Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

CENPA


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
1058 centromere protein A chr2 +27003881 - 27009382 27008882

Transcription Factor Binding Sites

 
Download all TFBS in the CENPA promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
POU4F2_POU_full_monomeric_16_1 SELEX + 27009593 27009608 6.0E-06 GTGCATTTTTAAATTG 16
CTCF_MA0139.1 JASPAR + 27008670 27008688 8.0E-06 TGGCAAGCAGGGGGCAGGA 19
HSF2_HSF_DBD_trimeric_13_1 SELEX - 27008550 27008562 3.0E-06 TTCTAGAAAAGTC 13
Foxk1_forkhead_DBD_putatively-multimeric_11_1 SELEX - 27009753 27009763 4.0E-06 CGGACACAAGC 11
Pax4_MA0068.1 JASPAR - 27009655 27009684 1.0E-06 GAAAAAAAACCCCTGAAAGACACCTCCTAA 30
FOXK1_forkhead_DBD_putatively-multimeric_10_1 SELEX - 27009754 27009763 3.0E-06 CGGACACAAG 10
POU4F3_POU_DBD_monomeric_16_1 SELEX + 27009593 27009608 8.0E-06 GTGCATTTTTAAATTG 16
HSF4_HSF_DBD_trimeric_13_1 SELEX - 27008550 27008562 6.0E-06 TTCTAGAAAAGTC 13
NR4A2_nuclearreceptor_full_dimeric_16_1 SELEX + 27008491 27008506 9.0E-06 TCATCTTTAAAAGCCA 16
NR4A2_nuclearreceptor_full_dimeric_16_1 SELEX - 27008491 27008506 5.0E-06 TGGCTTTTAAAGATGA 16
FOXG1_forkhead_DBD_putatively-multimeric_12_1 SELEX - 27009480 27009491 7.0E-06 ATGGGCACAATA 12
SP4_C2H2_full_monomeric_17_1 SELEX - 27008886 27008902 1.0E-05 CTCGCTCCGCCCACTTC 17
POU1F1_POU_DBD_monomeric_17_1 SELEX + 27009590 27009606 6.0E-06 TTTGTGCATTTTTAAAT 17
RFX5_RFX_DBD_dimeric_16_3 SELEX + 27008513 27008528 9.0E-06 CGTTGCTAAGGCAAAG 16
RFX5_RFX_DBD_dimeric_16_3 SELEX - 27008513 27008528 2.0E-06 CTTTGCCTTAGCAACG 16
POU4F1_POU_DBD_monomeric_14_1 SELEX + 27009593 27009606 7.0E-06 GTGCATTTTTAAAT 14
V_FOXP1_01_M00987 TRANSFAC + 27008768 27008787 3.0E-06 ATATTTGTGTCTCGGTGCAT 20
V_STAT5A_Q6_M01890 TRANSFAC + 27008551 27008563 8.0E-06 ACTTTTCTAGAAA 13
V_IPF1_02_M01234 TRANSFAC + 27009497 27009506 2.0E-06 AGCTAATGAG 10
V_BCL6_Q3_01_M02085 TRANSFAC + 27008553 27008562 2.0E-06 TTTTCTAGAA 10
V_BCL6_Q3_01_M02085 TRANSFAC - 27008555 27008564 0.0E+00 CTTTCTAGAA 10
V_BCL6B_03_M02740 TRANSFAC - 27008550 27008565 4.0E-06 GCTTTCTAGAAAAGTC 16
V_MMEF2_Q6_M00405 TRANSFAC + 27008864 27008879 6.0E-06 GGTTTTAAAAAACGCC 16
V_RFX4_03_M02789 TRANSFAC - 27008511 27008525 2.0E-06 TGCCTTAGCAACGCA 15
V_TCFAP2E_04_M02926 TRANSFAC - 27009676 27009689 2.0E-06 GAAGGGAAAAAAAA 14
V_BCL6_02_M01185 TRANSFAC - 27008553 27008566 6.0E-06 TGCTTTCTAGAAAA 14
V_CEBPE_Q6_M01868 TRANSFAC + 27009601 27009614 3.0E-06 TTAAATTGCAAAAG 14
V_HIC1_06_M02867 TRANSFAC + 27009480 27009495 8.0E-06 TATTGTGCCCATTTTA 16
V_SOX7_04_M02911 TRANSFAC + 27009785 27009806 0.0E+00 GTCTTAATTGTCTATGGTGGGC 22
V_IRF3_Q3_M01279 TRANSFAC + 27009677 27009689 3.0E-06 TTTTTTTCCCTTC 13
V_TATA_C_M00216 TRANSFAC + 27008494 27008503 3.0E-06 TCTTTAAAAG 10
V_RFXDC2_03_M02790 TRANSFAC - 27008511 27008525 3.0E-06 TGCCTTAGCAACGCA 15
V_OCT1_04_M00138 TRANSFAC + 27009598 27009620 7.0E-06 TTTTTAAATTGCAAAAGTATTGA 23
V_POU6F1_01_M00465 TRANSFAC + 27008385 27008395 5.0E-06 GCAAAGTTTAT 11
V_CTCF_02_M01259 TRANSFAC + 27008667 27008686 7.0E-06 GATTGGCAAGCAGGGGGCAG 20
V_CTCF_01_M01200 TRANSFAC + 27008669 27008688 4.0E-06 TTGGCAAGCAGGGGGCAGGA 20
V_HOXD9_Q2_M01834 TRANSFAC + 27008526 27008535 4.0E-06 AAGCATAAAA 10
V_BCL6B_04_M02844 TRANSFAC + 27008692 27008707 4.0E-06 TTTCCCGCCCCATCTC 16
V_HBP1_04_M02866 TRANSFAC + 27009483 27009499 3.0E-06 TGTGCCCATTTTACAGC 17
V_ALPHACP1_01_M00687 TRANSFAC + 27009496 27009506 1.0E-05 CAGCTAATGAG 11
V_NFYC_Q5_M02107 TRANSFAC - 27008788 27008801 7.0E-06 GGGCCAATGAGAGT 14
V_TAL1_01_M01591 TRANSFAC + 27008486 27008498 7.0E-06 TTTCCTCATCTTT 13
V_BARHL1_01_M01332 TRANSFAC - 27009785 27009800 3.0E-06 CATAGACAATTAAGAC 16
V_HDX_01_M01333 TRANSFAC - 27008720 27008736 2.0E-06 ATGGTAAAATCAACCAA 17
V_HIF2A_01_M01249 TRANSFAC - 27008562 27008571 6.0E-06 GAACGTGCTT 10
V_HSF2_02_M01244 TRANSFAC + 27008550 27008562 4.0E-06 GACTTTTCTAGAA 13
V_RFX3_04_M02788 TRANSFAC - 27008507 27008529 5.0E-06 GCTTTGCCTTAGCAACGCAGAGA 23
V_BARHL2_01_M01446 TRANSFAC - 27009785 27009800 3.0E-06 CATAGACAATTAAGAC 16
V_TFE_Q6_M01029 TRANSFAC + 27008945 27008952 1.0E-05 TCATGTGA 8
V_CMAF_01_M01070 TRANSFAC - 27008374 27008392 4.0E-06 AACTTTGCTGACGCTTGGG 19
V_NFYA_Q5_M02106 TRANSFAC - 27008788 27008801 6.0E-06 GGGCCAATGAGAGT 14
V_SP1_Q4_01_M00932 TRANSFAC + 27008888 27008900 9.0E-06 AGTGGGCGGAGCG 13
V_TCF3_05_M02920 TRANSFAC - 27009674 27009688 6.0E-06 AAGGGAAAAAAAACC 15
V_PAX4_04_M00380 TRANSFAC - 27009654 27009683 3.0E-06 AAAAAAAACCCCTGAAAGACACCTCCTAAG 30
V_OCT4_01_M01125 TRANSFAC + 27009599 27009613 3.0E-06 TTTTAAATTGCAAAA 15
V_HSF1_Q6_01_M02017 TRANSFAC + 27008550 27008563 2.0E-06 GACTTTTCTAGAAA 14
V_HSF1_Q6_01_M02017 TRANSFAC - 27008554 27008567 2.0E-06 GTGCTTTCTAGAAA 14
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL