Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

NDC80


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
10403 NDC80 kinetochore complex component chr18 +2566509 - 2572009 2571509

Transcription Factor Binding Sites

 
Download all TFBS in the NDC80 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
SOX10_HMG_full_dimeric_15_3 SELEX - 2571752 2571766 2.0E-06 CTAAATTTAAGTCAT 15
ZNF713_C2H2_full_monomeric_17_1 SELEX - 2571392 2571408 1.0E-05 ACGAAGACTGGCACGAC 17
SOX21_HMG_DBD_dimeric_13_2 SELEX - 2571753 2571765 7.0E-06 TAAATTTAAGTCA 13
NHLH1_MA0048.1 JASPAR + 2571451 2571462 8.0E-06 ACGCAGCTGGGC 12
NHLH1_MA0048.1 JASPAR - 2571451 2571462 8.0E-06 GCCCAGCTGCGT 12
FOXG1_forkhead_DBD_dimeric_17_1 SELEX - 2574967 2574983 6.0E-06 AAGAAAAATAGAAAACA 17
FOXL1_forkhead_full_dimeric_13_1 SELEX + 2573053 2573065 0.0E+00 TGTAAATAAACAA 13
SOX8_HMG_DBD_dimeric_16_1 SELEX - 2574430 2574445 2.0E-06 TATAATGTACAGTGAT 16
SOX9_HMG_full_dimeric_17_3 SELEX - 2571751 2571767 7.0E-06 TCTAAATTTAAGTCATT 17
TBX20_TBX_DBD_dimeric_19_1 SELEX + 2568369 2568387 3.0E-06 AAGAGTGACAGTGACACAT 19
TBX20_TBX_DBD_dimeric_19_1 SELEX - 2568369 2568387 5.0E-06 ATGTGTCACTGTCACTCTT 19
GATA5_GATA_DBD_monomeric_8_1 SELEX + 2573611 2573618 7.0E-06 AGATAAGA 8
XBP1_bZIP_DBD_dimeric_12_1 SELEX + 2571528 2571539 2.0E-06 AATGACGTCAGC 12
XBP1_bZIP_DBD_dimeric_12_1 SELEX - 2571528 2571539 1.0E-06 GCTGACGTCATT 12
Creb5_bZIP_DBD_dimeric_12_1 SELEX - 2571528 2571539 5.0E-06 GCTGACGTCATT 12
GATA4_GATA_DBD_monomeric_8_1 SELEX + 2573611 2573618 7.0E-06 AGATAAGA 8
IRF7_IRF_DBD_trimeric_17_1 SELEX + 2571637 2571653 9.0E-06 TTACAGAAATTCGGTCC 17
Pax4_MA0068.1 JASPAR - 2574952 2574981 9.0E-06 GAAAAATAGAAAACAACTCTTTAAAATAAA 30
TBX1_TBX_DBD_dimeric_19_1 SELEX + 2568369 2568387 5.0E-06 AAGAGTGACAGTGACACAT 19
JDP2_bZIP_full_dimeric_12_1 SELEX + 2571528 2571539 3.0E-06 AATGACGTCAGC 12
JDP2_bZIP_full_dimeric_12_1 SELEX - 2571528 2571539 5.0E-06 GCTGACGTCATT 12
IRF1_MA0050.1 JASPAR + 2570716 2570727 3.0E-06 AAAATTGAAACT 12
Sox17_HMG_DBD_dimeric_15_2 SELEX + 2571752 2571766 6.0E-06 ATGACTTAAATTTAG 15
Sox17_HMG_DBD_dimeric_15_2 SELEX - 2571752 2571766 2.0E-06 CTAAATTTAAGTCAT 15
Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 2573054 2573064 0.0E+00 GTAAATAAACA 11
FOXJ3_forkhead_DBD_dimeric_14_1 SELEX - 2574967 2574980 3.0E-06 AAAAATAGAAAACA 14
ATF7_bZIP_DBD_dimeric_14_1 SELEX + 2571527 2571540 4.0E-06 TAATGACGTCAGCG 14
ATF7_bZIP_DBD_dimeric_14_1 SELEX - 2571527 2571540 6.0E-06 CGCTGACGTCATTA 14
CREB3_bZIP_full_dimeric_14_1 SELEX + 2571527 2571540 2.0E-06 TAATGACGTCAGCG 14
CREB3_bZIP_full_dimeric_14_1 SELEX - 2571527 2571540 5.0E-06 CGCTGACGTCATTA 14
SOX18_HMG_full_dimeric_15_1 SELEX + 2570990 2571004 8.0E-06 AACACTTGGATTCTT 15
NFATC1_NFAT_full_dimeric_15_1 SELEX + 2571878 2571892 7.0E-06 TTCCCAAGGAGGAAA 15
YY2_C2H2_full_monomeric_11_1 SELEX + 2571288 2571298 8.0E-06 GCCGCCATGTT 11
FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 2573054 2573064 0.0E+00 GTAAATAAACA 11
GATA3_GATA_full_monomeric_8_1 SELEX + 2573611 2573618 7.0E-06 AGATAAGA 8
TEAD3_TEA_DBD_dimeric_17_1 SELEX + 2574786 2574802 7.0E-06 ACATTACAAGCATTATA 17
INSM1_MA0155.1 JASPAR - 2570982 2570993 6.0E-06 TGTTTGGGGGCG 12
EN1_homeodomain_full_dimeric_14_1 SELEX + 2570769 2570782 4.0E-06 TAATGGCACAATTG 14
Pou5f1_MA0142.1 JASPAR + 2573997 2574011 6.0E-06 TTTTGTTCTGCAGAG 15
LHX6_homeodomain_full_dimeric_12_1 SELEX + 2568387 2568398 3.0E-06 TGATGGCAGTCA 12
TEAD1_TEA_full_dimeric_17_1 SELEX + 2574786 2574802 7.0E-06 ACATTACAAGCATTATA 17
NR3C1_MA0113.1 JASPAR + 2574275 2574292 8.0E-06 GGGAGGAATAAGTCCTGG 18
HSFY2_HSF_DBD_dimeric_9_1 SELEX + 2571558 2571566 8.0E-06 ATTCGAACG 9
FOXB1_forkhead_full_monomeric_9_1 SELEX + 2573053 2573061 4.0E-06 TGTAAATAA 9
Sox2_MA0143.1 JASPAR + 2573996 2574010 1.0E-06 TTTTTGTTCTGCAGA 15
FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 2573052 2573064 0.0E+00 ATGTAAATAAACA 13
E2F1_E2F_DBD_dimeric_12_1 SELEX + 2571742 2571753 8.0E-06 GATGGCGCCAAT 12
BATF3_bZIP_DBD_dimeric_14_1 SELEX + 2571527 2571540 1.0E-06 TAATGACGTCAGCG 14
BATF3_bZIP_DBD_dimeric_14_1 SELEX - 2571527 2571540 1.0E-06 CGCTGACGTCATTA 14
E2F1_E2F_DBD_monomeric_14_1 SELEX + 2571741 2571754 8.0E-06 TGATGGCGCCAATG 14
FOXJ2_forkhead_DBD_dimeric_14_1 SELEX - 2574967 2574980 1.0E-06 AAAAATAGAAAACA 14
IRX5_homeodomain_DBD_dimeric_12_1 SELEX + 2574784 2574795 9.0E-06 CAACATTACAAG 12
V_FREAC7_01_M00293 TRANSFAC + 2573053 2573068 4.0E-06 TGTAAATAAACAAGGC 16
V_TCF3_01_M01594 TRANSFAC + 2573996 2574008 8.0E-06 TTTTTGTTCTGCA 13
V_MEQCJUN_02_M02048 TRANSFAC + 2571528 2571538 7.0E-06 AATGACGTCAG 11
V_MEQCJUN_02_M02048 TRANSFAC - 2571529 2571539 2.0E-06 GCTGACGTCAT 11
V_FOXA2_04_M02749 TRANSFAC + 2573049 2573065 1.0E-06 AGGATGTAAATAAACAA 17
V_FOXA2_04_M02749 TRANSFAC + 2573053 2573069 1.0E-05 TGTAAATAAACAAGGCC 17
V_HMGIY_Q3_M01010 TRANSFAC - 2570117 2570131 1.0E-05 ACTTCAATTTTTAAG 15
V_EVI1_04_M00081 TRANSFAC - 2570894 2570908 9.0E-06 TGCTAAAATAGGATT 15
V_FOXO4_02_M00476 TRANSFAC + 2574963 2574976 8.0E-06 GAGTTGTTTTCTAT 14
V_MMEF2_Q6_M00405 TRANSFAC - 2574950 2574965 1.0E-06 CTCTTTAAAATAAAAA 16
V_POU5F1_02_M02245 TRANSFAC + 2573997 2574011 6.0E-06 TTTTGTTCTGCAGAG 15
V_SPDEF_04_M02915 TRANSFAC + 2570889 2570904 1.0E-05 GAGGAAATCCTATTTT 16
V_CREB_Q4_01_M00917 TRANSFAC - 2571530 2571540 2.0E-06 CGCTGACGTCA 11
V_ZTA_Q2_M00711 TRANSFAC + 2568374 2568386 7.0E-06 TGACAGTGACACA 13
V_IRF_Q6_01_M00972 TRANSFAC + 2570716 2570726 3.0E-06 AAAATTGAAAC 11
V_IRF_Q6_01_M00972 TRANSFAC - 2574969 2574979 1.0E-05 AAAATAGAAAA 11
V_IRF2_Q6_M01882 TRANSFAC + 2570714 2570729 1.0E-06 GGAAAATTGAAACTCA 16
V_IRF2_Q6_M01882 TRANSFAC - 2574966 2574981 8.0E-06 GAAAAATAGAAAACAA 16
V_FOXO3A_Q1_M01137 TRANSFAC + 2573053 2573064 4.0E-06 TGTAAATAAACA 12
V_SOX11_04_M02899 TRANSFAC - 2568856 2568869 5.0E-06 TAAATTGTTCTTGA 14
V_ATF3_Q6_01_M01863 TRANSFAC + 2571529 2571539 1.0E-06 ATGACGTCAGC 11
V_JUNDM2_03_M02772 TRANSFAC - 2571526 2571541 1.0E-06 GCGCTGACGTCATTAC 16
V_NR3C1_01_M02219 TRANSFAC + 2574275 2574292 8.0E-06 GGGAGGAATAAGTCCTGG 18
V_HOXC13_01_M01317 TRANSFAC + 2570111 2570126 7.0E-06 CTTGCTCTTAAAAATT 16
V_CDP_04_M01344 TRANSFAC - 2571217 2571231 5.0E-06 TTTTCATGATCACTA 15
V_ELF4_04_M02850 TRANSFAC - 2574948 2574964 2.0E-06 TCTTTAAAATAAAAATT 17
V_HMBOX1_01_M01456 TRANSFAC + 2570759 2570775 4.0E-06 CAACGCTAGTTAATGGC 17
V_COMP1_01_M00057 TRANSFAC + 2569834 2569857 1.0E-06 TCTTTGCTTTGACCAGAAGCCATA 24
V_SOX13_03_M02797 TRANSFAC + 2568856 2568871 0.0E+00 TCAAGAACAATTTACA 16
V_SOX7_03_M02807 TRANSFAC + 2568854 2568875 3.0E-06 CTTCAAGAACAATTTACAAAAA 22
V_FOXA2_02_M02853 TRANSFAC + 2570751 2570765 1.0E-06 AAAAATAACAACGCT 15
V_FREAC3_01_M00291 TRANSFAC + 2573049 2573064 0.0E+00 AGGATGTAAATAAACA 16
V_FOXO1_02_M00474 TRANSFAC + 2574963 2574976 4.0E-06 GAGTTGTTTTCTAT 14
V_GATA3_05_M02859 TRANSFAC + 2574417 2574438 4.0E-06 TTACTCTGATCTGATCACTGTA 22
V_PAX9_B_M00329 TRANSFAC + 2571448 2571471 4.0E-06 GTGACGCAGCTGGGCGCGACCAGC 24
V_IRF2_01_M00063 TRANSFAC + 2570715 2570727 1.0E-06 GAAAATTGAAACT 13
V_AP1_Q6_01_M00925 TRANSFAC + 2571752 2571760 9.0E-06 ATGACTTAA 9
V_FOXK1_04_M02856 TRANSFAC + 2570749 2570763 7.0E-06 CCAAAAATAACAACG 15
V_HNF3A_01_M01261 TRANSFAC + 2573052 2573061 9.0E-06 ATGTAAATAA 10
V_EVI1_01_M00078 TRANSFAC + 2573611 2573626 1.0E-05 AGATAAGAGAAGGCTA 16
V_IRF_Q6_M00772 TRANSFAC - 2570716 2570730 1.0E-06 CTGAGTTTCAATTTT 15
V_IRF_Q6_M00772 TRANSFAC + 2574965 2574979 7.0E-06 GTTGTTTTCTATTTT 15
V_SOX18_03_M02801 TRANSFAC - 2568855 2568870 4.0E-06 GTAAATTGTTCTTGAA 16
V_ISRE_01_M00258 TRANSFAC - 2570714 2570728 0.0E+00 GAGTTTCAATTTTCC 15
V_CUX1_04_M02959 TRANSFAC - 2571217 2571231 5.0E-06 TTTTCATGATCACTA 15
V_OCT1_04_M00138 TRANSFAC - 2574942 2574964 1.0E-06 TCTTTAAAATAAAAATTAAAATT 23
V_REX1_03_M01744 TRANSFAC - 2571287 2571298 2.0E-06 AACATGGCGGCG 12
V_MEF2_04_M00233 TRANSFAC - 2574968 2574989 5.0E-06 TGCTTTAAGAAAAATAGAAAAC 22
V_MEF2_Q6_01_M00941 TRANSFAC - 2570749 2570760 5.0E-06 TGTTATTTTTGG 12
V_ISGF3G_03_M02771 TRANSFAC + 2570715 2570729 0.0E+00 GAAAATTGAAACTCA 15
V_CREB_Q2_01_M00916 TRANSFAC - 2571526 2571539 4.0E-06 GCTGACGTCATTAC 14
V_CREB_Q2_01_M00916 TRANSFAC + 2571528 2571541 3.0E-06 AATGACGTCAGCGC 14
V_INSM1_01_M02268 TRANSFAC - 2570982 2570993 6.0E-06 TGTTTGGGGGCG 12
V_AP1_Q2_01_M00924 TRANSFAC + 2571753 2571764 9.0E-06 TGACTTAAATTT 12
V_IRF7_01_M00453 TRANSFAC + 2570713 2570730 4.0E-06 GGGAAAATTGAAACTCAG 18
V_IRF7_01_M00453 TRANSFAC - 2571547 2571564 0.0E+00 TTCGAATTTGAAATTCTC 18
V_GR_Q6_02_M01836 TRANSFAC - 2568857 2568869 4.0E-06 TAAATTGTTCTTG 13
V_CREM_Q6_M01820 TRANSFAC - 2571527 2571537 5.0E-06 TGACGTCATTA 11
V_CREM_Q6_M01820 TRANSFAC + 2571530 2571540 2.0E-06 TGACGTCAGCG 11
V_YY1_03_M02044 TRANSFAC + 2571288 2571299 1.0E-06 GCCGCCATGTTG 12
V_VJUN_01_M00036 TRANSFAC + 2571526 2571541 1.0E-06 GTAATGACGTCAGCGC 16
V_VJUN_01_M00036 TRANSFAC - 2571526 2571541 5.0E-06 GCGCTGACGTCATTAC 16
V_ATF1_Q6_M00691 TRANSFAC - 2571530 2571540 5.0E-06 CGCTGACGTCA 11
V_SOX15_03_M02799 TRANSFAC + 2568856 2568872 2.0E-06 TCAAGAACAATTTACAA 17
V_MTF1_06_M02882 TRANSFAC - 2574965 2574978 5.0E-06 AAATAGAAAACAAC 14
V_MTF1_06_M02882 TRANSFAC - 2574974 2574987 3.0E-06 CTTTAAGAAAAATA 14
V_TAL1_01_M01591 TRANSFAC - 2574006 2574018 3.0E-06 TTTGCTTCTCTGC 13
V_CEBPA_01_M00116 TRANSFAC + 2568864 2568877 7.0E-06 AATTTACAAAAACT 14
V_CEBPA_01_M00116 TRANSFAC - 2570899 2570912 9.0E-06 ACTTTGCTAAAATA 14
V_OSR2_04_M02889 TRANSFAC + 2570778 2570793 9.0E-06 AATTGCTACCAGACCC 16
V_CAAT_C_M00200 TRANSFAC - 2568828 2568852 3.0E-06 CCCAATTATCATCCCTGTCCATTTG 25
V_FOXL1_02_M02857 TRANSFAC - 2574949 2574964 3.0E-06 TCTTTAAAATAAAAAT 16
V_SIRT6_01_M01797 TRANSFAC + 2573611 2573618 7.0E-06 AGATAAGA 8
V_FOXL1_04_M02753 TRANSFAC + 2573049 2573065 4.0E-06 AGGATGTAAATAAACAA 17
V_FOXL1_04_M02753 TRANSFAC + 2573053 2573069 5.0E-06 TGTAAATAAACAAGGCC 17
V_ATF1_03_M02738 TRANSFAC + 2571526 2571541 3.0E-06 GTAATGACGTCAGCGC 16
V_ATF1_03_M02738 TRANSFAC - 2571526 2571541 4.0E-06 GCGCTGACGTCATTAC 16
V_CPHX_01_M01478 TRANSFAC - 2574421 2574434 5.0E-06 GTGATCAGATCAGA 14
V_CPHX_01_M01478 TRANSFAC + 2574422 2574435 9.0E-06 CTGATCTGATCACT 14
V_ATF2_Q5_M01862 TRANSFAC - 2571529 2571540 1.0E-06 CGCTGACGTCAT 12
V_BDP1_01_M01796 TRANSFAC + 2570869 2570880 6.0E-06 GGATTCAAACTC 12
V_HNF1B_01_M01425 TRANSFAC - 2570760 2570776 5.0E-06 TGCCATTAACTAGCGTT 17
V_FOXO3_01_M00477 TRANSFAC + 2574963 2574976 7.0E-06 GAGTTGTTTTCTAT 14
V_STAT6_02_M00500 TRANSFAC - 2570890 2570897 1.0E-05 GATTTCCT 8
V_SOX21_04_M02907 TRANSFAC - 2568855 2568871 3.0E-06 TGTAAATTGTTCTTGAA 17
V_IRF1_Q6_01_M01881 TRANSFAC - 2570715 2570728 5.0E-06 GAGTTTCAATTTTC 14
V_TCFAP2B_04_M02924 TRANSFAC + 2571042 2571056 9.0E-06 TGAGCCTCCGGCAAG 15
V_SOX8_03_M02808 TRANSFAC - 2568856 2568872 1.0E-06 TTGTAAATTGTTCTTGA 17
V_SOX8_03_M02808 TRANSFAC + 2574969 2574985 6.0E-06 TTTTCTATTTTTCTTAA 17
V_SOX2_01_M02246 TRANSFAC + 2573996 2574010 1.0E-06 TTTTTGTTCTGCAGA 15
V_GATA2_03_M00349 TRANSFAC + 2573609 2573618 9.0E-06 CCAGATAAGA 10
V_SRF_06_M02916 TRANSFAC - 2574971 2574987 3.0E-06 CTTTAAGAAAAATAGAA 17
V_FOXJ2_01_M00422 TRANSFAC + 2573052 2573069 7.0E-06 ATGTAAATAAACAAGGCC 18
V_IRF1_01_M00062 TRANSFAC + 2570715 2570727 0.0E+00 GAAAATTGAAACT 13
V_SOX12_03_M02796 TRANSFAC - 2568855 2568868 5.0E-06 AAATTGTTCTTGAA 14
V_GATA5_03_M02756 TRANSFAC + 2573606 2573622 9.0E-06 CTTCCAGATAAGAGAAG 17
V_UF1H3BETA_Q6_M01068 TRANSFAC - 2571130 2571143 1.0E-06 GGTGGGAGAGGGGC 14
V_GATA1_02_M00126 TRANSFAC + 2573607 2573620 7.0E-06 TTCCAGATAAGAGA 14
V_SREBP1_Q5_M01173 TRANSFAC - 2571441 2571455 9.0E-06 TGCGTCACCCCAGGA 15
V_ATF_B_M00338 TRANSFAC + 2571529 2571540 2.0E-06 ATGACGTCAGCG 12
V_EVI1_03_M00080 TRANSFAC + 2573611 2573621 6.0E-06 AGATAAGAGAA 11
V_FOXK1_03_M02752 TRANSFAC + 2573049 2573065 1.0E-06 AGGATGTAAATAAACAA 17
V_FOXK1_03_M02752 TRANSFAC + 2573053 2573069 8.0E-06 TGTAAATAAACAAGGCC 17
V_DMRT5_01_M01150 TRANSFAC + 2570917 2570931 3.0E-06 TACTGTTACTGTTGT 15
V_PAX6_01_M00097 TRANSFAC - 2570701 2570721 8.0E-06 AATTTTCCCGTCTGAATTTCT 21
V_NANOG_02_M01247 TRANSFAC - 2573991 2574010 3.0E-06 TCTGCAGAACAAAAACCCTA 20
V_GATA1_06_M00347 TRANSFAC + 2573609 2573618 5.0E-06 CCAGATAAGA 10
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL