Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

MSLN


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
10232 mesothelin chr16 +805764 - 811572 811072

Transcription Factor Binding Sites

 
Download all TFBS in the MSLN promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
PITX3_homeodomain_DBD_monomeric_9_1 SELEX + 809826 809834 5.0E-06 CTTAATCCC 9
BARX1_homeodomain_DBD_dimeric_17_1 SELEX - 807997 808013 7.0E-06 AAACTATAAAACCATTA 17
Pax4_MA0068.1 JASPAR - 809761 809790 5.0E-06 GAAAAATTCCAGACACTCTTGTAGCAAACC 30
PITX1_homeodomain_full_monomeric_8_1 SELEX + 809827 809834 1.0E-05 TTAATCCC 8
TCF7L1_HMG_full_monomeric_12_1 SELEX - 809558 809569 8.0E-06 AAAGGCCAAAGG 12
TCF7L1_HMG_full_monomeric_12_1 SELEX - 811186 811197 3.0E-06 AGAGCTCAAAGG 12
NR4A2_nuclearreceptor_full_dimeric_16_1 SELEX + 809839 809854 6.0E-06 TGACATTTGTAAGTTG 16
FOXG1_forkhead_DBD_putatively-multimeric_12_1 SELEX + 809656 809667 8.0E-06 GTGGACACAAAG 12
RHOXF1_homeodomain_full_monomeric_8_1 SELEX + 809827 809834 1.0E-05 TTAATCCC 8
ERF_ETS_DBD_monomeric_10_1 SELEX - 807665 807674 1.0E-05 ACAGGAAGTA 10
GSC_homeodomain_full_monomeric_10_1 SELEX + 809826 809835 4.0E-06 CTTAATCCCT 10
HNF4A_MA0114.1 JASPAR - 809562 809574 5.0E-06 CGGCCAAAGGCCA 13
GSC2_homeodomain_DBD_monomeric_10_1 SELEX + 809826 809835 7.0E-06 CTTAATCCCT 10
ELF5_MA0136.1 JASPAR + 807987 807995 5.0E-06 AATTTCCTT 9
FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 807871 807883 1.0E-06 AAGAAAATAAAGA 13
TEAD1_MA0090.1 JASPAR + 810682 810693 1.0E-06 CACATTCCTGGG 12
Zfx_MA0146.1 JASPAR - 810632 810645 4.0E-06 GCGGGCCAGGCCTG 14
V_OBOX6_01_M01445 TRANSFAC - 809825 809839 9.0E-06 AAGAAGGGATTAAGG 15
V_HSF1_Q6_M01023 TRANSFAC + 807691 807707 4.0E-06 ACTCTGGACGTTTCATC 17
V_ZFX_01_M01593 TRANSFAC + 810629 810644 6.0E-06 CCCCAGGCCTGGCCCG 16
V_HMGIY_Q3_M01010 TRANSFAC + 809778 809792 1.0E-05 TCTGGAATTTTTCAG 15
V_ETS_B_M00340 TRANSFAC - 807972 807985 1.0E-06 AAGAGGAAGTGTTT 14
V_SPIB_02_M02041 TRANSFAC - 807665 807674 3.0E-06 ACAGGAAGTA 10
V_EAR2_Q2_M01728 TRANSFAC + 809555 809568 1.0E-06 TTTCCTTTGGCCTT 14
V_AP2_Q6_01_M00915 TRANSFAC + 810625 810637 6.0E-06 CCTCCCCCAGGCC 13
V_HNF4A_03_M02220 TRANSFAC - 809562 809574 5.0E-06 CGGCCAAAGGCCA 13
V_NKX24_01_M01350 TRANSFAC + 807976 807991 1.0E-05 ACTTCCTCTTGAATTT 16
V_PU1_Q4_M01172 TRANSFAC + 807659 807677 1.0E-06 CTCATCTACTTCCTGTCTC 19
V_ETS_Q4_M00771 TRANSFAC + 807662 807673 1.0E-06 ATCTACTTCCTG 12
V_ETS_Q4_M00771 TRANSFAC + 807972 807983 6.0E-06 AAACACTTCCTC 12
V_SPIC_01_M02042 TRANSFAC - 807665 807674 4.0E-06 ACAGGAAGTA 10
V_SPI1_03_M02078 TRANSFAC - 807975 807984 1.0E-06 AGAGGAAGTG 10
V_FLI1_02_M02073 TRANSFAC - 807665 807674 9.0E-06 ACAGGAAGTA 10
Hand1_Tcfe2a_MA0092.1 JASPAR + 809776 809785 7.0E-06 TGTCTGGAAT 10
V_HOXA3_07_M02869 TRANSFAC - 807994 808007 5.0E-06 TAAAACCATTAGAA 14
V_RXRA_04_M02895 TRANSFAC - 811179 811194 7.0E-06 GCTCAAAGGTTGTTAC 16
V_PPARG_03_M00528 TRANSFAC - 809562 809578 9.0E-06 TTCCCGGCCAAAGGCCA 17
V_MEF2_04_M00233 TRANSFAC + 807670 807691 7.0E-06 CCTGTCTCTCTAAATTGACCCA 22
V_TEL2_Q6_M00678 TRANSFAC + 807664 807673 1.0E-06 CTACTTCCTG 10
V_TEF_01_M01305 TRANSFAC + 810682 810693 1.0E-06 CACATTCCTGGG 12
V_CETS1P54_01_M00032 TRANSFAC - 807665 807674 1.0E-06 ACAGGAAGTA 10
V_HNF4A_Q6_01_M02016 TRANSFAC - 809559 809573 1.0E-06 GGCCAAAGGCCAAAG 15
V_HNF4_DR1_Q3_M00764 TRANSFAC + 809562 809574 9.0E-06 TGGCCTTTGGCCG 13
V_VMYB_01_M00003 TRANSFAC - 809788 809797 7.0E-06 AACAACTGAA 10
V_GATA4_Q3_M00632 TRANSFAC - 807925 807936 4.0E-06 AGAAAGAAGGCA 12
V_OTX2_Q3_M01719 TRANSFAC - 809825 809837 4.0E-06 GAAGGGATTAAGG 13
V_HAND1E47_01_M00222 TRANSFAC + 809771 809786 0.0E+00 AAGAGTGTCTGGAATT 16
V_MAZR_01_M00491 TRANSFAC - 809732 809744 4.0E-06 TGGGGAGGGGACA 13
V_AP3_Q6_M00690 TRANSFAC + 807678 807685 5.0E-06 TCTAAATT 8
V_NKX25_03_M01414 TRANSFAC + 807976 807991 8.0E-06 ACTTCCTCTTGAATTT 16
V_PLAG1_01_M01778 TRANSFAC - 810708 810723 8.0E-06 GGGGCAGCAGGGAGTG 16
V_HNF4_Q6_01_M01031 TRANSFAC - 809561 809574 2.0E-06 CGGCCAAAGGCCAA 14
V_TEF1_Q6_03_M01817 TRANSFAC - 810683 810691 9.0E-06 CAGGAATGT 9
V_SMAD3_03_M02794 TRANSFAC - 809771 809787 6.0E-06 AAATTCCAGACACTCTT 17
V_DOBOX5_01_M01463 TRANSFAC - 809822 809838 1.0E-05 AGAAGGGATTAAGGGCC 17
V_OTX2_01_M01387 TRANSFAC - 809822 809838 8.0E-06 AGAAGGGATTAAGGGCC 17
V_SPIC_02_M02077 TRANSFAC - 807975 807984 3.0E-06 AGAGGAAGTG 10
V_ETS1_B_M00339 TRANSFAC - 807660 807674 6.0E-06 ACAGGAAGTAGATGA 15
V_ETS1_B_M00339 TRANSFAC - 807970 807984 6.0E-06 AGAGGAAGTGTTTGT 15
V_CETS1_02_M02063 TRANSFAC - 807665 807674 9.0E-06 ACAGGAAGTA 10
V_SOX15_04_M02903 TRANSFAC - 807984 807998 9.0E-06 TAGAAGGAAATTCAA 15
V_ELF5_04_M02241 TRANSFAC + 807987 807995 5.0E-06 AATTTCCTT 9
V_TAACC_B_M00331 TRANSFAC - 807857 807879 5.0E-06 AAATAAAGAGCCAAGCCACAGAA 23
V_OBOX6_02_M03068 TRANSFAC - 809825 809839 9.0E-06 AAGAAGGGATTAAGG 15
V_PAX4_04_M00380 TRANSFAC + 807577 807606 1.0E-05 AAAAAGAAAAGGAAAGAAACTCCATACCCC 30
V_SPI1_02_M02043 TRANSFAC - 807665 807674 4.0E-06 ACAGGAAGTA 10
V_SPIB_03_M02076 TRANSFAC - 807975 807984 3.0E-06 AGAGGAAGTG 10
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL