Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

CTDSPL


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
10217 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like chr3 +37898668 - 37904168 37903668

Transcription Factor Binding Sites

 
Download all TFBS in the CTDSPL promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
Sox17_MA0078.1 JASPAR - 37904516 37904524 7.0E-06 CTCATTGTC 9
Egr1_MA0162.1 JASPAR + 37903885 37903895 3.0E-06 TGCGTGGGTGT 11
THRB_nuclearreceptor_DBD_dimeric_20_1 SELEX - 37905035 37905054 8.0E-06 CTGACCTCAGTCCAGGTGTT 20
SP3_C2H2_DBD_monomeric_11_1 SELEX - 37903888 37903898 6.0E-06 CCCACACCCAC 11
NR4A2_nuclearreceptor_full_monomeric_11_1 SELEX + 37904702 37904712 3.0E-06 TTTAAAGGGCA 11
HNF1B_MA0153.1 JASPAR - 37900985 37900996 2.0E-06 TCACTGATTAAC 12
EWSR1-FLI1_MA0149.1 JASPAR - 37903295 37903312 6.0E-06 GGAGGGAAAGAAGAAGGG 18
EWSR1-FLI1_MA0149.1 JASPAR - 37903299 37903316 3.0E-06 GAAGGGAGGGAAAGAAGA 18
EWSR1-FLI1_MA0149.1 JASPAR - 37903304 37903321 1.0E-06 GAAAGGAAGGGAGGGAAA 18
EWSR1-FLI1_MA0149.1 JASPAR - 37903308 37903325 5.0E-06 AGGAGAAAGGAAGGGAGG 18
EWSR1-FLI1_MA0149.1 JASPAR - 37903312 37903329 1.0E-06 GGGAAGGAGAAAGGAAGG 18
EWSR1-FLI1_MA0149.1 JASPAR - 37903319 37903336 8.0E-06 AGAGGGAGGGAAGGAGAA 18
EWSR1-FLI1_MA0149.1 JASPAR - 37903323 37903340 1.0E-06 GGAGAGAGGGAGGGAAGG 18
EGR1_C2H2_full_monomeric_14_1 SELEX - 37903883 37903896 7.0E-06 CACACCCACGCACC 14
SRF_MA0083.1 JASPAR + 37900955 37900966 5.0E-06 TCCCAAATAAGG 12
SRF_MA0083.1 JASPAR - 37900957 37900968 6.0E-06 TCCCTTATTTGG 12
TEAD1_TEA_full_monomeric_10_1 SELEX - 37904279 37904288 5.0E-06 CACATTCCAC 10
Egr1_C2H2_mouse-DBD_mutant_DBD_monomeric_16_1 SELEX - 37903882 37903897 7.0E-06 CCACACCCACGCACCC 16
FIGLA_bHLH_DBD_dimeric_10_1 SELEX + 37905035 37905044 9.0E-06 AACACCTGGA 10
HNF1A_homeodomain_full_dimeric_15_1 SELEX + 37900984 37900998 3.0E-06 TGTTAATCAGTGACT 15
HNF1A_homeodomain_full_dimeric_15_1 SELEX - 37900984 37900998 1.0E-06 AGTCACTGATTAACA 15
EGR2_C2H2_full_monomeric_15_1 SELEX - 37903883 37903897 4.0E-06 CCACACCCACGCACC 15
NR4A2_nuclearreceptor_full_dimeric_16_1 SELEX - 37904697 37904712 7.0E-06 TGCCCTTTAAAGCTGG 16
SP1_MA0079.2 JASPAR + 37902122 37902131 7.0E-06 CCCCGCCCCC 10
SP1_MA0079.2 JASPAR - 37903857 37903866 3.0E-06 CCCCTCCCCC 10
HIC2_C2H2_DBD_monomeric_9_1 SELEX + 37902384 37902392 4.0E-06 ATGCCCACT 9
FOXI1_MA0042.1 JASPAR + 37904538 37904549 8.0E-06 GTGTGTTTAGTT 12
SP1_C2H2_DBD_monomeric_11_1 SELEX + 37902121 37902131 4.0E-06 ACCCCGCCCCC 11
Mycn_MA0104.2 JASPAR - 37906582 37906591 3.0E-06 ACCACGTGGC 10
ZSCAN4_C2H2_full_monomeric_15_1 SELEX - 37904080 37904094 4.0E-06 TGCACACACTTAGAA 15
ZSCAN4_C2H2_full_monomeric_15_1 SELEX + 37904109 37904123 1.0E-06 TGCACACGCGGACAG 15
HNF1B_homeodomain_full_dimeric_13_1 SELEX + 37900985 37900997 2.0E-06 GTTAATCAGTGAC 13
HNF1B_homeodomain_full_dimeric_13_1 SELEX - 37900985 37900997 4.0E-06 GTCACTGATTAAC 13
TEAD3_TEA_DBD_monomeric_8_1 SELEX - 37904280 37904287 1.0E-05 ACATTCCA 8
SRF_MADS_full_dimeric_16_1 SELEX + 37900954 37900969 4.0E-06 CTCCCAAATAAGGGAT 16
CREB3L1_bZIP_full_dimeric_12_1 SELEX + 37906581 37906592 5.0E-06 TGCCACGTGGTG 12
CREB3L1_bZIP_full_dimeric_12_1 SELEX - 37906581 37906592 1.0E-05 CACCACGTGGCA 12
NR3C1_MA0113.1 JASPAR - 37904941 37904958 2.0E-06 CAAAACAGTCTGTCCAAG 18
FOXO3_forkhead_full_putatively-multimeric_11_1 SELEX - 37901871 37901881 9.0E-06 CTTCCCCACAT 11
EGR2_C2H2_DBD_monomeric_11_1 SELEX - 37903885 37903895 4.0E-06 ACACCCACGCA 11
TEAD4_TEA_DBD_monomeric_10_1 SELEX - 37904279 37904288 4.0E-06 CACATTCCAC 10
RUNX1_MA0002.2 JASPAR - 37901914 37901924 8.0E-06 TTCTGTGGCTT 11
ETV6_ETS_full_dimeric_15_1 SELEX - 37903389 37903403 6.0E-06 CTGGAAGCGGGAGCG 15
HNF1B_homeodomain_full_dimeric_15_1 SELEX + 37900984 37900998 3.0E-06 TGTTAATCAGTGACT 15
HNF1B_homeodomain_full_dimeric_15_1 SELEX - 37900984 37900998 1.0E-06 AGTCACTGATTAACA 15
ELF5_MA0136.1 JASPAR - 37906520 37906528 4.0E-06 TACTTCCTT 9
Sox2_MA0143.1 JASPAR + 37904980 37904994 4.0E-06 CTTTTGTTCTGGTGA 15
TBX1_TBX_DBD_dimeric_20_1 SELEX + 37904347 37904366 9.0E-06 GAGTGTGTATGATTGTGTGA 20
RREB1_MA0073.1 JASPAR - 37904226 37904245 1.0E-06 ACACACAACACAAACTCACA 20
V_SRF_Q6_M00186 TRANSFAC + 37900955 37900968 2.0E-06 TCCCAAATAAGGGA 14
V_ZSCAN4_03_M02838 TRANSFAC - 37904084 37904100 1.0E-06 TACAAGTGCACACACTT 17
V_ZSCAN4_03_M02838 TRANSFAC - 37904102 37904118 3.0E-06 CGCGTGTGCACACACAC 17
V_ZSCAN4_03_M02838 TRANSFAC - 37904137 37904153 2.0E-06 GTGAGGTGCACACATAT 17
V_FXR_Q3_M00631 TRANSFAC + 37906556 37906569 9.0E-06 CAAGTTGAATTACT 14
V_E2F4_Q6_M02090 TRANSFAC - 37903334 37903343 1.0E-05 GCGGGAGAGA 10
V_SOX14_05_M02902 TRANSFAC + 37904512 37904526 7.0E-06 ATCAGACAATGAGGC 15
V_BCL6_01_M01183 TRANSFAC + 37901790 37901805 5.0E-06 TGTCCTTTAATACTTT 16
V_GM397_03_M02760 TRANSFAC - 37904084 37904100 1.0E-06 TACAAGTGCACACACTT 17
V_GM397_03_M02760 TRANSFAC - 37904102 37904118 8.0E-06 CGCGTGTGCACACACAC 17
V_SPIB_02_M02041 TRANSFAC + 37906519 37906528 4.0E-06 AAAGGAAGTA 10
V_STAT_Q6_M00777 TRANSFAC + 37905521 37905533 8.0E-06 GTTAGTTCTTGGA 13
V_IK_Q5_M01169 TRANSFAC - 37900952 37900961 3.0E-06 TTTGGGAGGT 10
V_SP1_Q6_01_M00931 TRANSFAC - 37902121 37902130 7.0E-06 GGGGCGGGGT 10
V_ZTA_Q2_M00711 TRANSFAC - 37903943 37903955 3.0E-06 TCACACTGGCTCA 13
V_NR2F2_03_M02783 TRANSFAC + 37904955 37904970 9.0E-06 TTTGAAGGGTCAAGGA 16
V_NFAT3_Q3_M01734 TRANSFAC + 37904209 37904218 6.0E-06 TTTTTTTCCT 10
V_AP2_Q6_01_M00915 TRANSFAC - 37903852 37903864 6.0E-06 CCTCCCCCAGGCC 13
V_SP1_03_M02281 TRANSFAC + 37902122 37902131 7.0E-06 CCCCGCCCCC 10
V_SP1_03_M02281 TRANSFAC - 37903857 37903866 3.0E-06 CCCCTCCCCC 10
V_EGR1_02_M01972 TRANSFAC + 37903885 37903895 2.0E-06 TGCGTGGGTGT 11
V_COUPTF_Q6_M01036 TRANSFAC + 37902003 37902025 3.0E-06 CCCACTGAACCCTGCCCACCGAC 23
V_PU1_Q4_M01172 TRANSFAC - 37901871 37901889 7.0E-06 CTTTCTCACTTCCCCACAT 19
V_LYF1_01_M00141 TRANSFAC - 37900953 37900961 9.0E-06 TTTGGGAGG 9
V_GM497_04_M02864 TRANSFAC - 37904490 37904505 8.0E-06 GAAGGCACACACATCT 16
V_CMYC_02_M01154 TRANSFAC + 37906581 37906592 9.0E-06 TGCCACGTGGTG 12
V_NR3C1_01_M02219 TRANSFAC - 37904941 37904958 2.0E-06 CAAAACAGTCTGTCCAAG 18
V_TCFAP2E_04_M02926 TRANSFAC - 37904208 37904221 8.0E-06 GTCAGGAAAAAAAG 14
V_PAX_Q6_M00808 TRANSFAC + 37904909 37904919 1.0E-05 CTGGAACTTTC 11
V_HNF1_C_M00206 TRANSFAC + 37900984 37901000 4.0E-06 TGTTAATCAGTGACTCC 17
V_SPIC_01_M02042 TRANSFAC + 37906519 37906528 4.0E-06 AAAGGAAGTA 10
V_EGR1_01_M00243 TRANSFAC + 37903884 37903895 8.0E-06 GTGCGTGGGTGT 12
V_RUNX1_01_M02257 TRANSFAC - 37901914 37901924 8.0E-06 TTCTGTGGCTT 11
V_RXRA_03_M02791 TRANSFAC - 37904955 37904971 1.0E-05 TTCCTTGACCCTTCAAA 17
V_MYCMAX_02_M00123 TRANSFAC - 37906581 37906592 9.0E-06 CACCACGTGGCA 12
V_NGFIC_01_M00244 TRANSFAC + 37903884 37903895 4.0E-06 GTGCGTGGGTGT 12
V_ZBED6_01_M01598 TRANSFAC + 37901809 37901820 7.0E-06 GAGGCTCGCCGG 12
V_ZBP89_Q4_M01816 TRANSFAC - 37903856 37903865 4.0E-06 CCCTCCCCCA 10
V_HNF1B_04_M02266 TRANSFAC - 37900985 37900996 2.0E-06 TCACTGATTAAC 12
MYC_MAX_MA0059.1 JASPAR + 37906581 37906591 9.0E-06 TGCCACGTGGT 11
V_E47_02_M00071 TRANSFAC - 37905032 37905047 4.0E-06 CAGTCCAGGTGTTCAC 16
V_MAZ_Q6_01_M02023 TRANSFAC - 37903322 37903335 1.0E-06 GAGGGAGGGAAGGA 14
V_AP2BETA_Q3_M01858 TRANSFAC - 37905081 37905096 8.0E-06 GCTCCGGCCTGGAGAG 16
V_HNF1_Q6_01_M01011 TRANSFAC - 37900981 37901001 9.0E-06 TGGAGTCACTGATTAACATGC 21
V_SREBP_Q6_M01168 TRANSFAC + 37903038 37903052 9.0E-06 CCTCTCACCTCACTC 15
V_NFE4_Q5_M02105 TRANSFAC + 37905077 37905088 5.0E-06 ACCCCTCTCCAG 12
V_ERR1_Q3_M01841 TRANSFAC + 37901787 37901801 9.0E-06 AAGTGTCCTTTAATA 15
V_SOX12_04_M02900 TRANSFAC - 37905622 37905637 3.0E-06 CATCACACAAAGCACT 16
V_MYCN_01_M02259 TRANSFAC - 37906582 37906591 3.0E-06 ACCACGTGGC 10
V_SP1_01_M00008 TRANSFAC - 37902121 37902130 3.0E-06 GGGGCGGGGT 10
V_SOX11_03_M02795 TRANSFAC - 37904976 37904992 6.0E-06 ACCAGAACAAAAGAAGC 17
V_EGR2_01_M00246 TRANSFAC + 37903884 37903895 2.0E-06 GTGCGTGGGTGT 12
V_MZF1_02_M00084 TRANSFAC - 37903373 37903385 1.0E-06 GGGCGAGGGGGAA 13
V_TFIII_Q6_M00706 TRANSFAC - 37903328 37903336 6.0E-06 AGAGGGAGG 9
V_ALPHACP1_01_M00687 TRANSFAC + 37904514 37904524 1.0E-05 CAGACAATGAG 11
V_FAC1_01_M00456 TRANSFAC - 37904232 37904245 0.0E+00 ACACACAACACAAA 14
V_PLAG1_01_M01778 TRANSFAC + 37905573 37905588 5.0E-06 GAGGCATCAAGGAGGT 16
V_TEF1_Q6_03_M01817 TRANSFAC + 37904279 37904287 6.0E-06 GTGGAATGT 9
V_PXR_Q2_M00964 TRANSFAC + 37904960 37904971 9.0E-06 AGGGTCAAGGAA 12
V_ZBTB12_04_M02928 TRANSFAC + 37907619 37907633 8.0E-06 AAGTATTAGAACCAT 15
V_SRF_01_M00152 TRANSFAC - 37900953 37900970 5.0E-06 GATCCCTTATTTGGGAGG 18
V_PLZF_02_M01075 TRANSFAC - 37906501 37906529 1.0E-06 GTACTTCCTTTGTAAATCTGTATCTAAAG 29
V_ZFP281_01_M01597 TRANSFAC + 37903856 37903866 1.0E-06 TGGGGGAGGGG 11
V_SRF_02_M01257 TRANSFAC + 37900955 37900972 2.0E-06 TCCCAAATAAGGGATCCA 18
V_LXRA_RXRA_Q3_M00647 TRANSFAC + 37905044 37905058 7.0E-06 ACTGAGGTCAGGTGC 15
V_SOX2_01_M02246 TRANSFAC + 37904980 37904994 4.0E-06 CTTTTGTTCTGGTGA 15
V_EWSR1FLI1_01_M02252 TRANSFAC - 37903295 37903312 6.0E-06 GGAGGGAAAGAAGAAGGG 18
V_EWSR1FLI1_01_M02252 TRANSFAC - 37903299 37903316 3.0E-06 GAAGGGAGGGAAAGAAGA 18
V_EWSR1FLI1_01_M02252 TRANSFAC - 37903304 37903321 1.0E-06 GAAAGGAAGGGAGGGAAA 18
V_EWSR1FLI1_01_M02252 TRANSFAC - 37903308 37903325 5.0E-06 AGGAGAAAGGAAGGGAGG 18
V_EWSR1FLI1_01_M02252 TRANSFAC - 37903312 37903329 1.0E-06 GGGAAGGAGAAAGGAAGG 18
V_EWSR1FLI1_01_M02252 TRANSFAC - 37903319 37903336 8.0E-06 AGAGGGAGGGAAGGAGAA 18
V_EWSR1FLI1_01_M02252 TRANSFAC - 37903323 37903340 1.0E-06 GGAGAGAGGGAGGGAAGG 18
V_EKLF_Q5_M01874 TRANSFAC - 37903888 37903897 9.0E-06 CCACACCCAC 10
V_SP1_Q2_01_M00933 TRANSFAC + 37902122 37902131 4.0E-06 CCCCGCCCCC 10
V_UF1H3BETA_Q6_M01068 TRANSFAC - 37902088 37902101 9.0E-06 CTCGGGGGTGGGGC 14
V_ELF5_04_M02241 TRANSFAC - 37906520 37906528 4.0E-06 TACTTCCTT 9
V_EHF_07_M02849 TRANSFAC - 37906516 37906531 3.0E-06 TAGTACTTCCTTTGTA 16
V_COUP_DR1_Q6_M00765 TRANSFAC + 37905068 37905080 8.0E-06 GGACCCCTGACCC 13
V_SMAD1_01_M01590 TRANSFAC - 37903315 37903326 7.0E-06 AAGGAGAAAGGA 12
V_SMAD1_01_M01590 TRANSFAC - 37904979 37904990 1.0E-06 CAGAACAAAAGA 12
V_SPI1_02_M02043 TRANSFAC + 37906519 37906528 3.0E-06 AAAGGAAGTA 10
V_EGR3_01_M00245 TRANSFAC + 37903884 37903895 5.0E-06 GTGCGTGGGTGT 12
V_NANOG_02_M01247 TRANSFAC - 37904975 37904994 1.0E-06 TCACCAGAACAAAAGAAGCC 20
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL