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SF3B4 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 10262 splicing factor 3b, subunit 4, 49kDa chr1 - 149899644 - 149905144 149900144 Transcription Factor Binding Sites   Download all TFBS in the SF3B4 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NKX2-8_homeodomain_full_monomeric_9_1 SELEX + 149900385 149900393 8.0E-06 GCACTTGAA 9 SOX21_HMG_DBD_dimeric_15_1 SELEX + 149899973 149899987 7.0E-06 AAAAATTTCAGTTTT 15 GABPA_MA0062.2 JASPAR - 149899711 149899721 1.0E-06 CCGGAAGTGGA 11 TBX1_TBX_DBD_dimeric_20_2 SELEX - 149899438 149899457 3.0E-06 CTGAGGCCTCTGGGTGTGAT 20 SOX4_HMG_DBD_dimeric_16_1 SELEX + 149899972 149899987 1.0E-06 CAAAAATTTCAGTTTT 16 ZNF306_C2H2_full_monomeric_14_1 SELEX + 149899107 149899120 6.0E-06 TGGTCCAGCCTGGA 14 ELF4_ETS_full_monomeric_12_1 SELEX - 149899713 149899724 8.0E-06 GCCCCGGAAGTG 12 ZNF75A_C2H2_DBD_monomeric_12_1 SELEX + 149900160 149900171 4.0E-06 GGTTTTCCCTCA 12 SOX8_HMG_full_dimeric_15_1 SELEX + 149899973 149899987 1.0E-06 AAAAATTTCAGTTTT 15 Sox17_HMG_DBD_dimeric_15_1 SELEX + 149899973 149899987 8.0E-06 AAAAATTTCAGTTTT 15 SPIB_ETS_DBD_monomeric_14_1 SELEX - 149900416 149900429 6.0E-06 AAATAGGGGAACTG 14 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX + 149903464 149903477 9.0E-06 GTGAAGAGAAAACA 14 NR2E1_nuclearreceptor_full_dimeric_14_1 SELEX - 149899396 149899409 8.0E-06 CACTCAAAAAATCA 14 Rarb_nuclearreceptor_DBD_dimeric_17_1 SELEX - 149900194 149900210 6.0E-06 ACGTCACTCTAAGCTCA 17 SP1_MA0079.2 JASPAR + 149899472 149899481 7.0E-06 CCCCGCCCCC 10 SP1_C2H2_DBD_monomeric_11_1 SELEX + 149899471 149899481 4.0E-06 ACCCCGCCCCC 11 SP1_C2H2_DBD_monomeric_11_1 SELEX - 149899741 149899751 1.0E-05 GCCCCGCCCAC 11 SOX7_HMG_full_dimeric_17_1 SELEX + 149899972 149899988 4.0E-06 CAAAAATTTCAGTTTTA 17 Stat3_MA0144.1 JASPAR + 149899766 149899775 1.0E-05 TGCCTGGAAG 10 IRF9_IRF_full_trimeric_15_1 SELEX - 149899976 149899990 7.0E-06 ATTAAAACTGAAATT 15 Nkx3-2_MA0122.1 JASPAR - 149901324 149901332 2.0E-06 TTAAGTGGA 9 NR3C1_MA0113.1 JASPAR + 149899967 149899984 6.0E-06 AAGAACAAAAATTTCAGT 18 Sox11_HMG_DBD_dimeric_15_1 SELEX + 149899973 149899987 1.0E-06 AAAAATTTCAGTTTT 15 IRF5_IRF_full_dimeric_14_1 SELEX + 149899800 149899813 6.0E-06 CCGAAACTTAACCT 14 SPI1_ETS_full_monomeric_14_1 SELEX - 149900416 149900429 5.0E-06 AAATAGGGGAACTG 14 ETV6_ETS_full_dimeric_15_1 SELEX - 149899707 149899721 0.0E+00 CCGGAAGTGGAAGTC 15 ELF5_MA0136.1 JASPAR + 149900425 149900433 2.0E-06 TATTTCCTT 9 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 149903469 149903481 7.0E-06 GAGAAAACAAAGA 13 SOX9_HMG_full_dimeric_17_1 SELEX + 149899972 149899988 2.0E-06 CAAAAATTTCAGTTTTA 17 V_SPI1_01_M01203 TRANSFAC - 149900413 149900429 1.0E-06 AAATAGGGGAACTGGGT 17 V_TEL1_02_M02070 TRANSFAC - 149899713 149899722 5.0E-06 CCCGGAAGTG 10 V_DBX1_01_M01483 TRANSFAC - 149899980 149899996 3.0E-06 AAATATATTAAAACTGA 17 V_TCF3_01_M01594 TRANSFAC - 149899965 149899977 4.0E-06 TTTTTGTTCTTTT 13 V_TCF3_01_M01594 TRANSFAC - 149903469 149903481 9.0E-06 TCTTTGTTTTCTC 13 V_APOLYA_B_M00310 TRANSFAC - 149900380 149900394 6.0E-06 ATTCAAGTGCAATTT 15 V_AR_02_M00953 TRANSFAC - 149900314 149900340 1.0E-06 CAGATGGGGCCAGAGTGTTCTAGAGAT 27 V_BTEB3_Q5_M01865 TRANSFAC + 149899514 149899526 5.0E-06 GGAAGGGAGGAGT 13 V_NERF_01_M01976 TRANSFAC - 149899713 149899722 9.0E-06 CCCGGAAGTG 10 V_SATB1_Q3_M01723 TRANSFAC - 149901281 149901296 7.0E-06 AGAATTAAAGACACCA 16 V_AR_Q6_01_M01996 TRANSFAC - 149899967 149899981 6.0E-06 GAAATTTTTGTTCTT 15 V_GABP_B_M00341 TRANSFAC - 149899711 149899722 2.0E-06 CCCGGAAGTGGA 12 V_SP1_Q6_01_M00931 TRANSFAC - 149899471 149899480 7.0E-06 GGGGCGGGGT 10 V_IRF_Q6_01_M00972 TRANSFAC - 149899977 149899987 2.0E-06 AAAACTGAAAT 11 V_IRF2_Q6_M01882 TRANSFAC - 149899974 149899989 9.0E-06 TTAAAACTGAAATTTT 16 V_SP1_03_M02281 TRANSFAC + 149899472 149899481 7.0E-06 CCCCGCCCCC 10 V_GKLF_02_M01588 TRANSFAC - 149899740 149899751 8.0E-06 GCCCCGCCCACC 12 V_NKX24_01_M01350 TRANSFAC + 149900381 149900396 1.0E-06 AATTGCACTTGAATTT 16 V_SP1_02_M01303 TRANSFAC - 149899470 149899480 3.0E-06 GGGGCGGGGTG 11 V_AP4_Q6_02_M01860 TRANSFAC - 149900269 149900281 1.0E-06 TCAGCTGTGGTCA 13 V_CACCCBINDINGFACTOR_Q6_M00721 TRANSFAC + 149900234 149900249 7.0E-06 CATGGGGAGGGTGAGG 16 V_PU1_Q4_M01172 TRANSFAC + 149900410 149900428 6.0E-06 CAAACCCAGTTCCCCTATT 19 V_PU1_Q4_M01172 TRANSFAC + 149901290 149901308 1.0E-06 TAATTCTGTTTCCCCTTTC 19 V_SOX21_03_M02803 TRANSFAC + 149899984 149899999 6.0E-06 TTTTAATATATTTTGT 16 V_NR3C1_01_M02219 TRANSFAC + 149899967 149899984 6.0E-06 AAGAACAAAAATTTCAGT 18 V_ELF2_02_M02054 TRANSFAC - 149899713 149899722 8.0E-06 CCCGGAAGTG 10 V_ETS_Q4_M00771 TRANSFAC + 149903491 149903502 0.0E+00 ATTCACTTCCTG 12 V_SOX13_03_M02797 TRANSFAC + 149899965 149899980 1.0E-06 AAAAGAACAAAAATTT 16 V_GC_01_M00255 TRANSFAC - 149899469 149899482 7.0E-06 TGGGGGCGGGGTGG 14 V_SOX7_03_M02807 TRANSFAC + 149899963 149899984 8.0E-06 CTAAAAGAACAAAAATTTCAGT 22 V_MTERF_01_M01245 TRANSFAC + 149900149 149900162 6.0E-06 TGGAGGTATTTGGT 14 V_FOXA2_02_M02853 TRANSFAC + 149899964 149899978 8.0E-06 TAAAAGAACAAAAAT 15 V_PR_01_M00954 TRANSFAC - 149899962 149899988 9.0E-06 TAAAACTGAAATTTTTGTTCTTTTAGC 27 V_PR_01_M00954 TRANSFAC - 149900314 149900340 3.0E-06 CAGATGGGGCCAGAGTGTTCTAGAGAT 27 V_FKLF_Q5_M01837 TRANSFAC - 149899532 149899541 2.0E-06 GGGGTGGGAG 10 V_TCFAP2C_03_M02821 TRANSFAC + 149900163 149900177 1.0E-06 TTTCCCTCAGGGGAG 15 V_TCFAP2C_03_M02821 TRANSFAC - 149900163 149900177 7.0E-06 CTCCCCTGAGGGAAA 15 V_GFI1_01_M00250 TRANSFAC - 149899995 149900018 6.0E-06 AGAAGAAGAATCACTGTCCACAAA 24 V_NKX26_01_M01322 TRANSFAC + 149900381 149900396 6.0E-06 AATTGCACTTGAATTT 16 V_SOX7_04_M02911 TRANSFAC + 149900224 149900245 3.0E-06 GTCCTAATTGCATGGGGAGGGT 22 V_HOXA3_07_M02869 TRANSFAC - 149899984 149899997 1.0E-06 AAAATATATTAAAA 14 V_SP1_Q6_M00196 TRANSFAC - 149899470 149899482 3.0E-06 TGGGGGCGGGGTG 13 V_SP1_Q6_M00196 TRANSFAC + 149899740 149899752 3.0E-06 GGTGGGCGGGGCC 13 V_NKX22_02_M01372 TRANSFAC + 149900381 149900397 5.0E-06 AATTGCACTTGAATTTT 17 V_PAX5_01_M00143 TRANSFAC - 149900121 149900148 6.0E-06 GCCCAAATCAGGGTTGTGAGGCCAAATC 28 V_GADP_01_M01258 TRANSFAC + 149899713 149899724 2.0E-06 CACTTCCGGGGC 12 V_HOX13_01_M00023 TRANSFAC - 149900426 149900455 9.0E-06 AGGCATCCACCATATTATTGCTAAGGAAAT 30 V_REX1_03_M01744 TRANSFAC - 149899780 149899791 1.0E-06 AAGATGGCTGCA 12 V_GR_01_M00955 TRANSFAC - 149900314 149900340 0.0E+00 CAGATGGGGCCAGAGTGTTCTAGAGAT 27 V_AR_04_M01201 TRANSFAC - 149900320 149900334 3.0E-06 GGGCCAGAGTGTTCT 15 V_GR_Q6_M00192 TRANSFAC - 149899966 149899984 1.0E-05 ACTGAAATTTTTGTTCTTT 19 V_GR_Q6_M00192 TRANSFAC - 149900318 149900336 4.0E-06 TGGGGCCAGAGTGTTCTAG 19 V_SPIB_01_M01204 TRANSFAC - 149900413 149900429 6.0E-06 AAATAGGGGAACTGGGT 17 V_TEL2_Q6_M00678 TRANSFAC + 149903493 149903502 4.0E-06 TCACTTCCTG 10 V_PAX8_01_M00717 TRANSFAC + 149899398 149899412 7.0E-06 ATTTTTTGAGTGAGA 15 V_CDC5_01_M00478 TRANSFAC + 149899983 149899994 1.0E-06 GTTTTAATATAT 12 V_ISGF3G_03_M02771 TRANSFAC + 149899951 149899965 9.0E-06 TAAATTCGAAAGCTA 15 V_TEL1_01_M01993 TRANSFAC - 149899713 149899722 5.0E-06 CCCGGAAGTG 10 V_SP1_01_M00008 TRANSFAC - 149899471 149899480 3.0E-06 GGGGCGGGGT 10 V_TBP_06_M02814 TRANSFAC + 149899984 149899999 3.0E-06 TTTTAATATATTTTGT 16 V_TBP_06_M02814 TRANSFAC - 149899984 149899999 1.0E-06 ACAAAATATATTAAAA 16 V_SOX11_03_M02795 TRANSFAC + 149899965 149899981 3.0E-06 AAAAGAACAAAAATTTC 17 V_SOX11_03_M02795 TRANSFAC + 149903469 149903485 6.0E-06 GAGAAAACAAAGACCTT 17 V_ELF4_01_M01979 TRANSFAC - 149899713 149899722 4.0E-06 CCCGGAAGTG 10 V_FOXO1_Q5_M01216 TRANSFAC + 149903471 149903479 5.0E-06 GAAAACAAA 9 V_GR_Q6_02_M01836 TRANSFAC - 149899966 149899978 4.0E-06 ATTTTTGTTCTTT 13 V_SP4_Q5_M01273 TRANSFAC - 149899741 149899751 9.0E-06 GCCCCGCCCAC 11 V_GCNF_01_M00526 TRANSFAC - 149900382 149900399 3.0E-06 GCAAAATTCAAGTGCAAT 18 V_MTF1_06_M02882 TRANSFAC - 149899981 149899994 8.0E-06 ATATATTAAAACTG 14 V_NKX25_03_M01414 TRANSFAC + 149900381 149900396 0.0E+00 AATTGCACTTGAATTT 16 V_PXR_Q2_M00964 TRANSFAC - 149899143 149899154 1.0E-06 AAGGTTAGTGAA 12 V_MECP2_02_M01299 TRANSFAC + 149899426 149899435 9.0E-06 CCGGACTTAA 10 V_ZBTB12_03_M02824 TRANSFAC - 149900313 149900329 8.0E-06 AGAGTGTTCTAGAGATC 17 V_ETS1_B_M00339 TRANSFAC - 149903489 149903503 8.0E-06 CCAGGAAGTGAATCA 15 V_ZFP281_01_M01597 TRANSFAC - 149899472 149899482 6.0E-06 TGGGGGCGGGG 11 V_IRF1_Q6_01_M01881 TRANSFAC + 149899975 149899988 0.0E+00 AAATTTCAGTTTTA 14 V_SOX8_03_M02808 TRANSFAC - 149899965 149899981 1.0E-05 GAAATTTTTGTTCTTTT 17 V_TCFAP2A_03_M02819 TRANSFAC + 149900163 149900177 0.0E+00 TTTCCCTCAGGGGAG 15 V_TCFAP2A_03_M02819 TRANSFAC - 149900163 149900177 9.0E-06 CTCCCCTGAGGGAAA 15 V_SRF_06_M02916 TRANSFAC + 149899962 149899978 8.0E-06 GCTAAAAGAACAAAAAT 17 V_SATB1_01_M01232 TRANSFAC + 149900430 149900441 9.0E-06 CCTTAGCAATAA 12 V_PR_02_M00957 TRANSFAC - 149899962 149899988 7.0E-06 TAAAACTGAAATTTTTGTTCTTTTAGC 27 V_PR_02_M00957 TRANSFAC - 149900314 149900340 5.0E-06 CAGATGGGGCCAGAGTGTTCTAGAGAT 27 V_ELF_02_M02053 TRANSFAC - 149899713 149899722 1.0E-05 CCCGGAAGTG 10 V_SOX12_03_M02796 TRANSFAC - 149899964 149899977 3.0E-06 TTTTTGTTCTTTTA 14 V_SP1_Q2_01_M00933 TRANSFAC + 149899472 149899481 4.0E-06 CCCCGCCCCC 10 V_ELF5_04_M02241 TRANSFAC + 149900425 149900433 2.0E-06 TATTTCCTT 9 V_SP1_Q4_01_M00932 TRANSFAC - 149899470 149899482 9.0E-06 TGGGGGCGGGGTG 13 V_SP1_Q4_01_M00932 TRANSFAC + 149899740 149899752 2.0E-06 GGTGGGCGGGGCC 13 V_HOXD10_01_M01375 TRANSFAC - 149899979 149899995 1.0E-06 AATATATTAAAACTGAA 17 V_ATF_B_M00338 TRANSFAC + 149900204 149900215 5.0E-06 GTGACGTCTGCG 12 V_BRCA_01_M01082 TRANSFAC + 149900015 149900022 1.0E-05 TTCTGTTG 8 V_SMAD1_01_M01590 TRANSFAC + 149903471 149903482 8.0E-06 GAAAACAAAGAC 12 V_NANOG_02_M01247 TRANSFAC + 149899963 149899982 7.0E-06 CTAAAAGAACAAAAATTTCA 20 V_T3RALPHA_Q6_M01724 TRANSFAC - 149899694 149899704 3.0E-06 GCTGAGGTCAG 11 V_NKX21_01_M01312 TRANSFAC + 149900381 149900396 4.0E-06 AATTGCACTTGAATTT 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.