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CDX4 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 1046 caudal type homeobox 4 chrX + 72662089 - 72667589 72667089 Transcription Factor Binding Sites   Download all TFBS in the CDX4 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 72665641 72665658 2.0E-06 TCAATAAATATTTGCTGA 18 FOXB1_forkhead_DBD_dimeric_18_1 SELEX - 72665641 72665658 1.0E-06 TCAGCAAATATTTATTGA 18 MEF2D_MADS_DBD_dimeric_12_1 SELEX - 72665760 72665771 1.0E-06 TTTAAAAATAGA 12 EWSR1-FLI1_MA0149.1 JASPAR - 72667621 72667638 0.0E+00 GAAGGGAAGGAAGGAAAA 18 EWSR1-FLI1_MA0149.1 JASPAR - 72667625 72667642 1.0E-06 CGGAGAAGGGAAGGAAGG 18 MEF2A_MADS_DBD_dimeric_12_1 SELEX - 72665760 72665771 1.0E-06 TTTAAAAATAGA 12 POU3F4_POU_DBD_monomeric_9_1 SELEX + 72666840 72666848 7.0E-06 AATGCAAAT 9 FOXD2_forkhead_DBD_dimeric_14_1 SELEX + 72665643 72665656 0.0E+00 AATAAATATTTGCT 14 FOXD2_forkhead_DBD_dimeric_14_1 SELEX - 72665643 72665656 0.0E+00 AGCAAATATTTATT 14 MEF2B_MADS_full_dimeric_12_1 SELEX - 72665760 72665771 5.0E-06 TTTAAAAATAGA 12 FOXD3_forkhead_DBD_dimeric_14_1 SELEX + 72665643 72665656 0.0E+00 AATAAATATTTGCT 14 FOXD3_forkhead_DBD_dimeric_14_1 SELEX - 72665643 72665656 0.0E+00 AGCAAATATTTATT 14 MEF2A_MA0052.1 JASPAR + 72665761 72665770 3.0E-06 CTATTTTTAA 10 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX + 72665637 72665650 6.0E-06 GTACTCAATAAATA 14 NR2F1_nuclearreceptor_DBD_dimeric_15_1 SELEX - 72667390 72667404 8.0E-06 GGGGCTAGAGGTCAC 15 FOXC1_forkhead_DBD_dimeric_14_1 SELEX + 72665643 72665656 1.0E-06 AATAAATATTTGCT 14 FOXC1_forkhead_DBD_dimeric_14_1 SELEX - 72665643 72665656 0.0E+00 AGCAAATATTTATT 14 EN1_homeodomain_full_dimeric_14_1 SELEX + 72665634 72665647 2.0E-06 TAAGTACTCAATAA 14 FOXC2_forkhead_DBD_dimeric_14_1 SELEX + 72665643 72665656 1.0E-06 AATAAATATTTGCT 14 FOXC2_forkhead_DBD_dimeric_14_1 SELEX - 72665643 72665656 1.0E-06 AGCAAATATTTATT 14 FEV_MA0156.1 JASPAR - 72665883 72665890 1.0E-05 CAGGAAAT 8 Pou5f1_MA0142.1 JASPAR + 72666834 72666848 5.0E-06 CATTTGAATGCAAAT 15 Pou5f1_MA0142.1 JASPAR - 72667920 72667934 9.0E-06 CTTTCTCATGCATCT 15 GBX2_homeodomain_DBD_dimeric_14_1 SELEX + 72665634 72665647 4.0E-06 TAAGTACTCAATAA 14 GBX2_homeodomain_DBD_dimeric_14_1 SELEX - 72665634 72665647 1.0E-06 TTATTGAGTACTTA 14 MAFK_bZIP_full_monomeric_12_1 SELEX + 72665648 72665659 1.0E-06 ATATTTGCTGAG 12 V_DBX1_01_M01483 TRANSFAC - 72665638 72665654 7.0E-06 CAAATATTTATTGAGTA 17 V_CDX2_Q5_01_M01659 TRANSFAC + 72665641 72665651 2.0E-06 TCAATAAATAT 11 V_APOLYA_B_M00310 TRANSFAC - 72666823 72666837 2.0E-06 AATGAAGGGCCATTT 15 V_NKX29_01_M01352 TRANSFAC - 72665630 72665646 8.0E-06 TATTGAGTACTTAGTGC 17 V_STAT_Q6_M00777 TRANSFAC - 72663571 72663583 6.0E-06 AGCTTTTCTGAGA 13 V_POU5F1_02_M02245 TRANSFAC + 72666834 72666848 5.0E-06 CATTTGAATGCAAAT 15 V_POU5F1_02_M02245 TRANSFAC - 72667920 72667934 9.0E-06 CTTTCTCATGCATCT 15 V_MEF2_02_M00231 TRANSFAC - 72665756 72665777 1.0E-06 TTCCCTTTTAAAAATAGAGAAC 22 V_IRF_Q6_01_M00972 TRANSFAC + 72665769 72665779 9.0E-06 AAAAGGGAAAA 11 V_IRF_Q6_01_M00972 TRANSFAC + 72666816 72666826 1.0E-06 GAAAGTGAAAT 11 V_IRF2_Q6_M01882 TRANSFAC + 72666814 72666829 1.0E-06 GTGAAAGTGAAATGGC 16 V_POU2F3_01_M01476 TRANSFAC - 72666831 72666846 5.0E-06 TTGCATTCAAATGAAG 16 V_POU2F3_01_M01476 TRANSFAC + 72666837 72666852 1.0E-06 TTGAATGCAAATGCTA 16 V_PITX3_Q2_M01735 TRANSFAC + 72665825 72665833 7.0E-06 TGGATTAGC 9 V_AP2_Q6_01_M00915 TRANSFAC - 72666956 72666968 9.0E-06 CACCCCTCAGGCT 13 V_P50RELAP65_Q5_01_M01224 TRANSFAC - 72665771 72665782 1.0E-05 GGGTTTTCCCTT 12 V_OCT_C_M00210 TRANSFAC - 72666839 72666851 6.0E-06 AGCATTTGCATTC 13 V_COUPTF_Q6_M01036 TRANSFAC + 72667386 72667408 8.0E-06 CGACGTGACCTCTAGCCCCGCCG 23 V_AIRE_02_M01000 TRANSFAC - 72666919 72666943 4.0E-06 GTTTCTTACGAGGGTATCCAGGTGA 25 V_LYF1_01_M00141 TRANSFAC - 72665808 72665816 9.0E-06 TTTGGGAAA 9 V_MEF2A_Q6_M02024 TRANSFAC + 72665762 72665771 1.0E-06 TATTTTTAAA 10 V_ARID5A_03_M02736 TRANSFAC - 72665641 72665654 7.0E-06 CAAATATTTATTGA 14 V_E2F1_01_M01250 TRANSFAC - 72666937 72666944 1.0E-05 CGTTTCTT 8 V_RSRFC4_Q2_M00407 TRANSFAC - 72665757 72665773 8.0E-06 CTTTTAAAAATAGAGAA 17 V_ARID3A_02_M02839 TRANSFAC - 72663547 72663561 1.0E-05 GCAGGTATCAAATAG 15 V_IRF3_Q3_M01279 TRANSFAC - 72665770 72665782 8.0E-06 GGGTTTTCCCTTT 13 V_IRF3_Q3_M01279 TRANSFAC + 72667813 72667825 6.0E-06 TGATTTTCGCCTT 13 V_EVI1_01_M00078 TRANSFAC + 72663575 72663590 1.0E-05 AGAAAAGCTAAGAGAC 16 V_RFX4_04_M02893 TRANSFAC + 72666919 72666933 1.0E-05 TCACCTGGATACCCT 15 V_HNF3_Q6_M00791 TRANSFAC + 72665640 72665652 9.0E-06 CTCAATAAATATT 13 V_OBOX2_01_M01364 TRANSFAC + 72665820 72665836 5.0E-06 ATAGATGGATTAGCTAA 17 V_MEF2_03_M00232 TRANSFAC - 72665756 72665777 5.0E-06 TTCCCTTTTAAAAATAGAGAAC 22 V_SFPI1_04_M02896 TRANSFAC - 72665755 72665768 5.0E-06 AAAAATAGAGAACC 14 V_JUNDM2_04_M02876 TRANSFAC - 72667589 72667604 5.0E-06 ATTGATTACTCACCCG 16 V_OCT1_04_M00138 TRANSFAC + 72666833 72666855 0.0E+00 TCATTTGAATGCAAATGCTATGT 23 V_XFD2_01_M00268 TRANSFAC + 72665641 72665654 5.0E-06 TCAATAAATATTTG 14 V_ATF3_Q6_M00513 TRANSFAC - 72666870 72666883 1.0E-05 GGCTGACGTCAAGG 14 V_BLIMP1_Q6_M01066 TRANSFAC + 72666814 72666829 1.0E-06 GTGAAAGTGAAATGGC 16 V_OCT1_B_M00342 TRANSFAC + 72666840 72666849 5.0E-06 AATGCAAATG 10 V_OCT_Q6_M00795 TRANSFAC - 72666840 72666850 8.0E-06 GCATTTGCATT 11 V_NKX23_01_M01457 TRANSFAC + 72665631 72665646 2.0E-06 CACTAAGTACTCAATA 16 V_NKX23_01_M01457 TRANSFAC - 72665631 72665646 0.0E+00 TATTGAGTACTTAGTG 16 V_PAX8_B_M00328 TRANSFAC + 72667916 72667933 1.0E-05 AAAGAGATGCATGAGAAA 18 V_ATF1_Q6_M00691 TRANSFAC + 72666870 72666880 1.0E-06 CCTTGACGTCA 11 V_OBOX2_02_M03064 TRANSFAC + 72665820 72665836 5.0E-06 ATAGATGGATTAGCTAA 17 V_OCT2_01_M01368 TRANSFAC - 72666831 72666846 6.0E-06 TTGCATTCAAATGAAG 16 V_OCT2_01_M01368 TRANSFAC + 72666837 72666852 1.0E-06 TTGAATGCAAATGCTA 16 V_NKX3A_02_M01383 TRANSFAC - 72665630 72665646 2.0E-06 TATTGAGTACTTAGTGC 17 V_NKX3A_02_M01383 TRANSFAC + 72665631 72665647 1.0E-06 CACTAAGTACTCAATAA 17 V_E2F6_01_M01252 TRANSFAC - 72666937 72666944 1.0E-05 CGTTTCTT 8 V_PITX1_01_M01484 TRANSFAC + 72665820 72665836 6.0E-06 ATAGATGGATTAGCTAA 17 V_ATF2_Q5_M01862 TRANSFAC - 72666872 72666883 5.0E-06 GGCTGACGTCAA 12 V_STAT6_02_M00500 TRANSFAC - 72665723 72665730 1.0E-05 GATTTCCT 8 V_RSRFC4_01_M00026 TRANSFAC + 72665758 72665773 2.0E-06 TCTCTATTTTTAAAAG 16 V_IRF1_Q6_01_M01881 TRANSFAC - 72666815 72666828 1.0E-06 CCATTTCACTTTCA 14 V_HFH3_01_M00289 TRANSFAC - 72665641 72665653 9.0E-06 AAATATTTATTGA 13 V_EWSR1FLI1_01_M02252 TRANSFAC - 72667621 72667638 0.0E+00 GAAGGGAAGGAAGGAAAA 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 72667625 72667642 1.0E-06 CGGAGAAGGGAAGGAAGG 18 V_FOXJ2_01_M00422 TRANSFAC + 72665638 72665655 1.0E-06 TACTCAATAAATATTTGC 18 V_FOXJ2_01_M00422 TRANSFAC - 72665644 72665661 4.0E-06 CACTCAGCAAATATTTAT 18 V_OBOX3_02_M03065 TRANSFAC + 72665820 72665836 2.0E-06 ATAGATGGATTAGCTAA 17 V_ATF_B_M00338 TRANSFAC + 72666872 72666883 2.0E-06 TTGACGTCAGCC 12 V_TCF3_05_M02920 TRANSFAC + 72663494 72663508 6.0E-06 AGCCTTAAAACAAAT 15 V_FEV_01_M02269 TRANSFAC - 72665883 72665890 1.0E-05 CAGGAAAT 8 V_OBOX3_01_M01466 TRANSFAC + 72665820 72665836 2.0E-06 ATAGATGGATTAGCTAA 17 V_TR4_03_M01782 TRANSFAC - 72667391 72667403 7.0E-06 GGGCTAGAGGTCA 13 V_OCT4_01_M01125 TRANSFAC + 72666834 72666848 2.0E-06 CATTTGAATGCAAAT 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.