Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

CDK2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 1017 cyclin-dependent kinase 2 chr12 + 56355555 - 56361055 56360555 Transcription Factor Binding Sites   Download all TFBS in the CDK2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXO4_forkhead_DBD_dimeric_14_1 SELEX + 56360856 56360869 2.0E-06 AGAAACAAGTTGAC 14 FOXO4_forkhead_DBD_dimeric_14_1 SELEX - 56360856 56360869 2.0E-06 GTCAACTTGTTTCT 14 Sox17_MA0078.1 JASPAR + 56364665 56364673 2.0E-06 TTCATTGTC 9 SOX10_HMG_full_dimeric_15_3 SELEX - 56364655 56364669 7.0E-06 ATGAAGTTCCTTCAT 15 SPIC_ETS_full_monomeric_14_1 SELEX - 56364804 56364817 2.0E-06 GGAAAGAGGAAATA 14 NR4A2_nuclearreceptor_full_monomeric_11_1 SELEX - 56364733 56364743 5.0E-06 GTAAAAGGTCA 11 NR2F1_nuclearreceptor_DBD_monomeric_13_1 SELEX - 56364729 56364741 6.0E-06 AAAAGGTCAGCAG 13 EBF1_EBF_full_dimeric_14_1 SELEX + 56364845 56364858 7.0E-06 ATTCCCTGGAGATT 14 SOX9_HMG_full_dimeric_17_3 SELEX - 56364654 56364670 4.0E-06 AATGAAGTTCCTTCATC 17 EWSR1-FLI1_MA0149.1 JASPAR + 56360999 56361016 4.0E-06 GGAAGAGAGCAGGGAGGG 18 EWSR1-FLI1_MA0149.1 JASPAR + 56364624 56364641 1.0E-06 TGGGGGAAGGAAGGAGGG 18 SOX7_HMG_full_dimeric_17_2 SELEX - 56364654 56364670 8.0E-06 AATGAAGTTCCTTCATC 17 SOX15_HMG_full_dimeric_15_3 SELEX - 56364655 56364669 9.0E-06 ATGAAGTTCCTTCAT 15 TFAP2A_TFAP_DBD_dimeric_11_1 SELEX - 56360459 56360469 8.0E-06 CGCCCCAGGCA 11 SPIB_ETS_DBD_monomeric_14_1 SELEX - 56364804 56364817 4.0E-06 GGAAAGAGGAAATA 14 HSF4_HSF_DBD_trimeric_13_1 SELEX + 56364876 56364888 7.0E-06 TTCCGGATCTTTC 13 SP4_C2H2_full_monomeric_17_1 SELEX - 56360562 56360578 6.0E-06 GAGGCCCCGCCCCTGCT 17 SOX18_HMG_full_dimeric_15_3 SELEX - 56364655 56364669 3.0E-06 ATGAAGTTCCTTCAT 15 FOXC1_MA0032.1 JASPAR + 56361718 56361725 7.0E-06 AGTAAGTA 8 FOXO3_forkhead_full_dimeric_14_1 SELEX + 56360856 56360869 3.0E-06 AGAAACAAGTTGAC 14 FOXO3_forkhead_full_dimeric_14_1 SELEX - 56360856 56360869 6.0E-06 GTCAACTTGTTTCT 14 Tcfap2a_TFAP_DBD_dimeric_11_1 SELEX - 56360459 56360469 1.0E-05 CGCCCCAGGCA 11 FOXO1_forkhead_DBD_dimeric_14_1 SELEX + 56360856 56360869 5.0E-06 AGAAACAAGTTGAC 14 FOXO1_forkhead_DBD_dimeric_14_1 SELEX - 56360856 56360869 5.0E-06 GTCAACTTGTTTCT 14 V_DMRT4_01_M01149 TRANSFAC + 56360614 56360626 4.0E-06 ATTGTTTCAAGTT 13 V_ATF_01_M00017 TRANSFAC + 56360509 56360522 3.0E-06 CTCTGACGTTGACC 14 V_ATF_01_M00017 TRANSFAC - 56364780 56364793 7.0E-06 CGTTGACGTCAGTC 14 V_SOX14_05_M02902 TRANSFAC - 56364663 56364677 7.0E-06 CTGAGACAATGAAGT 15 V_MAX_Q6_M01830 TRANSFAC + 56360901 56360912 1.0E-05 CTGGACACGTGA 12 V_DMRT3_01_M01148 TRANSFAC + 56360289 56360303 5.0E-06 AGGTCGATACATATT 15 V_DMRT3_01_M01148 TRANSFAC - 56360612 56360626 9.0E-06 AACTTGAAACAATGT 15 V_COE1_Q6_M01871 TRANSFAC - 56364843 56364856 4.0E-06 TCTCCAGGGAATAG 14 V_ETS_B_M00340 TRANSFAC - 56364801 56364814 8.0E-06 AAGAGGAAATACCA 14 V_SPIB_02_M02041 TRANSFAC - 56364804 56364813 4.0E-06 AGAGGAAATA 10 V_LMAF_Q2_M01139 TRANSFAC - 56364729 56364737 6.0E-06 GGTCAGCAG 9 V_SP1_Q6_01_M00931 TRANSFAC + 56360566 56360575 4.0E-06 GGGGCGGGGC 10 V_NR2F2_03_M02783 TRANSFAC - 56364729 56364744 7.0E-06 AGTAAAAGGTCAGCAG 16 V_HNF4ALPHA_Q6_M00638 TRANSFAC + 56364732 56364744 3.0E-06 CTGACCTTTTACT 13 V_AP2_Q6_01_M00915 TRANSFAC - 56360531 56360543 0.0E+00 CCGCCCCCAGGCC 13 V_PU1_Q4_M01172 TRANSFAC + 56364798 56364816 1.0E-06 TCTTGGTATTTCCTCTTTC 19 V_PU1_Q4_M01172 TRANSFAC + 56364805 56364823 8.0E-06 ATTTCCTCTTTCCCCATTT 19 V_SPIC_01_M02042 TRANSFAC - 56364804 56364813 7.0E-06 AGAGGAAATA 10 V_GC_01_M00255 TRANSFAC + 56360535 56360548 9.0E-06 TGGGGGCGGAGCCA 14 V_GC_01_M00255 TRANSFAC + 56360564 56360577 4.0E-06 CAGGGGCGGGGCCT 14 V_SPDEF_03_M02811 TRANSFAC + 56364872 56364887 8.0E-06 GCTCTTCCGGATCTTT 16 V_SP1_Q6_M00196 TRANSFAC + 56360535 56360547 6.0E-06 TGGGGGCGGAGCC 13 V_SP1_Q6_M00196 TRANSFAC + 56360564 56360576 4.0E-06 CAGGGGCGGGGCC 13 V_ELF5_01_M01197 TRANSFAC - 56364804 56364814 6.0E-06 AAGAGGAAATA 11 V_NFE4_Q5_M02105 TRANSFAC - 56364707 56364718 5.0E-06 CTCCCTCCCCAG 12 V_SOX12_04_M02900 TRANSFAC - 56364663 56364678 6.0E-06 CCTGAGACAATGAAGT 16 V_SOX12_04_M02900 TRANSFAC - 56364755 56364770 5.0E-06 CTCTATACAAAGGAGT 16 V_ERBETA_Q5_M01875 TRANSFAC + 56364683 56364697 4.0E-06 GTGTGACTGACCCCA 15 V_RREB1_01_M00257 TRANSFAC + 56360962 56360975 1.0E-06 CCCCAACCCCCCAC 14 V_PBX1_05_M01967 TRANSFAC + 56364777 56364790 6.0E-06 TTTGACTGACGTCA 14 V_OCAB_Q6_M02113 TRANSFAC + 56364607 56364617 7.0E-06 ATCTGCAAAGC 11 V_PPARA_02_M00518 TRANSFAC - 56360438 56360456 8.0E-06 TTTGGTTCTTGGGGGCTAG 19 V_SP4_Q5_M01273 TRANSFAC - 56360565 56360575 8.0E-06 GCCCCGCCCCT 11 V_ELF1_Q6_M00746 TRANSFAC - 56364805 56364816 0.0E+00 GAAAGAGGAAAT 12 V_HBP1_04_M02866 TRANSFAC + 56364813 56364829 4.0E-06 TTTCCCCATTTTCAGGT 17 V_CREM_Q6_M01820 TRANSFAC - 56364780 56364790 4.0E-06 TGACGTCAGTC 11 V_ATF1_Q6_M00691 TRANSFAC - 56364783 56364793 5.0E-06 CGTTGACGTCA 11 V_HAND1E47_01_M00222 TRANSFAC - 56360850 56360865 3.0E-06 ACTTGTTTCTGGCTTT 16 V_GABPBETA_Q3_M01876 TRANSFAC + 56360996 56361006 1.0E-05 ACCGGAAGAGA 11 V_CREBP1_Q2_M00179 TRANSFAC - 56364781 56364792 6.0E-06 GTTGACGTCAGT 12 V_NANOG_01_M01123 TRANSFAC + 56360469 56360480 1.0E-05 GGGATCATTTGC 12 V_HDX_01_M01333 TRANSFAC + 56360329 56360345 1.0E-06 AGTTAGAAATCAAGAAA 17 V_ATF2_Q5_M01862 TRANSFAC + 56364780 56364791 8.0E-06 GACTGACGTCAA 12 V_DMRT7_01_M01151 TRANSFAC - 56360610 56360623 0.0E+00 TTGAAACAATGTTG 14 V_NRF2_01_M00108 TRANSFAC + 56360996 56361005 1.0E-06 ACCGGAAGAG 10 V_FPM315_01_M01587 TRANSFAC + 56360480 56360491 9.0E-06 CGGGGAGGAGCG 12 V_SRF_Q5_01_M00922 TRANSFAC + 56364695 56364709 1.0E-05 CCATGAAAGGCCCTG 15 V_SRF_Q4_M00810 TRANSFAC + 56364694 56364711 6.0E-06 CCCATGAAAGGCCCTGGG 18 V_RARA_03_M02787 TRANSFAC - 56364729 56364744 8.0E-06 AGTAAAAGGTCAGCAG 16 V_DMRT2_01_M01147 TRANSFAC - 56360612 56360627 9.0E-06 CAACTTGAAACAATGT 16 V_NUR77_Q5_M01217 TRANSFAC + 56364732 56364741 9.0E-06 CTGACCTTTT 10 V_EWSR1FLI1_01_M02252 TRANSFAC + 56360999 56361016 4.0E-06 GGAAGAGAGCAGGGAGGG 18 V_EWSR1FLI1_01_M02252 TRANSFAC + 56364624 56364641 1.0E-06 TGGGGGAAGGAAGGAGGG 18 V_SP1_Q2_01_M00933 TRANSFAC - 56360565 56360574 7.0E-06 CCCCGCCCCT 10 V_SP1_Q4_01_M00932 TRANSFAC + 56360564 56360576 3.0E-06 CAGGGGCGGGGCC 13 V_TAACC_B_M00331 TRANSFAC + 56360427 56360449 3.0E-06 AAGAAACTTGTCTAGCCCCCAAG 23 V_ATF_B_M00338 TRANSFAC - 56364780 56364791 2.0E-06 TTGACGTCAGTC 12 V_ATF_B_M00338 TRANSFAC + 56364782 56364793 2.0E-06 CTGACGTCAACG 12 V_DMRT1_01_M01146 TRANSFAC + 56360607 56360621 0.0E+00 CGGCAACATTGTTTC 15 V_DMRT1_01_M01146 TRANSFAC - 56360609 56360623 0.0E+00 TTGAAACAATGTTGC 15 V_SOX9_Q4_M01284 TRANSFAC - 56364756 56364766 6.0E-06 ATACAAAGGAG 11 V_SPI1_02_M02043 TRANSFAC - 56364804 56364813 3.0E-06 AGAGGAAATA 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.