52479597 52479623 3.0E-06 GTTAAGAGATTGCTATGTTCTGGAGAA 27
V_DAX1_01_M01248 TRANSFAC + 52479231 52479250 0.0E+00 CAAGTTCAAGGTCAGCGGCA 20
V_GATA1_09_M02254 TRANSFAC - 52483615 52483625 7.0E-06 GAAGATAAGGA 11
V_FOXO1_Q5_M01216 TRANSFAC + 52479584 52479592 5.0E-06 GAAAACAAA 9
V_SF1_Q6_01_M01132 TRANSFAC - 52479236 52479244 3.0E-06 TGACCTTGA 9
V_GCNF_01_M00526 TRANSFAC + 52479229 52479246 0.0E+00 AACAAGTTCAAGGTCAGC 18
V_LRH1_Q5_M01142 TRANSFAC - 52479234 52479245 0.0E+00 CTGACCTTGAAC 12
V_OBOX2_02_M03064 TRANSFAC + 52479217 52479233 2.0E-06 GCAGGGGGATTAAACAA 17
V_TAL1_01_M01591 TRANSFAC + 52483613 52483625 5.0E-06 TCTCCTTATCTTC 13
V_OSR2_04_M02889 TRANSFAC - 52479259 52479274 1.0E-06 TCATGCTACTTACAGA 16
V_GATA1_04_M00128 TRANSFAC - 52483614 52483626 3.0E-06 AGAAGATAAGGAG 13
V_ERR1_Q2_M00511 TRANSFAC + 52479233 52479246 5.0E-06 AGTTCAAGGTCAGC 14
V_PITX1_01_M01484 TRANSFAC + 52479217 52479233 3.0E-06 GCAGGGGGATTAAACAA 17
V_PARP_Q3_M01211 TRANSFAC - 52479292 52479301 2.0E-06 TTGGAAATAG 10
V_ERR2_01_M01589 TRANSFAC + 52479236 52479247 1.0E-06 TCAAGGTCAGCG 12
V_OSR1_04_M02888 TRANSFAC - 52479259 52479274 3.0E-06 TCATGCTACTTACAGA 16
V_EWSR1FLI1_01_M02252 TRANSFAC + 52479571 52479588 7.0E-06 GAAGGGACGGCAGGAAAA 18
V_EWSR1FLI1_01_M02252 TRANSFAC - 52483638 52483655 0.0E+00 GGAAGGAAGCAAGCTGAG 18
V_EWSR1FLI1_01_M02252 TRANSFAC - 52483642 52483659 1.0E-06 TGGAGGAAGGAAGCAAGC 18
V_PR_02_M00957 TRANSFAC + 52479597 52479623 4.0E-06 GTTAAGAGATTGCTATGTTCTGGAGAA 27
V_OBOX5_01_M01381 TRANSFAC + 52479218 52479234 3.0E-06 CAGGGGGATTAAACAAG 17
V_OBOX3_02_M03065 TRANSFAC + 52479217 52479233 3.0E-06 GCAGGGGGATTAAACAA 17
V_BHLHB2_04_M02845 TRANSFAC - 52479508 52479530 3.0E-06 GAATAATCCACGTGGATGACACT 23
V_EVI1_03_M00080 TRANSFAC - 52483618 52483628 4.0E-06 AGAGAAGATAA 11
V_OBOX6_06_M03067 TRANSFAC - 52479218 52479234 3.0E-06 CTTGTTTAATCCCCCTG 17
V_OBOX3_01_M01466 TRANSFAC + 52479217 52479233 3.0E-06 GCAGGGGGATTAAACAA 17
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL