Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

RCL1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 10171 RNA terminal phosphate cyclase-like 1 chr9 + 4787833 - 4793333 4792833 Transcription Factor Binding Sites   Download all TFBS in the RCL1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR - 4797550 4797568 2.0E-06 TAACCACTAGAGGCCAGTA 19 HOXD12_homeodomain_DBD_monomeric_9_1 SELEX - 4788750 4788758 9.0E-06 GTAATTAAA 9 FOXJ2_forkhead_DBD_dimeric_13_1 SELEX - 4793781 4793793 3.0E-06 GAAAACAAACACA 13 Hoxc10_homeodomain_DBD_monomeric_10_2 SELEX - 4788749 4788758 5.0E-06 GTAATTAAAT 10 MSX2_homeodomain_DBD_dimeric_18_1 SELEX + 4789663 4789680 0.0E+00 CAAATTATACTACAATTA 18 Hoxd9_homeodomain_DBD_monomeric_10_1 SELEX - 4788749 4788758 2.0E-06 GTAATTAAAT 10 POU2F1_POU_DBD_dimeric_14_1 SELEX + 4788103 4788116 9.0E-06 TCAACATATGCAAA 14 BARX1_homeodomain_DBD_dimeric_17_1 SELEX + 4789664 4789680 1.0E-06 AAATTATACTACAATTA 17 EMX2_homeodomain_DBD_dimeric_14_1 SELEX + 4788114 4788127 1.0E-06 AAATTAAGTAATGT 14 EMX2_homeodomain_DBD_dimeric_14_1 SELEX - 4788114 4788127 5.0E-06 ACATTACTTAATTT 14 EMX2_homeodomain_DBD_dimeric_14_1 SELEX + 4788870 4788883 1.0E-06 AAATTAAAAAATTA 14 EMX2_homeodomain_DBD_dimeric_14_1 SELEX - 4788870 4788883 3.0E-06 TAATTTTTTAATTT 14 Arx_homeodomain_DBD_dimeric_13_1 SELEX + 4788746 4788758 2.0E-06 GAAATTTAATTAC 13 Arx_homeodomain_DBD_dimeric_13_1 SELEX - 4788746 4788758 3.0E-06 GTAATTAAATTTC 13 FOXL1_forkhead_full_dimeric_13_1 SELEX - 4793782 4793794 1.0E-06 TGAAAACAAACAC 13 POU5F1P1_POU_DBD_monomeric_9_1 SELEX + 4788109 4788117 2.0E-06 TATGCAAAT 9 Tp53_p53l_DBD_dimeric_18_2 SELEX + 4788898 4788915 0.0E+00 AGCATGCCTGTACATGCC 18 Tp53_p53l_DBD_dimeric_18_2 SELEX - 4788898 4788915 1.0E-06 GGCATGTACAGGCATGCT 18 POU2F3_POU_DBD_monomeric_9_1 SELEX + 4788109 4788117 2.0E-06 TATGCAAAT 9 SOX8_HMG_full_dimeric_17_1 SELEX - 4788170 4788186 3.0E-06 CATCAATTGAAATGATC 17 PDX1_homeodomain_DBD_monomeric_8_1 SELEX - 4788751 4788758 5.0E-06 GTAATTAA 8 POU1F1_POU_DBD_monomeric_14_1 SELEX + 4788107 4788120 0.0E+00 CATATGCAAATTAA 14 Alx1_homeodomain_DBD_dimeric_13_1 SELEX + 4788746 4788758 2.0E-06 GAAATTTAATTAC 13 Alx1_homeodomain_DBD_dimeric_13_1 SELEX - 4788746 4788758 3.0E-06 GTAATTAAATTTC 13 Tp73_p53l_DBD_dimeric_18_1 SELEX + 4788898 4788915 1.0E-06 AGCATGCCTGTACATGCC 18 Tp73_p53l_DBD_dimeric_18_1 SELEX - 4788898 4788915 2.0E-06 GGCATGTACAGGCATGCT 18 POU2F2_POU_DBD_monomeric_11_1 SELEX + 4788108 4788118 0.0E+00 ATATGCAAATT 11 ISX_homeodomain_DBD_dimeric_13_1 SELEX + 4788746 4788758 2.0E-06 GAAATTTAATTAC 13 POU3F4_POU_DBD_monomeric_9_1 SELEX + 4788109 4788117 2.0E-06 TATGCAAAT 9 Sox1_HMG_DBD_dimeric_13_1 SELEX - 4788020 4788032 6.0E-06 TCAGTTTCATTGA 13 Pou2f2_POU_DBD_monomeric_9_1 SELEX + 4788109 4788117 2.0E-06 TATGCAAAT 9 Pax4_MA0068.1 JASPAR - 4793751 4793780 1.0E-06 GAATTTTAAAAATTTCTTTATCCACACCCA 30 HOXA1_homeodomain_DBD_monomeric_10_1 SELEX - 4788750 4788759 6.0E-06 GGTAATTAAA 10 Spz1_MA0111.1 JASPAR + 4792391 4792401 1.0E-06 AGGGTTACAGC 11 TCF7L1_HMG_full_monomeric_12_1 SELEX + 4788159 4788170 1.0E-05 AATGATCAAATG 12 PROP1_homeodomain_full_dimeric_11_1 SELEX + 4788747 4788757 1.0E-06 AAATTTAATTA 11 PROP1_homeodomain_full_dimeric_11_1 SELEX - 4788747 4788757 5.0E-06 TAATTAAATTT 11 Dlx2_homeodomain_DBD_monomeric_8_1 SELEX - 4788751 4788758 5.0E-06 GTAATTAA 8 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX - 4788750 4788759 5.0E-06 GGTAATTAAA 10 POU3F3_POU_DBD_monomeric_13_1 SELEX + 4788107 4788119 0.0E+00 CATATGCAAATTA 13 HOXC12_homeodomain_DBD_monomeric_9_1 SELEX - 4788750 4788758 7.0E-06 GTAATTAAA 9 Foxc1_forkhead_DBD_dimeric_11_1 SELEX - 4793783 4793793 1.0E-06 GAAAACAAACA 11 ALX3_homeodomain_full_dimeric_13_1 SELEX + 4788746 4788758 1.0E-06 GAAATTTAATTAC 13 ALX3_homeodomain_full_dimeric_13_1 SELEX - 4788746 4788758 3.0E-06 GTAATTAAATTTC 13 NR2E1_nuclearreceptor_full_dimeric_14_1 SELEX + 4788870 4788883 3.0E-06 AAATTAAAAAATTA 14 HOXB2_homeodomain_DBD_monomeric_10_1 SELEX - 4788750 4788759 5.0E-06 GGTAATTAAA 10 HOXD8_homeodomain_DBD_monomeric_10_1 SELEX + 4788868 4788877 9.0E-06 AAAAATTAAA 10 HOXD8_homeodomain_DBD_monomeric_10_1 SELEX + 4788876 4788885 9.0E-06 AAAAATTAGC 10 SOX14_HMG_DBD_dimeric_13_1 SELEX - 4788020 4788032 4.0E-06 TCAGTTTCATTGA 13 DRGX_homeodomain_DBD_dimeric_13_1 SELEX + 4788746 4788758 1.0E-06 GAAATTTAATTAC 13 DRGX_homeodomain_DBD_dimeric_13_1 SELEX - 4788746 4788758 4.0E-06 GTAATTAAATTTC 13 MEOX2_homeodomain_DBD_monomeric_10_1 SELEX - 4788750 4788759 3.0E-06 GGTAATTAAA 10 PHOX2B_homeodomain_full_dimeric_11_1 SELEX + 4788747 4788757 1.0E-06 AAATTTAATTA 11 PHOX2B_homeodomain_full_dimeric_11_1 SELEX - 4788747 4788757 3.0E-06 TAATTAAATTT 11 Alx4_homeodomain_DBD_dimeric_13_1 SELEX + 4788746 4788758 1.0E-06 GAAATTTAATTAC 13 Alx4_homeodomain_DBD_dimeric_13_1 SELEX - 4788746 4788758 2.0E-06 GTAATTAAATTTC 13 VAX1_homeodomain_DBD_monomeric_8_1 SELEX + 4788751 4788758 9.0E-06 TTAATTAC 8 Lhx3_MA0135.1 JASPAR - 4788745 4788757 2.0E-06 TAATTAAATTTCT 13 Lhx3_MA0135.1 JASPAR + 4788747 4788759 8.0E-06 AAATTTAATTACC 13 FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 4793783 4793793 1.0E-06 GAAAACAAACA 11 MAFK_bZIP_DBD_dimeric_21_1 SELEX + 4788181 4788201 2.0E-06 TTGATGCTGAAAAAGCACTTG 21 MAFK_bZIP_DBD_dimeric_21_1 SELEX - 4788181 4788201 4.0E-06 CAAGTGCTTTTTCAGCATCAA 21 TEAD3_TEA_DBD_dimeric_17_1 SELEX - 4792541 4792557 5.0E-06 GGATTCTTAGCATTACT 17 TEAD3_TEA_DBD_dimeric_17_1 SELEX + 4793766 4793782 9.0E-06 AAATTTTTAAAATTCTG 17 Msx3_homeodomain_DBD_dimeric_18_1 SELEX + 4789663 4789680 0.0E+00 CAAATTATACTACAATTA 18 Msx3_homeodomain_DBD_dimeric_18_1 SELEX - 4789664 4789681 9.0E-06 CTAATTGTAGTATAATTT 18 PRRX1_homeodomain_full_dimeric_11_1 SELEX + 4788747 4788757 1.0E-06 AAATTTAATTA 11 PRRX1_homeodomain_full_dimeric_11_1 SELEX - 4788747 4788757 1.0E-05 TAATTAAATTT 11 CART1_homeodomain_DBD_dimeric_13_1 SELEX + 4788746 4788758 1.0E-06 GAAATTTAATTAC 13 POU3F1_POU_DBD_monomeric_12_1 SELEX + 4788108 4788119 0.0E+00 ATATGCAAATTA 12 Uncx_homeodomain_DBD_dimeric_13_1 SELEX + 4788746 4788758 1.0E-06 GAAATTTAATTAC 13 Uncx_homeodomain_DBD_dimeric_13_1 SELEX - 4788746 4788758 9.0E-06 GTAATTAAATTTC 13 Hoxd3_homeodomain_DBD_monomeric_10_1 SELEX - 4788750 4788759 8.0E-06 GGTAATTAAA 10 HOXB3_homeodomain_DBD_monomeric_10_1 SELEX - 4788750 4788759 9.0E-06 GGTAATTAAA 10 MAFG_bZIP_full_dimeric_21_1 SELEX + 4788181 4788201 9.0E-06 TTGATGCTGAAAAAGCACTTG 21 MAFG_bZIP_full_dimeric_21_1 SELEX - 4788181 4788201 4.0E-06 CAAGTGCTTTTTCAGCATCAA 21 MAX_MA0058.1 JASPAR + 4792945 4792954 7.0E-06 AACCACGTGG 10 VAX2_homeodomain_DBD_monomeric_8_1 SELEX + 4788751 4788758 5.0E-06 TTAATTAC 8 POU2F1_POU_DBD_monomeric_12_1 SELEX + 4788107 4788118 0.0E+00 CATATGCAAATT 12 SOX18_HMG_full_dimeric_15_3 SELEX + 4788048 4788062 3.0E-06 AAAAAGATCATTCAT 15 TEAD1_TEA_full_dimeric_17_1 SELEX - 4793764 4793780 7.0E-06 GAATTTTAAAAATTTCT 17 TEAD1_TEA_full_dimeric_17_1 SELEX + 4793766 4793782 4.0E-06 AAATTTTTAAAATTCTG 17 SRY_HMG_DBD_dimeric_13_1 SELEX - 4788020 4788032 7.0E-06 TCAGTTTCATTGA 13 PHOX2A_homeodomain_DBD_dimeric_11_1 SELEX + 4788747 4788757 0.0E+00 AAATTTAATTA 11 PHOX2A_homeodomain_DBD_dimeric_11_1 SELEX - 4788747 4788757 4.0E-06 TAATTAAATTT 11 TP53_MA0106.1 JASPAR + 4788895 4788914 0.0E+00 TGGAGCATGCCTGTACATGC 20 TP53_MA0106.1 JASPAR - 4788899 4788918 2.0E-06 ACAGGCATGTACAGGCATGC 20 EMX1_homeodomain_DBD_dimeric_14_1 SELEX + 4788114 4788127 3.0E-06 AAATTAAGTAATGT 14 EMX1_homeodomain_DBD_dimeric_14_1 SELEX - 4788114 4788127 3.0E-06 ACATTACTTAATTT 14 EMX1_homeodomain_DBD_dimeric_14_1 SELEX + 4788870 4788883 1.0E-06 AAATTAAAAAATTA 14 EMX1_homeodomain_DBD_dimeric_14_1 SELEX - 4788870 4788883 6.0E-06 TAATTTTTTAATTT 14 POU3F3_POU_DBD_dimeric_12_1 SELEX + 4792273 4792284 9.0E-06 TAAAATAAGCAA 12 POU3F2_POU_DBD_monomeric_12_1 SELEX + 4788108 4788119 0.0E+00 ATATGCAAATTA 12 MSX1_homeodomain_DBD_dimeric_18_1 SELEX + 4789663 4789680 0.0E+00 CAAATTATACTACAATTA 18 MSX1_homeodomain_DBD_dimeric_18_1 SELEX - 4789664 4789681 7.0E-06 CTAATTGTAGTATAATTT 18 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX - 4788749 4788759 1.0E-06 GGTAATTAAAT 11 MNX1_homeodomain_DBD_monomeric_10_1 SELEX - 4788750 4788759 1.0E-06 GGTAATTAAA 10 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 4792271 4792283 7.0E-06 AATAAAATAAGCA 13 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 4793783 4793795 5.0E-06 CTGAAAACAAACA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 4793781 4793793 1.0E-06 GAAAACAAACACA 13 Meox2_homeodomain_DBD_monomeric_8_1 SELEX + 4788751 4788758 9.0E-06 TTAATTAC 8 V_HOXA9_01_M01351 TRANSFAC - 4788745 4788761 2.0E-06 AGGGTAATTAAATTTCT 17 V_FOXP1_01_M00987 TRANSFAC - 4788862 4788881 7.0E-06 ATTTTTTAATTTTTTTGTAG 20 V_CEBPG_Q6_M00622 TRANSFAC + 4789656 4789668 1.0E-06 CTGATTTCAAATT 13 V_KLF15_Q2_M01714 TRANSFAC + 4792869 4792882 8.0E-06 GAGGCGGGGAGGTG 14 V_TST1_02_M01316 TRANSFAC + 4788111 4788127 9.0E-06 TGCAAATTAAGTAATGT 17 V_TST1_02_M01316 TRANSFAC + 4788867 4788883 6.0E-06 AAAAAATTAAAAAATTA 17 V_TST1_02_M01316 TRANSFAC - 4788870 4788886 2.0E-06 AGCTAATTTTTTAATTT 17 V_MSX3_01_M01341 TRANSFAC - 4788748 4788763 5.0E-06 CAAGGGTAATTAAATT 16 V_DBX1_01_M01483 TRANSFAC + 4788866 4788882 0.0E+00 AAAAAAATTAAAAAATT 17 V_DBX1_01_M01483 TRANSFAC + 4788867 4788883 4.0E-06 AAAAAATTAAAAAATTA 17 V_DBX1_01_M01483 TRANSFAC - 4788867 4788883 4.0E-06 TAATTTTTTAATTTTTT 17 V_BTEB3_Q5_M01865 TRANSFAC + 4792292 4792304 7.0E-06 CTGTGGGAGGATT 13 V_SOX40_04_M02908 TRANSFAC + 4789662 4789677 5.0E-06 TCAAATTATACTACAA 16 V_DLX3_01_M01400 TRANSFAC + 4788746 4788762 2.0E-06 GAAATTTAATTACCCTT 17 V_ZEC_01_M01081 TRANSFAC + 4797514 4797526 4.0E-06 CATTTTTGGTTGT 13 V_HMGIY_Q3_M01010 TRANSFAC - 4788742 4788756 2.0E-06 AATTAAATTTCTTCA 15 V_HMGIY_Q3_M01010 TRANSFAC - 4788864 4788878 3.0E-06 TTTTAATTTTTTTGT 15 V_HMGIY_Q3_M01010 TRANSFAC - 4788865 4788879 3.0E-06 TTTTTAATTTTTTTG 15 V_EVI1_04_M00081 TRANSFAC + 4788866 4788880 8.0E-06 AAAAAAATTAAAAAA 15 V_BCL6_01_M01183 TRANSFAC - 4788866 4788881 5.0E-06 ATTTTTTAATTTTTTT 16 V_BCL6_01_M01183 TRANSFAC - 4788867 4788882 3.0E-06 AATTTTTTAATTTTTT 16 V_BCL6_01_M01183 TRANSFAC - 4788868 4788883 3.0E-06 TAATTTTTTAATTTTT 16 V_BCL6_01_M01183 TRANSFAC - 4793762 4793777 0.0E+00 TTTTAAAAATTTCTTT 16 V_MAFB_05_M02775 TRANSFAC + 4797640 4797656 4.0E-06 AGTAGTGCTGATGTAGA 17 V_IK_Q5_M01169 TRANSFAC + 4788797 4788806 3.0E-06 TTTGGGAGGC 10 V_MAFB_03_M02879 TRANSFAC - 4793766 4793780 9.0E-06 GAATTTTAAAAATTT 15 V_PROP1_01_M01294 TRANSFAC - 4788747 4788757 0.0E+00 TAATTAAATTT 11 V_OCT1_Q5_01_M00930 TRANSFAC - 4788109 4788119 0.0E+00 TAATTTGCATA 11 V_ISL2_01_M01328 TRANSFAC - 4788114 4788129 1.0E-06 TTACATTACTTAATTT 16 V_MEIS1AHOXA9_01_M00420 TRANSFAC - 4793554 4793567 1.0E-06 TGAGAGGTTTATGG 14 V_OCT1_01_M00135 TRANSFAC + 4788104 4788122 0.0E+00 CAACATATGCAAATTAAGT 19 V_POU2F3_01_M01476 TRANSFAC + 4788106 4788121 0.0E+00 ACATATGCAAATTAAG 16 V_POU1F1_Q6_M00744 TRANSFAC - 4797620 4797629 7.0E-06 ATGGATAATT 10 V_FOXO3A_Q1_M01137 TRANSFAC - 4793783 4793794 7.0E-06 TGAAAACAAACA 12 V_CEBP_Q2_M00190 TRANSFAC - 4788114 4788127 5.0E-06 ACATTACTTAATTT 14 V_HOXA2_01_M01402 TRANSFAC - 4788746 4788761 7.0E-06 AGGGTAATTAAATTTC 16 V_HOXA2_01_M01402 TRANSFAC + 4788748 4788763 7.0E-06 AATTTAATTACCCTTG 16 V_HFH4_01_M00742 TRANSFAC + 4793780 4793792 0.0E+00 CTGTGTTTGTTTT 13 V_OCT_C_M00210 TRANSFAC - 4788108 4788120 0.0E+00 TTAATTTGCATAT 13 V_NKX61_03_M01489 TRANSFAC + 4788746 4788762 0.0E+00 GAAATTTAATTACCCTT 17 V_HOXC6_01_M01406 TRANSFAC + 4788865 4788881 8.0E-06 CAAAAAAATTAAAAAAT 17 V_LHX3_01_M01471 TRANSFAC + 4788865 4788881 7.0E-06 CAAAAAAATTAAAAAAT 17 V_PU1_Q4_M01172 TRANSFAC - 4788739 4788757 6.0E-06 TAATTAAATTTCTTCATTT 19 V_LHX3A_01_M00510 TRANSFAC + 4788749 4788758 3.0E-06 ATTTAATTAC 10 V_HOXD13_01_M01404 TRANSFAC + 4792266 4792281 2.0E-06 GTCTCAATAAAATAAG 16 V_LYF1_01_M00141 TRANSFAC + 4788797 4788805 9.0E-06 TTTGGGAGG 9 V_AP4_Q6_01_M00927 TRANSFAC + 4793469 4793477 1.0E-05 AACAGCTGC 9 V_GM497_04_M02864 TRANSFAC - 4792141 4792156 8.0E-06 ACACACACACACGCGC 16 V_CDX_Q5_M00991 TRANSFAC + 4793759 4793776 1.0E-06 GATAAAGAAATTTTTAAA 18 V_CEBPB_01_M00109 TRANSFAC + 4788114 4788127 1.0E-06 AAATTAAGTAATGT 14 V_CEBPB_01_M00109 TRANSFAC + 4788739 4788752 4.0E-06 AAATGAAGAAATTT 14 V_BARBIE_01_M00238 TRANSFAC + 4793366 4793380 9.0E-06 CTCCAAAGCCGGAGG 15 V_ELF4_04_M02850 TRANSFAC + 4788859 4788875 1.0E-06 TCTCTACAAAAAAATTA 17 V_ELF4_04_M02850 TRANSFAC + 4788861 4788877 5.0E-06 TCTACAAAAAAATTAAA 17 V_ROAZ_01_M00467 TRANSFAC - 4788755 4788768 6.0E-06 ACACCCAAGGGTAA 14 V_HOXA6_01_M01392 TRANSFAC + 4788748 4788763 1.0E-06 AATTTAATTACCCTTG 16 V_POU3F2_01_M00463 TRANSFAC - 4788116 4788129 8.0E-06 TTACATTACTTAAT 14 V_POU3F2_01_M00463 TRANSFAC - 4788741 4788754 4.0E-06 TTAAATTTCTTCAT 14 V_DBX2_01_M01360 TRANSFAC - 4788866 4788881 1.0E-05 ATTTTTTAATTTTTTT 16 V_CEBPE_Q6_M01868 TRANSFAC - 4788741 4788754 6.0E-06 TTAAATTTCTTCAT 14 V_LMX1_01_M01409 TRANSFAC + 4788865 4788881 4.0E-06 CAAAAAAATTAAAAAAT 17 V_ZFP105_03_M02827 TRANSFAC + 4788868 4788882 3.0E-06 AAAAATTAAAAAATT 15 V_MYCMAX_01_M00118 TRANSFAC + 4792944 4792957 4.0E-06 AAACCACGTGGACG 14 V_MYCMAX_01_M00118 TRANSFAC - 4792944 4792957 4.0E-06 CGTCCACGTGGTTT 14 V_HOXB13_01_M01467 TRANSFAC + 4792266 4792281 5.0E-06 GTCTCAATAAAATAAG 16 V_HNF3G_Q4_M02015 TRANSFAC + 4793783 4793790 7.0E-06 TGTTTGTT 8 V_CART1_01_M00416 TRANSFAC + 4792158 4792175 7.0E-06 AAGTTATTACAACTATCT 18 V_CMYC_01_M01145 TRANSFAC + 4792945 4792956 5.0E-06 AACCACGTGGAC 12 V_NKX61_01_M00424 TRANSFAC - 4788040 4788052 0.0E+00 TTTTTAATGTGTT 13 V_NKX61_01_M00424 TRANSFAC - 4788867 4788879 0.0E+00 TTTTTAATTTTTT 13 V_E12_Q6_M00693 TRANSFAC + 4793349 4793359 7.0E-06 GGCAGGTGGCG 11 V_DOBOX4_01_M01359 TRANSFAC - 4792258 4792274 7.0E-06 TATTGAGACACCTCTTT 17 V_KROX_Q6_M00982 TRANSFAC - 4793249 4793262 6.0E-06 CGCGCCCACGCCGC 14 V_CEBPD_Q6_M00621 TRANSFAC - 4788115 4788126 5.0E-06 CATTACTTAATT 12 V_CEBPD_Q6_M00621 TRANSFAC - 4788740 4788751 1.0E-06 AATTTCTTCATT 12 V_P53_03_M01651 TRANSFAC + 4788897 4788916 0.0E+00 GAGCATGCCTGTACATGCCT 20 V_P53_03_M01651 TRANSFAC - 4788897 4788916 0.0E+00 AGGCATGTACAGGCATGCTC 20 V_AMEF2_Q6_M00403 TRANSFAC + 4792268 4792285 3.0E-06 CTCAATAAAATAAGCAAC 18 V_HOXB9_01_M01426 TRANSFAC - 4788746 4788761 2.0E-06 AGGGTAATTAAATTTC 16 V_ARID3A_02_M02839 TRANSFAC + 4788849 4788863 8.0E-06 TGAAATATCATCTCT 15 V_FOXK1_04_M02856 TRANSFAC + 4788032 4788046 7.0E-06 AATTCAACAACACAT 15 V_HOXA1_01_M01487 TRANSFAC - 4788748 4788763 6.0E-06 CAAGGGTAATTAAATT 16 V_HOXB6_01_M01460 TRANSFAC - 4788748 4788763 7.0E-06 CAAGGGTAATTAAATT 16 MYC_MAX_MA0059.1 JASPAR + 4792945 4792955 4.0E-06 AACCACGTGGA 11 V_CDX2_01_M01449 TRANSFAC - 4788747 4788762 0.0E+00 AAGGGTAATTAAATTT 16 V_AP2BETA_Q3_M01858 TRANSFAC + 4793405 4793420 6.0E-06 GTCGGGGCCCGAGGGG 16 V_HNF3_Q6_M00791 TRANSFAC - 4793781 4793793 8.0E-06 GAAAACAAACACA 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC + 4793783 4793793 7.0E-06 TGTTTGTTTTC 11 V_NKX25_Q5_M01043 TRANSFAC - 4788940 4788949 6.0E-06 TCCCACTTCA 10 V_NKX52_01_M01315 TRANSFAC + 4788865 4788881 3.0E-06 CAAAAAAATTAAAAAAT 17 V_CDX1_01_M01373 TRANSFAC - 4788747 4788762 0.0E+00 AAGGGTAATTAAATTT 16 V_IRF3_06_M02871 TRANSFAC + 4792246 4792259 1.0E-06 TGAGAAAGGGGCAA 14 V_OCT1_04_M00138 TRANSFAC + 4788102 4788124 1.0E-06 TTCAACATATGCAAATTAAGTAA 23 V_OCT1_04_M00138 TRANSFAC + 4788864 4788886 5.0E-06 ACAAAAAAATTAAAAAATTAGCT 23 V_OCT1_08_M01354 TRANSFAC + 4788108 4788123 3.0E-06 ATATGCAAATTAAGTA 16 V_OCT1_08_M01354 TRANSFAC - 4788866 4788881 8.0E-06 ATTTTTTAATTTTTTT 16 V_HBP1_03_M02762 TRANSFAC - 4797621 4797636 0.0E+00 ATTTTGAATGGATAAT 16 V_MUSCLE_INI_B_M00321 TRANSFAC - 4788756 4788776 9.0E-06 AGCCACCCACACCCAAGGGTA 21 V_RFX_Q6_M00975 TRANSFAC + 4792697 4792705 4.0E-06 CTGTTGCCA 9 V_NCX_02_M01420 TRANSFAC + 4788866 4788882 0.0E+00 AAAAAAATTAAAAAATT 17 V_NCX_02_M01420 TRANSFAC - 4788867 4788883 0.0E+00 TAATTTTTTAATTTTTT 17 V_ARID3A_04_M02735 TRANSFAC - 4788746 4788762 6.0E-06 AAGGGTAATTAAATTTC 17 V_SP1_01_M00008 TRANSFAC + 4793397 4793406 7.0E-06 GAGGCGGGGT 10 V_CTCF_02_M01259 TRANSFAC - 4797552 4797571 8.0E-06 TTCTAACCACTAGAGGCCAG 20 V_SOX11_03_M02795 TRANSFAC + 4797608 4797624 4.0E-06 CCCACAACAAAGAATTA 17 V_CTCF_01_M01200 TRANSFAC - 4797550 4797569 4.0E-06 CTAACCACTAGAGGCCAGTA 20 V_NKX63_01_M01470 TRANSFAC + 4788746 4788762 0.0E+00 GAAATTTAATTACCCTT 17 V_OCT1_B_M00342 TRANSFAC + 4788109 4788118 1.0E-06 TATGCAAATT 10 V_OCT_Q6_M00795 TRANSFAC - 4788109 4788119 0.0E+00 TAATTTGCATA 11 V_FOXO1_Q5_M01216 TRANSFAC - 4793785 4793793 5.0E-06 GAAAACAAA 9 V_HOXD9_Q2_M01834 TRANSFAC + 4788041 4788050 3.0E-06 ACACATTAAA 10 V_GATA4_Q3_M00632 TRANSFAC - 4788779 4788790 6.0E-06 AGATTACAGGCA 12 V_GATA4_Q3_M00632 TRANSFAC - 4789699 4789710 6.0E-06 AGATTACAGGCA 12 V_PTF1BETA_Q6_M00657 TRANSFAC - 4793473 4793486 8.0E-06 GGAAAACGTGCAGC 14 V_ELF1_Q6_M00746 TRANSFAC - 4792932 4792943 9.0E-06 GGAACAGGAAGA 12 V_ZFP105_04_M02931 TRANSFAC + 4792264 4792280 8.0E-06 GTGTCTCAATAAAATAA 17 V_DLX7_01_M01486 TRANSFAC + 4788746 4788762 7.0E-06 GAAATTTAATTACCCTT 17 V_MTF1_06_M02882 TRANSFAC + 4788870 4788883 8.0E-06 AAATTAAAAAATTA 14 V_POU5F1_01_M01307 TRANSFAC + 4788109 4788118 6.0E-06 TATGCAAATT 10 V_BRN4_01_M01473 TRANSFAC - 4788870 4788886 6.0E-06 AGCTAATTTTTTAATTT 17 V_CEBPA_01_M00116 TRANSFAC - 4788114 4788127 3.0E-06 ACATTACTTAATTT 14 V_OCT2_01_M01368 TRANSFAC + 4788106 4788121 0.0E+00 ACATATGCAAATTAAG 16 V_OCT1_Q6_M00195 TRANSFAC + 4788106 4788120 1.0E-06 ACATATGCAAATTAA 15 V_HDX_01_M01333 TRANSFAC - 4789652 4789668 0.0E+00 AATTTGAAATCAGGTAA 17 V_NKX61_02_M01469 TRANSFAC + 4788746 4788761 8.0E-06 GAAATTTAATTACCCT 16 V_TCF7_04_M02921 TRANSFAC + 4792159 4792173 3.0E-06 AGTTATTACAACTAT 15 V_DMRT7_01_M01151 TRANSFAC + 4797508 4797521 8.0E-06 TGGAGACATTTTTG 14 V_LMX1B_01_M01363 TRANSFAC - 4788865 4788881 7.0E-06 ATTTTTTAATTTTTTTG 17 V_P53_05_M01655 TRANSFAC + 4788897 4788916 1.0E-06 GAGCATGCCTGTACATGCCT 20 V_P53_05_M01655 TRANSFAC - 4788897 4788916 0.0E+00 AGGCATGTACAGGCATGCTC 20 V_P53_04_M01652 TRANSFAC + 4788897 4788916 1.0E-06 GAGCATGCCTGTACATGCCT 20 V_P53_04_M01652 TRANSFAC - 4788897 4788916 0.0E+00 AGGCATGTACAGGCATGCTC 20 V_FOX_Q2_M00809 TRANSFAC + 4793780 4793792 4.0E-06 CTGTGTTTGTTTT 13 V_P53_01_M00034 TRANSFAC + 4788897 4788916 0.0E+00 GAGCATGCCTGTACATGCCT 20 V_P53_01_M00034 TRANSFAC - 4788897 4788916 0.0E+00 AGGCATGTACAGGCATGCTC 20 V_PLZF_02_M01075 TRANSFAC + 4788862 4788890 5.0E-06 CTACAAAAAAATTAAAAAATTAGCTGAGT 29 V_OCT1_07_M00248 TRANSFAC + 4788107 4788118 2.0E-06 CATATGCAAATT 12 V_P63_01_M01656 TRANSFAC + 4788897 4788916 0.0E+00 GAGCATGCCTGTACATGCCT 20 V_P63_01_M01656 TRANSFAC - 4788897 4788916 1.0E-06 AGGCATGTACAGGCATGCTC 20 V_DMRT2_01_M01147 TRANSFAC + 4789665 4789680 4.0E-06 AATTATACTACAATTA 16 V_SRF_06_M02916 TRANSFAC + 4788862 4788878 8.0E-06 CTACAAAAAAATTAAAA 17 V_VAX1_01_M01397 TRANSFAC + 4788748 4788763 2.0E-06 AATTTAATTACCCTTG 16 V_FOXJ2_01_M00422 TRANSFAC - 4793778 4793795 1.0E-06 CTGAAAACAAACACAGAA 18 V_VDR_Q3_M00444 TRANSFAC + 4792253 4792267 1.0E-05 GGGGCAAAGAGGTGT 15 V_SOX18_04_M02905 TRANSFAC + 4788026 4788041 6.0E-06 AAACTGAATTCAACAA 16 V_HOXD8_01_M01432 TRANSFAC + 4788866 4788882 4.0E-06 AAAAAAATTAAAAAATT 17 V_HOXD8_01_M01432 TRANSFAC - 4788867 4788883 6.0E-06 TAATTTTTTAATTTTTT 17 V_SOX1_03_M02802 TRANSFAC - 4788171 4788186 9.0E-06 CATCAATTGAAATGAT 16 V_SOX1_03_M02802 TRANSFAC + 4788867 4788882 9.0E-06 AAAAAATTAAAAAATT 16 V_SOX1_03_M02802 TRANSFAC + 4797623 4797638 6.0E-06 TATCCATTCAAAATGT 16 V_MOX1_01_M01443 TRANSFAC + 4788748 4788763 3.0E-06 AATTTAATTACCCTTG 16 V_PAX4_02_M00377 TRANSFAC + 4788867 4788877 5.0E-06 AAAAAATTAAA 11 V_PAX4_02_M00377 TRANSFAC + 4788875 4788885 2.0E-06 AAAAAATTAGC 11 V_MEF2_01_M00006 TRANSFAC - 4793762 4793777 2.0E-06 TTTTAAAAATTTCTTT 16 V_HOXD3_01_M01338 TRANSFAC - 4788748 4788763 3.0E-06 CAAGGGTAATTAAATT 16 V_LHX4_01_M01421 TRANSFAC + 4788747 4788763 4.0E-06 AAATTTAATTACCCTTG 17 V_LHX5_01_M01353 TRANSFAC + 4788865 4788881 9.0E-06 CAAAAAAATTAAAAAAT 17 V_CEBP_Q2_01_M00912 TRANSFAC - 4788114 4788125 1.0E-06 ATTACTTAATTT 12 V_HOXA10_01_M01464 TRANSFAC - 4788746 4788761 2.0E-06 AGGGTAATTAAATTTC 16 V_HMX3_02_M01413 TRANSFAC + 4788865 4788881 2.0E-06 CAAAAAAATTAAAAAAT 17 V_CMAF_01_M01070 TRANSFAC + 4797640 4797658 5.0E-06 AGTAGTGCTGATGTAGAAA 19 V_HOXD10_01_M01375 TRANSFAC + 4788040 4788056 6.0E-06 AACACATTAAAAAGATC 17 V_HOXD10_01_M01375 TRANSFAC - 4788745 4788761 1.0E-06 AGGGTAATTAAATTTCT 17 V_HOXD10_01_M01375 TRANSFAC + 4792266 4792282 3.0E-06 GTCTCAATAAAATAAGC 17 V_PBX1_04_M01357 TRANSFAC + 4787958 4787974 2.0E-06 AGACACATCAAATAAAG 17 V_DMRT1_01_M01146 TRANSFAC + 4797508 4797522 4.0E-06 TGGAGACATTTTTGG 15 V_ARID5A_04_M02840 TRANSFAC + 4788728 4788744 2.0E-06 ATTCAAATAGGAAATGA 17 V_PAX4_04_M00380 TRANSFAC - 4793753 4793782 6.0E-06 CAGAATTTTAAAAATTTCTTTATCCACACC 30 V_PAX6_01_M00097 TRANSFAC - 4788176 4788196 8.0E-06 GCTTTTTCAGCATCAATTGAA 21 V_HOX13_02_M01452 TRANSFAC - 4788746 4788761 5.0E-06 AGGGTAATTAAATTTC 16 V_HOX13_02_M01452 TRANSFAC + 4788748 4788763 2.0E-06 AATTTAATTACCCTTG 16 V_HOXC9_01_M01416 TRANSFAC - 4788747 4788762 0.0E+00 AAGGGTAATTAAATTT 16 V_HOXC8_01_M01321 TRANSFAC + 4788746 4788761 1.0E-05 GAAATTTAATTACCCT 16 V_HOXC8_01_M01321 TRANSFAC - 4788748 4788763 1.0E-06 CAAGGGTAATTAAATT 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.