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RRAGA Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 10670 Ras-related GTP binding A chr9 + 19044371 - 19049871 19049371 Transcription Factor Binding Sites   Download all TFBS in the RRAGA promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints POU4F2_POU_full_monomeric_16_1 SELEX - 19048821 19048836 5.0E-06 TAGAATTTATAATTAG 16 CTCF_MA0139.1 JASPAR + 19049162 19049180 0.0E+00 TGGCCACGAGAGGGCAGCA 19 Foxa2_MA0047.2 JASPAR + 19050764 19050775 2.0E-06 TATTTACTCAGC 12 GABPA_MA0062.2 JASPAR + 19049374 19049384 3.0E-06 CCGGAAGTGGG 11 VSX2_homeodomain_DBD_monomeric_8_1 SELEX + 19048821 19048828 5.0E-06 CTAATTAT 8 ALX3_homeodomain_full_monomeric_10_1 SELEX + 19048820 19048829 2.0E-06 TCTAATTATA 10 ZNF713_C2H2_full_monomeric_17_1 SELEX - 19050841 19050857 8.0E-06 ATGAGAACACACACGAA 17 FOXA1_MA0148.1 JASPAR + 19050764 19050774 7.0E-06 TATTTACTCAG 11 SOX2_HMG_full_dimeric_17_1 SELEX + 19049741 19049757 2.0E-06 CGCCAATTACATTGCTC 17 NHLH1_MA0048.1 JASPAR - 19049535 19049546 8.0E-06 GCGCAGCTGGGC 12 MEF2D_MADS_DBD_dimeric_12_1 SELEX + 19048820 19048831 8.0E-06 TCTAATTATAAA 12 En1_MA0027.1 JASPAR - 19049868 19049878 2.0E-06 AAGTAATTTTC 11 Alx1_homeodomain_DBD_monomeric_10_1 SELEX + 19048820 19048829 3.0E-06 TCTAATTATA 10 ERG_ETS_full_dimeric_14_1 SELEX + 19054239 19054252 1.0E-06 AGAGGAAATCCGTT 14 MEF2A_MADS_DBD_dimeric_12_1 SELEX + 19048820 19048831 5.0E-06 TCTAATTATAAA 12 MEF2A_MADS_DBD_dimeric_12_1 SELEX - 19048820 19048831 5.0E-06 TTTATAATTAGA 12 RARA_nuclearreceptor_DBD_dimeric_18_2 SELEX - 19050443 19050460 7.0E-06 GAGGTGAAGATGTCGATG 18 Pax4_MA0068.1 JASPAR - 19049133 19049162 8.0E-06 AAAAAAAGCCCCAACCGCCACCACCACCGC 30 Pax4_MA0068.1 JASPAR - 19049134 19049163 6.0E-06 CAAAAAAAGCCCCAACCGCCACCACCACCG 30 RFX2_RFX_DBD_dimeric_15_1 SELEX + 19049809 19049823 4.0E-06 GATTCCTAGGGAACC 15 Lhx8_homeodomain_DBD_dimeric_18_1 SELEX + 19049733 19049750 8.0E-06 ATAATCTTCGCCAATTAC 18 NFAT5_NFAT_DBD_dimeric_14_1 SELEX + 19049865 19049878 0.0E+00 ATGGAAAATTACTT 14 SOX14_HMG_DBD_dimeric_13_1 SELEX + 19049743 19049755 5.0E-06 CCAATTACATTGC 13 SOX15_HMG_full_dimeric_15_1 SELEX + 19049742 19049756 8.0E-06 GCCAATTACATTGCT 15 SOX14_HMG_DBD_dimeric_12_1 SELEX + 19049743 19049754 2.0E-06 CCAATTACATTG 12 Myf_MA0055.1 JASPAR + 19050210 19050221 4.0E-06 CAGCAGCTGGAG 12 HLF_MA0043.1 JASPAR - 19050816 19050827 7.0E-06 TGTTACACCATA 12 GABPA_ETS_full_monomeric_10_1 SELEX + 19049373 19049382 9.0E-06 GCCGGAAGTG 10 SRY_HMG_DBD_dimeric_13_1 SELEX + 19049743 19049755 3.0E-06 CCAATTACATTGC 13 HSFY2_HSF_DBD_dimeric_9_1 SELEX + 19050135 19050143 3.0E-06 TTTCGAACG 9 Sox1_HMG_DBD_dimeric_15_1 SELEX + 19049742 19049756 1.0E-06 GCCAATTACATTGCT 15 FLI1_ETS_full_monomeric_14_1 SELEX + 19054239 19054252 2.0E-06 AGAGGAAATCCGTT 14 NFIA_NFI_full_monomeric_10_1 SELEX + 19050602 19050611 2.0E-06 ATTGCCAAAT 10 IRF2_MA0051.1 JASPAR - 19048958 19048975 7.0E-06 GGAAAGTGAGACTTGTAG 18 V_NFAT_Q4_01_M00935 TRANSFAC + 19049865 19049874 1.0E-06 ATGGAAAATT 10 V_MEQ_01_M02049 TRANSFAC - 19050844 19050852 7.0E-06 AACACACAC 9 V_STAT5A_Q6_M01890 TRANSFAC + 19050798 19050810 3.0E-06 ACCTTTCTGAGAA 13 V_STAT5A_Q6_M01890 TRANSFAC - 19050802 19050814 5.0E-06 CAACTTCTCAGAA 13 V_STAT3_01_M00225 TRANSFAC + 19050527 19050547 8.0E-06 TCGCAATGCCCGGAAACACTT 21 V_DBX1_01_M01483 TRANSFAC - 19048822 19048838 4.0E-06 TTTAGAATTTATAATTA 17 V_TCF3_01_M01594 TRANSFAC - 19049232 19049244 3.0E-06 CTTTTGTTCTGTT 13 V_HSF1_Q6_M01023 TRANSFAC - 19047938 19047954 0.0E+00 CTTCTGGAGCCTTCTTA 17 V_GATA1_Q6_M02004 TRANSFAC + 19047930 19047944 4.0E-06 CGATCAGATAAGAAG 15 V_ETS_B_M00340 TRANSFAC + 19054238 19054251 3.0E-06 TAGAGGAAATCCGT 14 V_STAT_Q6_M00777 TRANSFAC + 19050797 19050809 8.0E-06 GACCTTTCTGAGA 13 V_GABP_B_M00341 TRANSFAC + 19049373 19049384 4.0E-06 GCCGGAAGTGGG 12 V_MEF2_02_M00231 TRANSFAC + 19048814 19048835 7.0E-06 TGGAATTCTAATTATAAATTCT 22 V_MEF2_02_M00231 TRANSFAC - 19048816 19048837 1.0E-06 TTAGAATTTATAATTAGAATTC 22 V_NFAT3_Q3_M01734 TRANSFAC - 19049866 19049875 7.0E-06 TAATTTTCCA 10 V_RFX4_03_M02789 TRANSFAC + 19049205 19049219 1.0E-05 ACCCCTAGCAACAGC 15 V_EAR2_Q2_M01728 TRANSFAC - 19050309 19050322 5.0E-06 TGCTCTTTGCACTG 14 V_AP2_Q6_01_M00915 TRANSFAC + 19049621 19049633 9.0E-06 GCGCCCTCAGGCC 13 V_MAF_Q6_M00648 TRANSFAC - 19050391 19050406 5.0E-06 TGGAAGGAAGCGGCCA 16 V_SOX21_03_M02803 TRANSFAC + 19048820 19048835 5.0E-06 TCTAATTATAAATTCT 16 V_SOX21_03_M02803 TRANSFAC - 19048820 19048835 8.0E-06 AGAATTTATAATTAGA 16 V_NFAT2_01_M01748 TRANSFAC + 19049865 19049873 2.0E-06 ATGGAAAAT 9 V_LDSPOLYA_B_M00317 TRANSFAC + 19050843 19050858 0.0E+00 CGTGTGTGTTCTCATT 16 V_PAX7_01_M01339 TRANSFAC + 19048817 19048833 7.0E-06 AATTCTAATTATAAATT 17 V_ELF4_04_M02850 TRANSFAC + 19048818 19048834 6.0E-06 ATTCTAATTATAAATTC 17 V_TAL1_Q6_M00993 TRANSFAC + 19048990 19048999 8.0E-06 TCCATCTGCC 10 V_TAL1_Q6_M00993 TRANSFAC - 19050211 19050220 3.0E-06 TCCAGCTGCT 10 V_ETV7_01_M02071 TRANSFAC + 19050535 19050544 3.0E-06 CCCGGAAACA 10 V_HELIOSA_02_M01004 TRANSFAC + 19049863 19049873 9.0E-06 TCATGGAAAAT 11 V_MYF_01_M01302 TRANSFAC + 19050210 19050221 4.0E-06 CAGCAGCTGGAG 12 V_LMX1_01_M01409 TRANSFAC + 19048817 19048833 4.0E-06 AATTCTAATTATAAATT 17 V_OCT1_03_M00137 TRANSFAC - 19048819 19048831 2.0E-06 TTTATAATTAGAA 13 V_GFI1_01_M00250 TRANSFAC - 19049909 19049932 9.0E-06 AACACGTAAATCAAAACTTCCACG 24 V_CEBPD_Q6_M00621 TRANSFAC + 19049871 19049882 8.0E-06 AATTACTTCACC 12 V_RSRFC4_Q2_M00407 TRANSFAC - 19048817 19048833 4.0E-06 AATTTATAATTAGAATT 17 V_RSRFC4_Q2_M00407 TRANSFAC + 19048818 19048834 0.0E+00 ATTCTAATTATAAATTC 17 V_ER81_02_M02065 TRANSFAC + 19049373 19049382 1.0E-05 GCCGGAAGTG 10 V_MEF2_03_M00232 TRANSFAC + 19048814 19048835 4.0E-06 TGGAATTCTAATTATAAATTCT 22 V_MEF2_03_M00232 TRANSFAC - 19048816 19048837 4.0E-06 TTAGAATTTATAATTAGAATTC 22 V_RFXDC2_03_M02790 TRANSFAC + 19049205 19049219 9.0E-06 ACCCCTAGCAACAGC 15 V_ASCL2_03_M02737 TRANSFAC + 19050208 19050224 9.0E-06 TTCAGCAGCTGGAGATG 17 V_ISRE_01_M00258 TRANSFAC + 19048962 19048976 9.0E-06 AAGTCTCACTTTCCG 15 V_GADP_01_M01258 TRANSFAC - 19049371 19049382 2.0E-06 CACTTCCGGCGG 12 V_IRF3_06_M02871 TRANSFAC + 19049677 19049690 6.0E-06 AGAAAAAGGTGCTG 14 V_OCT1_04_M00138 TRANSFAC + 19048810 19048832 7.0E-06 GCTTTGGAATTCTAATTATAAAT 23 V_OCT1_08_M01354 TRANSFAC - 19048818 19048833 8.0E-06 AATTTATAATTAGAAT 16 V_DAX1_01_M01248 TRANSFAC - 19050790 19050809 6.0E-06 TCTCAGAAAGGTCAGCTTCA 20 V_MEF2_Q6_01_M00941 TRANSFAC + 19049153 19049164 1.0E-05 GGCTTTTTTTGG 12 V_MAFK_Q3_M02022 TRANSFAC + 19050767 19050777 8.0E-06 TTACTCAGCTA 11 V_STAT4_Q5_M02117 TRANSFAC - 19050801 19050810 9.0E-06 TTCTCAGAAA 10 V_ARID3A_04_M02735 TRANSFAC - 19048816 19048832 5.0E-06 ATTTATAATTAGAATTC 17 V_ARID3A_04_M02735 TRANSFAC + 19048817 19048833 7.0E-06 AATTCTAATTATAAATT 17 V_TBP_06_M02814 TRANSFAC - 19048822 19048837 4.0E-06 TTAGAATTTATAATTA 16 V_CTCF_02_M01259 TRANSFAC + 19049159 19049178 0.0E+00 TTTTGGCCACGAGAGGGCAG 20 V_OCT4_02_M01124 TRANSFAC + 19048818 19048832 8.0E-06 ATTCTAATTATAAAT 15 V_SOX11_03_M02795 TRANSFAC + 19049232 19049248 6.0E-06 AACAGAACAAAAGACCG 17 V_CTCF_01_M01200 TRANSFAC + 19049161 19049180 0.0E+00 TTGGCCACGAGAGGGCAGCA 20 V_GLI3_Q5_01_M01657 TRANSFAC + 19049380 19049388 6.0E-06 GTGGGTGGT 9 V_LIM1_01_M01418 TRANSFAC + 19048817 19048833 4.0E-06 AATTCTAATTATAAATT 17 V_NEUROD_02_M01288 TRANSFAC - 19049222 19049233 6.0E-06 TTGCAGCTGGGT 12 V_OTX2_Q3_M01719 TRANSFAC + 19048868 19048880 7.0E-06 AAAGGAATTAAAA 13 V_ELF1_Q6_M00746 TRANSFAC + 19054236 19054247 1.0E-06 AGTAGAGGAAAT 12 V_TBP_01_M00471 TRANSFAC + 19048826 19048833 8.0E-06 TATAAATT 8 V_POU6F1_02_M01462 TRANSFAC - 19048816 19048832 4.0E-06 ATTTATAATTAGAATTC 17 V_GATA1_04_M00128 TRANSFAC + 19047932 19047944 0.0E+00 ATCAGATAAGAAG 13 V_CNOT3_01_M01253 TRANSFAC + 19049617 19049626 8.0E-06 GGCCGCGCCC 10 V_TCF7_04_M02921 TRANSFAC + 19048820 19048834 7.0E-06 TCTAATTATAAATTC 15 V_LMX1B_01_M01363 TRANSFAC + 19048816 19048832 8.0E-06 GAATTCTAATTATAAAT 17 V_LMX1B_01_M01363 TRANSFAC - 19048817 19048833 4.0E-06 AATTTATAATTAGAATT 17 V_FOXO3_01_M00477 TRANSFAC + 19050128 19050141 4.0E-06 TGCTTGTTTTCGAA 14 V_FOXA2_03_M02260 TRANSFAC + 19050764 19050775 2.0E-06 TATTTACTCAGC 12 V_STAT6_02_M00500 TRANSFAC - 19054241 19054248 1.0E-05 GATTTCCT 8 V_RSRFC4_01_M00026 TRANSFAC + 19048818 19048833 0.0E+00 ATTCTAATTATAAATT 16 V_RSRFC4_01_M00026 TRANSFAC - 19048818 19048833 1.0E-06 AATTTATAATTAGAAT 16 V_ZABC1_01_M01306 TRANSFAC + 19050424 19050431 1.0E-05 ATTCCAAC 8 V_OCT1_07_M00248 TRANSFAC + 19048815 19048826 8.0E-06 GGAATTCTAATT 12 V_DMRT2_01_M01147 TRANSFAC + 19050276 19050291 2.0E-06 GAAAGAGCTACATTCT 16 V_NUR77_Q5_M01217 TRANSFAC + 19050795 19050804 7.0E-06 CTGACCTTTC 10 V_RFX3_04_M02788 TRANSFAC + 19049201 19049223 2.0E-06 ACGTACCCCTAGCAACAGCAAAC 23 V_BSX_01_M01442 TRANSFAC - 19049738 19049753 6.0E-06 AATGTAATTGGCGAAG 16 V_EHF_07_M02849 TRANSFAC - 19050415 19050430 0.0E+00 TTGGAATTCCTAACTT 16 V_BRCA_01_M01082 TRANSFAC - 19049231 19049238 1.0E-05 TTCTGTTG 8 V_PAX4_04_M00380 TRANSFAC - 19049133 19049162 0.0E+00 AAAAAAAGCCCCAACCGCCACCACCACCGC 30 V_SMAD1_01_M01590 TRANSFAC + 19049234 19049245 1.0E-06 CAGAACAAAAGA 12 V_HOXA4_Q2_M00640 TRANSFAC - 19048821 19048828 5.0E-06 ATAATTAG 8 V_SOX14_03_M02798 TRANSFAC + 19048820 19048835 6.0E-06 TCTAATTATAAATTCT 16 V_SOX14_03_M02798 TRANSFAC - 19048820 19048835 6.0E-06 AGAATTTATAATTAGA 16 V_NANOG_02_M01247 TRANSFAC + 19049230 19049249 3.0E-06 GCAACAGAACAAAAGACCGA 20

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