Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

SLC35B1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 10237 solute carrier family 35, member B1 chr17 - 47784782 - 47790282 47785282 Transcription Factor Binding Sites   Download all TFBS in the SLC35B1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints EVX2_homeodomain_DBD_monomeric_10_1 SELEX + 47785927 47785936 4.0E-06 GATAATTAGT 10 ESRRA_nuclearreceptor_DBD_dimeric_19_1 SELEX + 47781475 47781493 2.0E-06 CAATGTCGACCAAAGGTTG 19 VSX2_homeodomain_DBD_monomeric_8_1 SELEX - 47785928 47785935 5.0E-06 CTAATTAT 8 DLX1_homeodomain_DBD_monomeric_10_1 SELEX - 47785927 47785936 1.0E-06 ACTAATTATC 10 EVX1_homeodomain_DBD_monomeric_10_1 SELEX - 47785927 47785936 7.0E-06 ACTAATTATC 10 MEF2D_MADS_DBD_dimeric_12_1 SELEX - 47786021 47786032 9.0E-06 ACTAATAATACC 12 PDX1_homeodomain_DBD_dimeric_18_1 SELEX + 47785918 47785935 6.0E-06 GAAACTAGGGATAATTAG 18 ZNF435_C2H2_full_dimeric_18_1 SELEX - 47785981 47785998 4.0E-06 ACAGTTTACAAAACACTC 18 TFAP2B_TFAP_DBD_dimeric_11_1 SELEX + 47786382 47786392 0.0E+00 AGCCTCAGGCA 11 TFAP2B_TFAP_DBD_dimeric_11_1 SELEX - 47786382 47786392 6.0E-06 TGCCTGAGGCT 11 ESX1_homeodomain_full_monomeric_10_1 SELEX - 47785927 47785936 7.0E-06 ACTAATTATC 10 TFAP2A_TFAP_DBD_dimeric_11_1 SELEX + 47786382 47786392 0.0E+00 AGCCTCAGGCA 11 TFAP2A_TFAP_DBD_dimeric_11_1 SELEX - 47786382 47786392 8.0E-06 TGCCTGAGGCT 11 MSX1_homeodomain_full_monomeric_8_1 SELEX - 47786293 47786300 7.0E-06 CCAATTAA 8 MSX2_homeodomain_DBD_monomeric_8_1 SELEX - 47786293 47786300 7.0E-06 CCAATTAA 8 RARG_nuclearreceptor_full_dimeric_18_1 SELEX + 47781476 47781493 1.0E-05 AATGTCGACCAAAGGTTG 18 LEF1_HMG_DBD_monomeric_15_1 SELEX + 47781392 47781406 5.0E-06 AGGGATCAAAAGGAT 15 MEF2B_MADS_full_dimeric_12_1 SELEX - 47786021 47786032 5.0E-06 ACTAATAATACC 12 ESRRG_nuclearreceptor_full_dimeric_18_1 SELEX + 47781476 47781493 6.0E-06 AATGTCGACCAAAGGTTG 18 Hoxa2_homeodomain_DBD_monomeric_10_1 SELEX - 47785927 47785936 5.0E-06 ACTAATTATC 10 ESR1_MA0112.2 JASPAR + 47781403 47781422 3.0E-06 GGATGAGGGCAGCCTGCCCT 20 MEOX2_homeodomain_DBD_monomeric_10_1 SELEX - 47785927 47785936 9.0E-06 ACTAATTATC 10 HESX1_homeodomain_DBD_monomeric_10_1 SELEX + 47785927 47785936 6.0E-06 GATAATTAGT 10 BSX_homeodomain_DBD_monomeric_8_1 SELEX - 47786293 47786300 7.0E-06 CCAATTAA 8 LHX2_homeodomain_DBD_monomeric_10_1 SELEX - 47785927 47785936 7.0E-06 ACTAATTATC 10 HESX1_homeodomain_DBD_dimeric_15_1 SELEX + 47785928 47785942 4.0E-06 ATAATTAGTAATAGC 15 Msx3_homeodomain_DBD_monomeric_8_1 SELEX - 47786293 47786300 7.0E-06 CCAATTAA 8 TFAP2C_TFAP_full_dimeric_11_1 SELEX + 47786382 47786392 0.0E+00 AGCCTCAGGCA 11 TFAP2C_TFAP_full_dimeric_11_1 SELEX - 47786382 47786392 4.0E-06 TGCCTGAGGCT 11 MEOX1_homeodomain_full_monomeric_10_1 SELEX - 47785927 47785936 1.0E-06 ACTAATTATC 10 NFIA_NFI_full_monomeric_10_1 SELEX + 47785723 47785732 9.0E-06 AATGCCAAAT 10 NFIA_NFI_full_monomeric_10_1 SELEX - 47786373 47786382 9.0E-06 TGTGCCAAAA 10 Tcfap2a_TFAP_DBD_dimeric_11_1 SELEX + 47786382 47786392 1.0E-06 AGCCTCAGGCA 11 Tcfap2a_TFAP_DBD_dimeric_11_1 SELEX - 47786382 47786392 6.0E-06 TGCCTGAGGCT 11 ZIC1_C2H2_full_monomeric_14_1 SELEX - 47785544 47785557 8.0E-06 GACACCCTGTGGTG 14 V_NFAT_Q4_01_M00935 TRANSFAC - 47785501 47785510 7.0E-06 TTGGAAAAAT 10 V_E2A_Q6_01_M02088 TRANSFAC + 47786312 47786324 1.0E-05 GGCCACCTGGTGG 13 V_BCL6_Q3_01_M02085 TRANSFAC + 47785408 47785417 4.0E-06 CTTCCTAGGA 10 V_ESR1_01_M02261 TRANSFAC + 47781403 47781422 3.0E-06 GGATGAGGGCAGCCTGCCCT 20 V_FOXJ2_02_M00423 TRANSFAC - 47786018 47786031 4.0E-06 CTAATAATACCTTA 14 V_MEF2_02_M00231 TRANSFAC + 47785108 47785129 1.0E-06 TCCCATAGTAAAAATAGCAGAC 22 V_ZTA_Q2_M00711 TRANSFAC - 47785895 47785907 3.0E-06 AAACTCTGGCTCA 13 V_GBX2_01_M01382 TRANSFAC + 47785924 47785940 5.0E-06 AGGGATAATTAGTAATA 17 V_NKX25_Q6_M02108 TRANSFAC + 47785853 47785863 1.0E-05 GTCACTTAAAG 11 V_HOXA4_01_M01370 TRANSFAC - 47785924 47785940 4.0E-06 TATTACTAATTATCCCT 17 V_CEBP_01_M00159 TRANSFAC + 47781520 47781532 3.0E-06 TGTTTGGTAATGA 13 V_P50RELAP65_Q5_01_M01224 TRANSFAC - 47785379 47785390 1.0E-05 GGAGTTTCCCCC 12 V_GKLF_02_M01588 TRANSFAC + 47786415 47786426 1.0E-06 ACCACACCCATC 12 V_VAX2_01_M01327 TRANSFAC - 47785925 47785940 6.0E-06 TATTACTAATTATCCC 16 V_AIRE_02_M01000 TRANSFAC - 47786159 47786183 4.0E-06 GCTCATTAATGGGAAATATTCAGGA 25 V_PU1_Q4_M01172 TRANSFAC + 47786052 47786070 6.0E-06 TGATCTTATTTCCTCACAT 19 V_ATF4_Q2_M00514 TRANSFAC + 47786435 47786446 5.0E-06 CCTGACTCAATA 12 V_EVX1_01_M01475 TRANSFAC + 47785924 47785940 9.0E-06 AGGGATAATTAGTAATA 17 V_PAX7_01_M01339 TRANSFAC - 47785923 47785939 9.0E-06 ATTACTAATTATCCCTA 17 V_PAX7_01_M01339 TRANSFAC + 47785924 47785940 5.0E-06 AGGGATAATTAGTAATA 17 V_VSX1_01_M01335 TRANSFAC + 47785924 47785940 7.0E-06 AGGGATAATTAGTAATA 17 V_CDP_04_M01344 TRANSFAC + 47785923 47785937 5.0E-06 TAGGGATAATTAGTA 15 V_BARBIE_01_M00238 TRANSFAC + 47781396 47781410 0.0E+00 ATCAAAAGGATGAGG 15 V_TBX18_01_M01262 TRANSFAC + 47786073 47786091 6.0E-06 AGGGGTGGAAATGGAAGCT 19 V_TCFAP2C_03_M02821 TRANSFAC + 47786380 47786394 2.0E-06 ACAGCCTCAGGCAAA 15 V_NFAT_Q6_M00302 TRANSFAC - 47785501 47785512 8.0E-06 GATTGGAAAAAT 12 V_HOXA3_02_M01337 TRANSFAC + 47785923 47785936 6.0E-06 TAGGGATAATTAGT 14 V_RSRFC4_Q2_M00407 TRANSFAC + 47785112 47785128 2.0E-06 ATAGTAAAAATAGCAGA 17 V_AMEF2_Q6_M00403 TRANSFAC - 47786018 47786035 7.0E-06 ATGACTAATAATACCTTA 18 V_NKX25_02_M00241 TRANSFAC + 47786292 47786299 7.0E-06 CTTAATTG 8 V_PMX2A_01_M01444 TRANSFAC - 47785925 47785940 1.0E-05 TATTACTAATTATCCC 16 V_PAX4_05_M01385 TRANSFAC - 47785923 47785939 8.0E-06 ATTACTAATTATCCCTA 17 V_MATH1_Q2_M01716 TRANSFAC + 47786314 47786323 9.0E-06 CCACCTGGTG 10 V_CUX1_04_M02959 TRANSFAC + 47785923 47785937 5.0E-06 TAGGGATAATTAGTA 15 V_JUNDM2_04_M02876 TRANSFAC + 47786023 47786038 6.0E-06 TATTATTAGTCATCAC 16 V_JUNDM2_04_M02876 TRANSFAC - 47786024 47786039 5.0E-06 AGTGATGACTAATAAT 16 V_HOX13_01_M00023 TRANSFAC - 47785567 47785596 5.0E-06 ATCCTTATACGTCATTATTCTACGCCCAGG 30 V_OCT1_08_M01354 TRANSFAC + 47785923 47785938 1.0E-05 TAGGGATAATTAGTAA 16 V_MEF2_04_M00233 TRANSFAC + 47785108 47785129 8.0E-06 TCCCATAGTAAAAATAGCAGAC 22 V_MEF2_Q6_01_M00941 TRANSFAC - 47785115 47785126 2.0E-06 TGCTATTTTTAC 12 V_CTCF_02_M01259 TRANSFAC - 47781416 47781435 3.0E-06 CATGTATCACCAGAGGGCAG 20 V_ATF1_04_M02842 TRANSFAC + 47785580 47785593 2.0E-06 TAATGACGTATAAG 14 V_OCT4_02_M01124 TRANSFAC + 47786199 47786213 1.0E-05 TTCCTCATGCAAGTG 15 V_PTF1BETA_Q6_M00657 TRANSFAC + 47785461 47785474 7.0E-06 GGGGAACCGGCAGC 14 V_PTF1BETA_Q6_M00657 TRANSFAC - 47785495 47785508 8.0E-06 GGAAAAATCTCCAG 14 V_EN2_01_M01455 TRANSFAC + 47785924 47785940 7.0E-06 AGGGATAATTAGTAATA 17 V_ZFP105_04_M02931 TRANSFAC + 47786436 47786452 7.0E-06 CTGACTCAATAAGGCTT 17 V_S8_01_M00099 TRANSFAC - 47785925 47785940 7.0E-06 TATTACTAATTATCCC 16 V_TTF1_Q5_M02034 TRANSFAC - 47781320 47781333 1.0E-06 AAGCCCTTGAGAAA 14 V_FOXL1_02_M02857 TRANSFAC + 47786113 47786128 1.0E-05 AAGTCTTAACAACTCA 16 V_MSX2_01_M01393 TRANSFAC - 47785924 47785940 3.0E-06 TATTACTAATTATCCCT 17 V_NANOG_01_M01123 TRANSFAC - 47781525 47781536 5.0E-06 GGGCTCATTACC 12 V_GATA3_01_M00077 TRANSFAC + 47786497 47786505 7.0E-06 AAGATAGGG 9 V_MSX1_02_M01412 TRANSFAC - 47785925 47785940 7.0E-06 TATTACTAATTATCCC 16 V_RSRFC4_01_M00026 TRANSFAC - 47785112 47785127 2.0E-06 CTGCTATTTTTACTAT 16 V_HOXC5_01_M01454 TRANSFAC + 47785924 47785940 7.0E-06 AGGGATAATTAGTAATA 17 V_TCFAP2B_04_M02924 TRANSFAC - 47786380 47786394 2.0E-06 TTTGCCTGAGGCTGT 15 V_TCFAP2A_03_M02819 TRANSFAC + 47786380 47786394 3.0E-06 ACAGCCTCAGGCAAA 15 V_HB9_01_M01349 TRANSFAC + 47785925 47785940 4.0E-06 GGGATAATTAGTAATA 16 V_SATB1_01_M01232 TRANSFAC - 47785929 47785940 2.0E-06 TATTACTAATTA 12 V_SATB1_01_M01232 TRANSFAC + 47786026 47786037 8.0E-06 TATTAGTCATCA 12 V_HOXB3_01_M01330 TRANSFAC + 47785924 47785940 4.0E-06 AGGGATAATTAGTAATA 17 V_S8_02_M01376 TRANSFAC + 47785924 47785940 7.0E-06 AGGGATAATTAGTAATA 17 V_MEF2A_05_M01301 TRANSFAC + 47786020 47786031 3.0E-06 AGGTATTATTAG 12 V_AP2ALPHA_02_M01045 TRANSFAC - 47786380 47786394 1.0E-05 TTTGCCTGAGGCTGT 15 V_HMEF2_Q6_M00406 TRANSFAC - 47786018 47786033 4.0E-06 GACTAATAATACCTTA 16 V_DLX1_01_M01439 TRANSFAC + 47785923 47785936 6.0E-06 TAGGGATAATTAGT 14 V_AP2ALPHA_03_M01047 TRANSFAC + 47786380 47786394 3.0E-06 ACAGCCTCAGGCAAA 15 V_AP2ALPHA_03_M01047 TRANSFAC - 47786380 47786394 3.0E-06 TTTGCCTGAGGCTGT 15 V_TCFAP2E_03_M02822 TRANSFAC + 47786380 47786394 0.0E+00 ACAGCCTCAGGCAAA 15 V_TCFAP2E_03_M02822 TRANSFAC - 47786380 47786394 2.0E-06 TTTGCCTGAGGCTGT 15 V_GBX1_01_M01371 TRANSFAC - 47785924 47785940 5.0E-06 TATTACTAATTATCCCT 17 V_AR_Q2_M00447 TRANSFAC + 47781486 47781500 5.0E-06 AAAGGTTGATGTTCA 15 V_HOXA4_Q2_M00640 TRANSFAC + 47785928 47785935 5.0E-06 ATAATTAG 8

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.