Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

PDCD7 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 10081 programmed cell death 7 chr15 - 65425674 - 65431174 65426174 Transcription Factor Binding Sites   Download all TFBS in the PDCD7 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 65426478 65426495 2.0E-06 AAGATAAATAGTTAAATA 18 FOXB1_forkhead_DBD_dimeric_18_1 SELEX - 65426478 65426495 4.0E-06 TATTTAACTATTTATCTT 18 POU4F2_POU_full_monomeric_16_1 SELEX + 65426481 65426496 5.0E-06 ATAAATAGTTAAATAG 16 KLF16_C2H2_DBD_monomeric_11_1 SELEX + 65423456 65423466 6.0E-06 GCCACTCCCCC 11 Zfp652_C2H2_DBD_monomeric_13_1 SELEX + 65426481 65426493 6.0E-06 ATAAATAGTTAAA 13 EGR1_C2H2_full_monomeric_14_1 SELEX - 65426065 65426078 9.0E-06 ACCGCCCCCGCAGC 14 POU4F3_POU_DBD_monomeric_16_1 SELEX + 65426481 65426496 8.0E-06 ATAAATAGTTAAATAG 16 Egr1_C2H2_mouse-DBD_mutant_DBD_monomeric_16_1 SELEX - 65426064 65426079 9.0E-06 CACCGCCCCCGCAGCC 16 POU6F2_POU_DBD_dimeric_16_1 SELEX + 65426481 65426496 5.0E-06 ATAAATAGTTAAATAG 16 HNF1A_homeodomain_full_dimeric_15_1 SELEX + 65426480 65426494 1.0E-05 GATAAATAGTTAAAT 15 ELK1_ETS_full_dimeric_17_1 SELEX - 65426176 65426192 1.0E-06 CACTTCCGTCGGAAGGT 17 Egr3_C2H2_DBD_monomeric_15_1 SELEX - 65426064 65426078 9.0E-06 ACCGCCCCCGCAGCC 15 V_HNF3B_01_M00131 TRANSFAC - 65426478 65426492 5.0E-06 TTAACTATTTATCTT 15 V_DBX1_01_M01483 TRANSFAC - 65426479 65426495 7.0E-06 TATTTAACTATTTATCT 17 V_GAF_Q6_M01209 TRANSFAC - 65426148 65426158 3.0E-06 CAGATTCCTGT 11 V_CDX2_Q5_01_M01659 TRANSFAC + 65426282 65426292 1.0E-06 TTCATAAATAC 11 V_FLI1_Q6_M01208 TRANSFAC + 65426184 65426194 8.0E-06 ACGGAAGTGAC 11 V_E2F1_Q3_01_M00938 TRANSFAC - 65425461 65425476 5.0E-06 TGCGCGCGGAACTGGC 16 V_AP4_Q6_02_M01860 TRANSFAC - 65426458 65426470 8.0E-06 TCAGCTGCAGCCG 13 V_GM497_04_M02864 TRANSFAC + 65425269 65425284 5.0E-06 TCCTGCACACACTTCA 16 V_NKX62_Q2_M00489 TRANSFAC + 65426478 65426489 7.0E-06 AAGATAAATAGT 12 V_ETV7_01_M02071 TRANSFAC + 65425971 65425980 7.0E-06 CCCGGAAAAG 10 V_SP4_03_M02810 TRANSFAC - 65425953 65425969 5.0E-06 GCCTCCGCCCCCTTCCT 17 V_EGR1_Q6_M01873 TRANSFAC + 65426068 65426077 4.0E-06 GCGGGGGCGG 10 V_NFE4_Q5_M02105 TRANSFAC + 65425394 65425405 6.0E-06 GACCCTCTCCAG 12 V_OCT1_04_M00138 TRANSFAC + 65426479 65426501 5.0E-06 AGATAAATAGTTAAATAGAAAAA 23 V_SP1SP3_Q4_M01219 TRANSFAC - 65425955 65425965 4.0E-06 CCGCCCCCTTC 11 V_NKX32_02_M01482 TRANSFAC - 65426243 65426259 9.0E-06 ACTGCCCACTTATGCAC 17 V_CNOT3_01_M01253 TRANSFAC + 65425508 65425517 4.0E-06 GGCCGCGCCG 10 V_PLAG1_01_M01778 TRANSFAC + 65425945 65425960 4.0E-06 GAGGCTGAAGGAAGGG 16 V_EGR1_06_M02744 TRANSFAC - 65426065 65426078 4.0E-06 ACCGCCCCCGCAGC 14 V_FOXJ2_01_M00422 TRANSFAC + 65426475 65426492 4.0E-06 TGGAAGATAAATAGTTAA 18 V_TCF11MAFG_01_M00284 TRANSFAC + 65431157 65431178 9.0E-06 GAGACATGAGACATCAGTTAGT 18

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.