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RBM6


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
10180 RNA binding motif protein 6 chr3 +49972476 - 49977976 49977476

Transcription Factor Binding Sites

 
Download all TFBS in the RBM6 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
Mafb_bZIP_DBD_monomeric_12_1 SELEX + 49974679 49974690 6.0E-06 AGATTGCTGACT 12
RUNX3_RUNX_full_monomeric_10_1 SELEX + 49977345 49977354 7.0E-06 AAACCACAAC 10
RUNX2_RUNX_DBD_monomeric_9_1 SELEX + 49977345 49977353 8.0E-06 AAACCACAA 9
RUNX2_RUNX_DBD_monomeric_9_1 SELEX - 49977998 49978006 3.0E-06 AAACCGCAA 9
HOXD8_homeodomain_DBD_monomeric_10_1 SELEX + 49980172 49980181 9.0E-06 AAAAATTAGC 10
znf143_MA0088.1 JASPAR + 49977506 49977525 6.0E-06 CATCTCCCAGCGGGCCGAGC 20
IRF9_IRF_full_trimeric_15_1 SELEX - 49974688 49974702 7.0E-06 AAGGAAACTGCAAGT 15
IRF9_IRF_full_trimeric_15_1 SELEX + 49980308 49980322 4.0E-06 AAAGAAACTGTAACC 15
HNF4A_MA0114.1 JASPAR + 49977333 49977345 9.0E-06 AGGGCAGAGGCCA 13
FOXO3_forkhead_full_dimeric_14_1 SELEX - 49980324 49980337 4.0E-06 GTTAACTTGTTTAA 14
RUNX1_MA0002.2 JASPAR - 49977345 49977355 8.0E-06 AGTTGTGGTTT 11
IRF3_IRF_full_trimeric_21_1 SELEX - 49974687 49974707 4.0E-06 GCTGGAAGGAAACTGCAAGTC 21
IRF3_IRF_full_trimeric_21_1 SELEX + 49980303 49980323 2.0E-06 GAAAAAAAGAAACTGTAACCA 21
Sox3_HMG_DBD_dimeric_17_1 SELEX + 49979989 49980005 8.0E-06 AAGCAATACCACTATTT 17
FOXJ2_forkhead_DBD_dimeric_14_1 SELEX + 49980317 49980330 8.0E-06 GTAACCATTAAACA 14
V_FOXP1_01_M00987 TRANSFAC - 49980294 49980313 1.0E-06 TTCTTTTTTTCTTTTTTTTT 20
V_TCF3_01_M01594 TRANSFAC - 49980164 49980176 3.0E-06 TTTTTGTATTTTT 13
V_TCF3_01_M01594 TRANSFAC - 49980296 49980308 3.0E-06 TTTTTCTTTTTTT 13
V_MEQCJUN_02_M02048 TRANSFAC + 49980240 49980250 7.0E-06 GCTGAGGTCAT 11
V_OSF2_Q6_M00731 TRANSFAC - 49977549 49977556 1.0E-05 ACCACAAA 8
V_MAFK_03_M02776 TRANSFAC + 49974677 49974691 1.0E-06 CTAGATTGCTGACTT 15
V_SMAD3_Q6_01_M01888 TRANSFAC + 49978085 49978097 2.0E-06 GGACAGACACAAG 13
V_NRSF_Q4_M01028 TRANSFAC + 49977583 49977601 6.0E-06 CCGGTGTCCGCGGCGCTGG 19
V_BCL6_01_M01183 TRANSFAC - 49980295 49980310 2.0E-06 TTTTTTTCTTTTTTTT 16
V_MAFB_05_M02775 TRANSFAC + 49974678 49974694 5.0E-06 TAGATTGCTGACTTGCA 17
V_AML3_Q6_M01856 TRANSFAC + 49977346 49977353 1.0E-05 AACCACAA 8
V_SP1_Q6_01_M00931 TRANSFAC + 49977874 49977883 4.0E-06 GGGGCGGGGC 10
V_IRF_Q6_01_M00972 TRANSFAC + 49980297 49980307 6.0E-06 AAAAAAGAAAA 11
V_IRF_Q6_01_M00972 TRANSFAC + 49980305 49980315 5.0E-06 AAAAAAGAAAC 11
V_IRF2_Q6_M01882 TRANSFAC + 49980295 49980310 5.0E-06 AAAAAAAAGAAAAAAA 16
V_IRF2_Q6_M01882 TRANSFAC + 49980303 49980318 6.0E-06 GAAAAAAAGAAACTGT 16
V_EAR2_Q2_M01728 TRANSFAC - 49977332 49977345 7.0E-06 TGGCCTCTGCCCTG 14
V_P53_DECAMER_Q2_M00761 TRANSFAC + 49977442 49977451 7.0E-06 AGGCAAGTCC 10
V_AP2_Q6_01_M00915 TRANSFAC - 49977869 49977881 6.0E-06 CCCGCCCCAGGCC 13
V_IRF3_05_M02767 TRANSFAC + 49980304 49980317 2.0E-06 AAAAAAAGAAACTG 14
V_HNF4A_03_M02220 TRANSFAC + 49977333 49977345 9.0E-06 AGGGCAGAGGCCA 13
V_COUPTF_Q6_M01036 TRANSFAC - 49980232 49980254 5.0E-06 TGGCATGACCTCAGCTCACTGCA 23
V_PU1_Q4_M01172 TRANSFAC - 49980296 49980314 4.0E-06 TTTCTTTTTTTCTTTTTTT 19
V_TCFAP2E_04_M02926 TRANSFAC + 49980289 49980302 0.0E+00 ATCTCAAAAAAAAA 14
V_TCFAP2E_04_M02926 TRANSFAC + 49980298 49980311 2.0E-06 AAAAAGAAAAAAAG 14
V_TCFAP2E_04_M02926 TRANSFAC + 49980299 49980312 6.0E-06 AAAAGAAAAAAAGA 14
V_ELF4_04_M02850 TRANSFAC + 49980290 49980306 0.0E+00 TCTCAAAAAAAAAGAAA 17
V_HMBOX1_01_M01456 TRANSFAC + 49980324 49980340 3.0E-06 TTAAACAAGTTAACTTC 17
V_ZFP105_03_M02827 TRANSFAC + 49980291 49980305 1.0E-06 CTCAAAAAAAAAGAA 15
V_ZFP105_03_M02827 TRANSFAC + 49980294 49980308 3.0E-06 AAAAAAAAAGAAAAA 15
V_ZFP105_03_M02827 TRANSFAC + 49980297 49980311 9.0E-06 AAAAAAGAAAAAAAG 15
V_RUNX1_01_M02257 TRANSFAC - 49977345 49977355 8.0E-06 AGTTGTGGTTT 11
V_HES1_Q2_M01009 TRANSFAC + 49978047 49978061 9.0E-06 AGCTCTTGTGCTTAG 15
V_AML2_01_M01759 TRANSFAC + 49977346 49977353 1.0E-05 AACCACAA 8
V_RSRFC4_Q2_M00407 TRANSFAC + 49980159 49980175 1.0E-05 CTACTAAAAATACAAAA 17
V_CDX2_01_M01449 TRANSFAC - 49974740 49974755 3.0E-06 TTGGGCAATAAATCTG 16
V_RFX4_04_M02893 TRANSFAC - 49980034 49980048 9.0E-06 CTCCCTGGTTACAGA 15
V_IRF_Q6_M00772 TRANSFAC - 49980297 49980311 4.0E-06 CTTTTTTTCTTTTTT 15
V_IRF_Q6_M00772 TRANSFAC - 49980305 49980319 0.0E+00 TACAGTTTCTTTTTT 15
V_CDX2_Q5_M00729 TRANSFAC + 49974739 49974752 9.0E-06 CCAGATTTATTGCC 14
V_HNF1_Q6_01_M01011 TRANSFAC + 49980299 49980319 4.0E-06 AAAAGAAAAAAAGAAACTGTA 21
V_BCL6_Q3_M01171 TRANSFAC + 49980394 49980403 8.0E-06 TGTTCTAGGT 10
V_ISRE_01_M00258 TRANSFAC - 49980303 49980317 0.0E+00 CAGTTTCTTTTTTTC 15
V_CDX1_01_M01373 TRANSFAC - 49974740 49974755 8.0E-06 TTGGGCAATAAATCTG 16
V_MEF2_04_M00233 TRANSFAC + 49980155 49980176 6.0E-06 GTATCTACTAAAAATACAAAAA 22
V_ERALPHA_01_M01801 TRANSFAC + 49980228 49980242 2.0E-06 AGGTTGCAGTGAGCT 15
V_ISGF3G_03_M02771 TRANSFAC + 49980304 49980318 8.0E-06 AAAAAAAGAAACTGT 15
V_STAF_02_M00264 TRANSFAC + 49977507 49977527 4.0E-06 ATCTCCCAGCGGGCCGAGCGC 21
V_OCT4_02_M01124 TRANSFAC - 49980012 49980026 6.0E-06 TTTGAGATACTAAAG 15
V_ICSBP_Q6_M00699 TRANSFAC + 49980306 49980317 0.0E+00 AAAAAGAAACTG 12
V_HOXD9_Q2_M01834 TRANSFAC + 49980319 49980328 8.0E-06 AACCATTAAA 10
V_PTF1BETA_Q6_M00657 TRANSFAC + 49977304 49977317 4.0E-06 GAGGAAAGCACAAG 14
V_ELF1_Q6_M00746 TRANSFAC - 49978004 49978015 4.0E-06 GAAACAGGAAAA 12
V_ZIC2_05_M02940 TRANSFAC + 49977353 49977367 7.0E-06 ACTCCCAGCAGGTCA 15
V_MTF1_06_M02882 TRANSFAC + 49980297 49980310 0.0E+00 AAAAAAGAAAAAAA 14
V_T3R_01_M00239 TRANSFAC + 49980239 49980254 4.0E-06 AGCTGAGGTCATGCCA 16
V_IPF1_05_M01255 TRANSFAC + 49980319 49980330 9.0E-06 AACCATTAAACA 12
V_E2F3_03_M02743 TRANSFAC - 49977384 49977398 3.0E-06 AAGAAGGCGCGCTTA 15
V_HNF4_Q6_01_M01031 TRANSFAC + 49977333 49977346 5.0E-06 AGGGCAGAGGCCAA 14
V_DMRT7_01_M01151 TRANSFAC - 49980310 49980323 9.0E-06 TGGTTACAGTTTCT 14
V_E2F2_03_M02742 TRANSFAC - 49977384 49977398 6.0E-06 AAGAAGGCGCGCTTA 15
V_NRSF_01_M00256 TRANSFAC - 49977582 49977602 7.0E-06 CCCAGCGCCGCGGACACCGGA 21
V_T3RBETA_Q6_01_M02119 TRANSFAC + 49980234 49980250 3.0E-06 CAGTGAGCTGAGGTCAT 17
V_IRF1_Q6_01_M01881 TRANSFAC - 49980296 49980309 8.0E-06 TTTTTTCTTTTTTT 14
V_IRF1_Q6_01_M01881 TRANSFAC - 49980304 49980317 2.0E-06 CAGTTTCTTTTTTT 14
V_SRF_06_M02916 TRANSFAC + 49980289 49980305 7.0E-06 ATCTCAAAAAAAAAGAA 17
V_SRF_06_M02916 TRANSFAC + 49980290 49980306 2.0E-06 TCTCAAAAAAAAAGAAA 17
V_SRF_06_M02916 TRANSFAC + 49980293 49980309 8.0E-06 CAAAAAAAAAGAAAAAA 17
V_SRF_06_M02916 TRANSFAC + 49980296 49980312 7.0E-06 AAAAAAAGAAAAAAAGA 17
V_SRF_06_M02916 TRANSFAC + 49980297 49980313 5.0E-06 AAAAAAGAAAAAAAGAA 17
V_SRF_06_M02916 TRANSFAC + 49980298 49980314 8.0E-06 AAAAAGAAAAAAAGAAA 17
V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC - 49977345 49977352 1.0E-05 TGTGGTTT 8
V_SOX1_03_M02802 TRANSFAC + 49980163 49980178 6.0E-06 TAAAAATACAAAAATT 16
V_PAX1_B_M00326 TRANSFAC + 49977718 49977735 3.0E-06 CAGGCCCGCTCTAGACAT 18
V_CMAF_01_M01070 TRANSFAC + 49974678 49974696 9.0E-06 TAGATTGCTGACTTGCAGT 19
V_TAACC_B_M00331 TRANSFAC - 49974669 49974691 6.0E-06 AAGTCAGCAATCTAGCAGAAAAC 23
V_DTYPEPA_B_M00334 TRANSFAC + 49980320 49980329 0.0E+00 ACCATTAAAC 10
V_SMAD1_01_M01590 TRANSFAC + 49980298 49980309 3.0E-06 AAAAAGAAAAAA 12
V_DMRT5_01_M01150 TRANSFAC - 49980311 49980325 0.0E+00 AATGGTTACAGTTTC 15
V_NANOG_02_M01247 TRANSFAC + 49980290 49980309 8.0E-06 TCTCAAAAAAAAAGAAAAAA 20
V_NANOG_02_M01247 TRANSFAC + 49980294 49980313 0.0E+00 AAAAAAAAAGAAAAAAAGAA 20
V_NANOG_02_M01247 TRANSFAC + 49980297 49980316 4.0E-06 AAAAAAGAAAAAAAGAAACT 20
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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