Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

KCNK7 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 10089 potassium channel, subfamily K, member 7 chr11 - 65362967 - 65368467 65363467 Transcription Factor Binding Sites   Download all TFBS in the KCNK7 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR - 65361435 65361453 0.0E+00 AGGCCACCAGAGGGCAGCC 19 PKNOX1_MEIS_DBD_dimeric_12_1 SELEX + 65361179 65361190 1.0E-06 TGACAGCTGCCA 12 PKNOX1_MEIS_DBD_dimeric_12_1 SELEX - 65361179 65361190 1.0E-06 TGGCAGCTGTCA 12 RARA_nuclearreceptor_full_dimeric_18_1 SELEX - 65361438 65361455 5.0E-06 CAAGGCCACCAGAGGGCA 18 Tp53_p53l_DBD_dimeric_18_2 SELEX + 65360478 65360495 7.0E-06 AGCAAGCAGGGGCTTGTC 18 Tp53_p53l_DBD_dimeric_18_2 SELEX - 65360478 65360495 8.0E-06 GACAAGCCCCTGCTTGCT 18 RARG_nuclearreceptor_full_dimeric_17_1 SELEX - 65361438 65361454 6.0E-06 AAGGCCACCAGAGGGCA 17 Rarb_nuclearreceptor_DBD_dimeric_18_1 SELEX - 65361438 65361455 3.0E-06 CAAGGCCACCAGAGGGCA 18 Pknox2_MEIS_DBD_dimeric_12_1 SELEX + 65361179 65361190 2.0E-06 TGACAGCTGCCA 12 Pknox2_MEIS_DBD_dimeric_12_1 SELEX - 65361179 65361190 2.0E-06 TGGCAGCTGTCA 12 TGIF2_MEIS_DBD_dimeric_12_1 SELEX + 65361179 65361190 1.0E-06 TGACAGCTGCCA 12 TGIF2_MEIS_DBD_dimeric_12_1 SELEX - 65361179 65361190 1.0E-06 TGGCAGCTGTCA 12 Klf4_MA0039.2 JASPAR - 65362721 65362730 3.0E-06 AGGGTGTGGC 10 Tcfcp2l1_MA0145.1 JASPAR - 65361469 65361482 4.0E-06 CCAGCTAGAACCTG 14 Meis3_MEIS_DBD_dimeric_12_1 SELEX + 65361179 65361190 2.0E-06 TGACAGCTGCCA 12 Meis3_MEIS_DBD_dimeric_12_1 SELEX - 65361179 65361190 2.0E-06 TGGCAGCTGTCA 12 Foxc1_forkhead_DBD_dimeric_11_1 SELEX - 65359954 65359964 3.0E-06 ACAAATAAATA 11 RARG_nuclearreceptor_DBD_dimeric_17_2 SELEX - 65361438 65361454 5.0E-06 AAGGCCACCAGAGGGCA 17 FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 65359954 65359964 3.0E-06 ACAAATAAATA 11 RARG_nuclearreceptor_DBD_dimeric_17_1 SELEX - 65361438 65361454 4.0E-06 AAGGCCACCAGAGGGCA 17 PRDM4_C2H2_full_monomeric_13_1 SELEX - 65361446 65361458 4.0E-06 GTTCAAGGCCACC 13 MIZF_MA0131.1 JASPAR + 65359456 65359465 9.0E-06 AAACGTCCGC 10 Klf12_C2H2_DBD_monomeric_15_1 SELEX + 65362720 65362734 2.0E-06 GGCCACACCCTTCCT 15 Stat3_MA0144.1 JASPAR - 65362729 65362738 6.0E-06 TGCCAGGAAG 10 Stat3_MA0144.1 JASPAR + 65363088 65363097 1.0E-05 TGCCTGGAAG 10 TGIF2LX_MEIS_full_dimeric_12_1 SELEX + 65361179 65361190 2.0E-06 TGACAGCTGCCA 12 TGIF2LX_MEIS_full_dimeric_12_1 SELEX - 65361179 65361190 4.0E-06 TGGCAGCTGTCA 12 Meis2_MEIS_DBD_dimeric_12_1 SELEX + 65361179 65361190 2.0E-06 TGACAGCTGCCA 12 Meis2_MEIS_DBD_dimeric_12_1 SELEX - 65361179 65361190 3.0E-06 TGGCAGCTGTCA 12 REST_MA0138.2 JASPAR + 65359468 65359488 9.0E-06 AGCAGCACCGAGAGCAGCTCC 21 ZNF524_C2H2_full_monomeric_14_1 SELEX + 65359654 65359667 3.0E-06 CTCGAACCCGTTCT 14 TGIF1_MEIS_DBD_dimeric_12_1 SELEX + 65361179 65361190 1.0E-06 TGACAGCTGCCA 12 TGIF1_MEIS_DBD_dimeric_12_1 SELEX - 65361179 65361190 1.0E-06 TGGCAGCTGTCA 12 V_MYB_Q6_M00183 TRANSFAC - 65359736 65359745 9.0E-06 CTCAACTGCC 10 V_MINI20_B_M00324 TRANSFAC + 65363125 65363145 6.0E-06 TGAAGCCTGCATGCAGGAGGC 21 V_MTF1_01_M01242 TRANSFAC - 65361425 65361444 8.0E-06 GAGGGCAGCCTTCTGCGGAA 20 V_XFD1_01_M00267 TRANSFAC - 65359950 65359963 2.0E-06 CAAATAAATACGGC 14 V_MAX_Q6_M01830 TRANSFAC - 65361207 65361218 3.0E-06 CCGCCCACGTGC 12 V_XPF1_Q6_M00684 TRANSFAC + 65360590 65360599 1.0E-06 TCTGAAGAAC 10 V_NRSF_Q4_M01028 TRANSFAC - 65359466 65359484 0.0E+00 CTGCTCTCGGTGCTGCTGA 19 V_MYB_03_M02883 TRANSFAC - 65362731 65362746 9.0E-06 ACTTCAACTGCCAGGA 16 V_LRH1_Q5_01_M02098 TRANSFAC - 65361448 65361458 1.0E-06 GTTCAAGGCCA 11 V_IK_Q5_M01169 TRANSFAC + 65359588 65359597 5.0E-06 GTTGGGAGGG 10 V_GKLF_02_M01588 TRANSFAC + 65362721 65362732 0.0E+00 GCCACACCCTTC 12 V_NERF_Q2_M00531 TRANSFAC - 65362721 65362738 0.0E+00 TGCCAGGAAGGGTGTGGC 18 V_NRSE_B_M00325 TRANSFAC + 65359465 65359485 1.0E-06 CTCAGCAGCACCGAGAGCAGC 21 RXRA_VDR_MA0074.1 JASPAR - 65360455 65360469 6.0E-06 AGGTGACCGAGTTCA 15 V_KLF7_03_M02773 TRANSFAC + 65359629 65359644 6.0E-06 TGGACCCCGCCCAACG 16 V_CTCF_02_M01259 TRANSFAC - 65361437 65361456 0.0E+00 TCAAGGCCACCAGAGGGCAG 20 V_STAT3_03_M01595 TRANSFAC - 65362725 65362740 5.0E-06 ACTGCCAGGAAGGGTG 16 V_CTCF_01_M01200 TRANSFAC - 65361435 65361454 0.0E+00 AAGGCCACCAGAGGGCAGCC 20 V_GCNF_01_M00526 TRANSFAC - 65361446 65361463 2.0E-06 GGCCAGTTCAAGGCCACC 18 V_HFH8_01_M00294 TRANSFAC + 65359951 65359963 9.0E-06 CCGTATTTATTTG 13 V_LRH1_Q5_M01142 TRANSFAC + 65361447 65361458 2.0E-06 GTGGCCTTGAAC 12 V_MYOD_Q6_02_M02100 TRANSFAC - 65361179 65361187 4.0E-06 CAGCTGTCA 9 V_BDP1_01_M01796 TRANSFAC + 65359651 65359662 6.0E-06 TGACTCGAACCC 12 V_NRSF_01_M00256 TRANSFAC + 65359465 65359485 4.0E-06 CTCAGCAGCACCGAGAGCAGC 21 V_REST_02_M02256 TRANSFAC + 65359468 65359488 9.0E-06 AGCAGCACCGAGAGCAGCTCC 21 V_RNF96_01_M01199 TRANSFAC - 65360506 65360515 7.0E-06 GCCCGCGGCC 10 V_VDRRXR_01_M01202 TRANSFAC - 65360455 65360469 6.0E-06 AGGTGACCGAGTTCA 15 V_AP2_Q3_M00800 TRANSFAC + 65360506 65360521 9.0E-06 GGCCGCGGGCGGCAGG 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.