Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

IPO7 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 10527 importin 7 chr11 + 9401168 - 9406668 9406168 Transcription Factor Binding Sites   Download all TFBS in the IPO7 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR + 9406733 9406751 7.0E-06 CGTCCAGGAGGGGGCGAAA 19 MSX2_homeodomain_DBD_dimeric_18_1 SELEX + 9405877 9405894 9.0E-06 TCAATCACGCAGCCATTA 18 POU2F1_POU_DBD_dimeric_14_1 SELEX - 9405818 9405831 7.0E-06 CTAAAATATTTAAA 14 IRF7_IRF_DBD_dimeric_14_1 SELEX - 9406008 9406021 3.0E-06 TCAAAAACGAAAAA 14 SPIC_ETS_full_monomeric_14_1 SELEX + 9408642 9408655 0.0E+00 AGAATGAGGAAGTA 14 POU3F3_POU_DBD_monomeric_12_1 SELEX + 9405819 9405830 4.0E-06 TTAAATATTTTA 12 POU3F2_POU_DBD_monomeric_13_1 SELEX + 9405818 9405830 4.0E-06 TTTAAATATTTTA 13 YY1_C2H2_full_monomeric_11_1 SELEX + 9406320 9406330 8.0E-06 AACACCATTAT 11 TBX19_TBX_DBD_dimeric_20_1 SELEX + 9407185 9407204 9.0E-06 TGTGACAGACAGGTGAGATA 20 Esrrb_MA0141.1 JASPAR - 9407113 9407124 3.0E-06 GGCCCAAGGTCA 12 RARA_nuclearreceptor_DBD_dimeric_18_2 SELEX - 9407129 9407146 8.0E-06 AGGATCAAGAGGTTAAGC 18 HOMEZ_HOMEZ_DBD_monomer-or-dimer_12_1 SELEX - 9406007 9406018 5.0E-06 AAAACGAAAAAT 12 SPIB_ETS_DBD_monomeric_14_1 SELEX + 9408642 9408655 0.0E+00 AGAATGAGGAAGTA 14 Klf4_MA0039.2 JASPAR + 9406508 9406517 1.0E-05 AGGGTGGGGC 10 IRF1_MA0050.1 JASPAR - 9408574 9408585 5.0E-06 GAAAGTCAAAGC 12 RFX2_RFX_DBD_dimeric_15_1 SELEX + 9406921 9406935 1.0E-06 AGTTGCTAGGGAAGG 15 POU2F3_POU_DBD_dimeric_12_1 SELEX - 9405819 9405830 7.0E-06 TAAAATATTTAA 12 NFATC1_NFAT_full_dimeric_20_1 SELEX - 9402617 9402636 6.0E-06 AGTGAAAAATATGGTTTTAA 20 NR2F1_nuclearreceptor_DBD_dimeric_16_1 SELEX - 9407131 9407146 2.0E-06 AGGATCAAGAGGTTAA 16 Gata1_MA0035.2 JASPAR - 9407239 9407249 5.0E-06 ACTGATAAGGA 11 Mycn_MA0104.2 JASPAR - 9406059 9406068 8.0E-06 CCCACGTGGC 10 Msx3_homeodomain_DBD_dimeric_18_1 SELEX + 9405877 9405894 7.0E-06 TCAATCACGCAGCCATTA 18 POU3F1_POU_DBD_monomeric_12_2 SELEX + 9405819 9405830 3.0E-06 TTAAATATTTTA 12 ESRRB_nuclearreceptor_DBD_monomeric_11_1 SELEX - 9407111 9407121 7.0E-06 CCAAGGTCACT 11 SPI1_ETS_full_monomeric_14_1 SELEX + 9408642 9408655 0.0E+00 AGAATGAGGAAGTA 14 IRF3_IRF_full_trimeric_21_1 SELEX - 9405975 9405995 2.0E-06 ACAAAAAGAAAAGCAAAACAA 21 Nr2f6_nuclearreceptor_DBD_dimeric_15_1 SELEX - 9407132 9407146 2.0E-06 AGGATCAAGAGGTTA 15 POU3F3_POU_DBD_dimeric_12_1 SELEX - 9405819 9405830 7.0E-06 TAAAATATTTAA 12 MSX1_homeodomain_DBD_dimeric_18_1 SELEX + 9405877 9405894 1.0E-05 TCAATCACGCAGCCATTA 18 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX + 9407158 9407168 1.0E-05 ATTCATAAAAT 11 OLIG3_bHLH_DBD_dimeric_10_1 SELEX + 9402622 9402631 6.0E-06 ACCATATTTT 10 Zfx_MA0146.1 JASPAR - 9406447 9406460 4.0E-06 GGGGGCTCGGCCTG 14 V_FOXP1_01_M00987 TRANSFAC + 9405975 9405994 7.0E-06 TTGTTTTGCTTTTCTTTTTG 20 V_AREB6_01_M00412 TRANSFAC - 9407191 9407203 4.0E-06 ATCTCACCTGTCT 13 V_AP2ALPHA_Q6_M01857 TRANSFAC - 9406468 9406478 3.0E-06 CGCCTCCGGCC 11 V_CDPCR1_01_M00104 TRANSFAC + 9405897 9405906 7.0E-06 AATCGATTGC 10 V_SPI1_01_M01203 TRANSFAC + 9408642 9408658 0.0E+00 AGAATGAGGAAGTAACA 17 V_FOXP3_Q4_M00992 TRANSFAC + 9407202 9407218 2.0E-06 ATAATGTTAAGTCTGAG 17 V_OBOX1_01_M01450 TRANSFAC - 9407405 9407421 8.0E-06 TAAGAAGGATTTAAAAT 17 V_ZFX_01_M01593 TRANSFAC - 9406456 9406471 2.0E-06 GGCCAGGCCCCGGGGG 16 V_STAT3STAT3_Q3_M01220 TRANSFAC - 9402597 9402610 5.0E-06 GTGCTGGGAACAGG 14 V_BCL6_01_M01183 TRANSFAC + 9405976 9405991 7.0E-06 TGTTTTGCTTTTCTTT 16 V_LRH1_Q5_01_M02098 TRANSFAC - 9407113 9407123 9.0E-06 GCCCAAGGTCA 11 V_HOXA3_01_M00395 TRANSFAC - 9407164 9407172 7.0E-06 CGTAATTTT 9 V_STAT_Q6_M00777 TRANSFAC + 9406771 9406783 7.0E-06 GATGTTTCTGAGA 13 V_CEBP_C_M00201 TRANSFAC - 9405897 9405914 1.0E-05 TGTGTGGTGCAATCGATT 18 V_RFX4_03_M02789 TRANSFAC - 9406919 9406933 6.0E-06 TTCCCTAGCAACTCA 15 V_EAR2_Q2_M01728 TRANSFAC + 9408571 9408584 8.0E-06 TTTGCTTTGACTTT 14 V_P53_DECAMER_Q2_M00761 TRANSFAC - 9406028 9406037 1.0E-06 AGACAAGTCT 10 V_GKLF_02_M01588 TRANSFAC - 9406506 9406517 5.0E-06 GCCCCACCCTCC 12 V_CACCCBINDINGFACTOR_Q6_M00721 TRANSFAC + 9406501 9406516 1.0E-06 CAGCAGGAGGGTGGGG 16 V_PU1_Q4_M01172 TRANSFAC - 9408643 9408661 0.0E+00 AAATGTTACTTCCTCATTC 19 V_HOXD13_01_M01404 TRANSFAC + 9407156 9407171 6.0E-06 CCATTCATAAAATTAC 16 V_LYF1_01_M00141 TRANSFAC - 9406094 9406102 3.0E-06 TTTGGGAGA 9 V_LYF1_01_M00141 TRANSFAC + 9408603 9408611 3.0E-06 TTTGGGAGA 9 V_P53_02_M00272 TRANSFAC + 9406028 9406037 4.0E-06 AGACTTGTCT 10 V_MEF2A_Q6_M02024 TRANSFAC + 9407404 9407413 7.0E-06 TATTTTAAAT 10 V_CDP_04_M01344 TRANSFAC + 9407391 9407405 0.0E+00 TATTAATGATCAGTA 15 V_CDP_04_M01344 TRANSFAC - 9407391 9407405 3.0E-06 TACTGATCATTAATA 15 V_CDP_04_M01344 TRANSFAC - 9407394 9407408 7.0E-06 AAATACTGATCATTA 15 V_REX1_01_M01695 TRANSFAC + 9405885 9405894 1.0E-06 GCAGCCATTA 10 V_HNF6_Q6_M00639 TRANSFAC - 9408596 9408607 8.0E-06 CCAAATCAATGT 12 V_TST1_01_M00133 TRANSFAC - 9407403 9407417 0.0E+00 AAGGATTTAAAATAC 15 V_IPF1_Q4_M00436 TRANSFAC + 9407390 9407401 2.0E-06 GTATTAATGATC 12 V_SPI1_03_M02078 TRANSFAC + 9408646 9408655 3.0E-06 TGAGGAAGTA 10 V_ARID5A_03_M02736 TRANSFAC - 9405816 9405829 6.0E-06 AAAATATTTAAACT 14 V_SOX8_04_M02912 TRANSFAC + 9407156 9407169 5.0E-06 CCATTCATAAAATT 14 Ddit3_Cebpa_MA0019.1 JASPAR - 9407253 9407264 8.0E-06 GAATGCAATATC 12 V_HOXB9_01_M01426 TRANSFAC + 9407156 9407171 6.0E-06 CCATTCATAAAATTAC 16 V_IK1_01_M00086 TRANSFAC + 9406815 9406827 9.0E-06 TCCTGGGAATGCC 13 V_IRF3_Q3_M01279 TRANSFAC + 9405974 9405986 9.0E-06 ATTGTTTTGCTTT 13 V_OBOX2_01_M01364 TRANSFAC - 9407405 9407421 9.0E-06 TAAGAAGGATTTAAAAT 17 V_ELF5_01_M01197 TRANSFAC + 9408645 9408655 4.0E-06 ATGAGGAAGTA 11 V_CUX1_04_M02959 TRANSFAC + 9407391 9407405 0.0E+00 TATTAATGATCAGTA 15 V_CUX1_04_M02959 TRANSFAC - 9407391 9407405 3.0E-06 TACTGATCATTAATA 15 V_CUX1_04_M02959 TRANSFAC - 9407394 9407408 7.0E-06 AAATACTGATCATTA 15 V_OCT1_04_M00138 TRANSFAC - 9407369 9407391 0.0E+00 ACGTAAAAATGCAAAAGTTTAGA 23 V_GR_Q6_M00192 TRANSFAC - 9405932 9405950 6.0E-06 TATATCCACAATGTTCATA 19 V_MUSCLE_INI_B_M00321 TRANSFAC - 9406546 9406566 3.0E-06 ACCACACCACACCGAGGCGCC 21 V_GRE_C_M00205 TRANSFAC + 9402516 9402531 6.0E-06 TGTACCCAGTGTGCTC 16 V_SPIB_01_M01204 TRANSFAC + 9408642 9408658 0.0E+00 AGAATGAGGAAGTAACA 17 V_GATA1_09_M02254 TRANSFAC - 9407239 9407249 5.0E-06 ACTGATAAGGA 11 V_CETS1P54_01_M00032 TRANSFAC + 9406122 9406131 9.0E-06 ACAGGAAGTC 10 V_SMAD4_Q6_M00733 TRANSFAC + 9406511 9406525 4.0E-06 GTGGGGCGGACATCT 15 V_SMAD4_Q6_M00733 TRANSFAC - 9406690 9406704 2.0E-06 GTCGGCCAGCCACCC 15 V_STAF_02_M00264 TRANSFAC + 9406093 9406113 8.0E-06 ATCTCCCAAAGTGCTCCGCAG 21 V_STAF_02_M00264 TRANSFAC - 9406805 9406825 1.0E-06 CATTCCCAGGAGCCCTTCCAA 21 V_MYCN_01_M02259 TRANSFAC - 9406059 9406068 8.0E-06 CCCACGTGGC 10 V_BRACH_01_M00150 TRANSFAC + 9407183 9407206 4.0E-06 GCTGTGACAGACAGGTGAGATAAT 24 V_CTCF_02_M01259 TRANSFAC + 9406730 9406749 1.0E-05 TCACGTCCAGGAGGGGGCGA 20 V_IK3_01_M00088 TRANSFAC + 9406815 9406827 1.0E-06 TCCTGGGAATGCC 13 V_SOX17_04_M02904 TRANSFAC + 9407152 9407168 0.0E+00 TTTCCCATTCATAAAAT 17 V_SF1_Q6_01_M01132 TRANSFAC + 9407113 9407121 7.0E-06 TGACCTTGG 9 V_ZFP691_04_M02937 TRANSFAC + 9405918 9405934 4.0E-06 TATCTGACTCCCTTTAT 17 V_ELF1_Q6_M00746 TRANSFAC - 9406902 9406913 7.0E-06 AGAGGAGGAAGT 12 V_ELF1_Q6_M00746 TRANSFAC + 9408643 9408654 5.0E-06 GAATGAGGAAGT 12 V_GCNF_01_M00526 TRANSFAC - 9405994 9406011 6.0E-06 AAAATGTTCAAGTTCCAC 18 V_MTF1_06_M02882 TRANSFAC - 9406006 9406019 9.0E-06 AAAAACGAAAAATG 14 V_POU5F1_01_M01307 TRANSFAC - 9407254 9407263 6.0E-06 AATGCAATAT 10 V_EHF_06_M02745 TRANSFAC + 9408642 9408656 1.0E-06 AGAATGAGGAAGTAA 15 V_OBOX2_02_M03064 TRANSFAC - 9407405 9407421 9.0E-06 TAAGAAGGATTTAAAAT 17 V_TAL1_01_M01591 TRANSFAC + 9405979 9405991 6.0E-06 TTTGCTTTTCTTT 13 V_TAL1_01_M01591 TRANSFAC + 9406903 9406915 2.0E-06 CTTCCTCCTCTCT 13 V_IPF1_05_M01255 TRANSFAC - 9407390 9407401 5.0E-06 GATCATTAATAC 12 V_GATA1_04_M00128 TRANSFAC - 9407238 9407250 1.0E-06 AACTGATAAGGAG 13 V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC + 9406507 9406515 8.0E-06 GAGGGTGGG 9 V_FOXL1_02_M02857 TRANSFAC - 9405971 9405986 6.0E-06 AAAGCAAAACAATCAG 16 V_FOXL1_02_M02857 TRANSFAC - 9408568 9408583 6.0E-06 AAGTCAAAGCAAAAAA 16 V_FOXJ3_06_M02855 TRANSFAC - 9405971 9405987 6.0E-06 AAAAGCAAAACAATCAG 17 V_CBF_01_M01079 TRANSFAC + 9405936 9405951 3.0E-06 AACATTGTGGATATAG 16 V_PITX1_01_M01484 TRANSFAC - 9407405 9407421 2.0E-06 TAAGAAGGATTTAAAAT 17 V_ERR2_01_M01589 TRANSFAC - 9407110 9407121 5.0E-06 CCAAGGTCACTC 12 V_ZBTB4_04_M02929 TRANSFAC - 9407439 9407454 2.0E-06 TACTAACTGGCAGAAA 16 V_TCF4_Q5_M00671 TRANSFAC - 9406938 9406945 1.0E-05 CCTTTGAA 8 V_SPIC_02_M02077 TRANSFAC + 9408646 9408655 3.0E-06 TGAGGAAGTA 10 V_SRF_Q4_M00810 TRANSFAC - 9402467 9402484 1.0E-06 TCCAAAAAAGGAGCTTGG 18 V_SRF_02_M01257 TRANSFAC - 9402468 9402485 8.0E-06 ATCCAAAAAAGGAGCTTG 18 V_IRC900814_03_M02766 TRANSFAC - 9406004 9406019 6.0E-06 AAAAACGAAAAATGTT 16 V_ERR1_Q2_01_M02093 TRANSFAC - 9407110 9407120 2.0E-06 CAAGGTCACTC 11 V_IRF1_01_M00062 TRANSFAC - 9405976 9405988 2.0E-06 GAAAAGCAAAACA 13 V_IRF1_01_M00062 TRANSFAC - 9406008 9406020 5.0E-06 CAAAAACGAAAAA 13 V_RFX3_04_M02788 TRANSFAC - 9406915 9406937 6.0E-06 AGCCTTCCCTAGCAACTCAGCCA 23 V_GMEB1_04_M02865 TRANSFAC + 9406479 9406494 5.0E-06 CGGACGACGTCGTTGA 16 V_GATA5_03_M02756 TRANSFAC - 9407236 9407252 0.0E+00 TGAACTGATAAGGAGCT 17 V_BRN3C_01_M01408 TRANSFAC + 9407388 9407403 7.0E-06 ACGTATTAATGATCAG 16 V_OBOX5_01_M01381 TRANSFAC - 9407404 9407420 8.0E-06 AAGAAGGATTTAAAATA 17 V_ATATA_B_M00311 TRANSFAC - 9407044 9407053 8.0E-06 CTACATAAGC 10 V_OBOX6_06_M03067 TRANSFAC + 9407404 9407420 8.0E-06 TATTTTAAATCCTTCTT 17 V_SMAD1_01_M01590 TRANSFAC - 9405982 9405993 3.0E-06 AAAAAGAAAAGC 12 V_DMRT5_01_M01150 TRANSFAC + 9405963 9405977 8.0E-06 TTTTGTAACTGATTG 15 V_PAX6_01_M00097 TRANSFAC + 9407381 9407401 1.0E-06 CATTTTTACGTATTAATGATC 21 V_SPIB_03_M02076 TRANSFAC + 9408646 9408655 1.0E-06 TGAGGAAGTA 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.