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CDH9 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 1007 cadherin 9, type 2 (T1-cadherin) chr5 - 27038189 - 27043689 27038689 Transcription Factor Binding Sites   Download all TFBS in the CDH9 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints Sox1_HMG_DBD_dimeric_14_1 SELEX + 27038673 27038686 3.0E-06 TGAATCTTCATGCA 14 TBP_MA0108.2 JASPAR - 27038646 27038660 0.0E+00 CTATAAAAAGGGAAG 15 STAT1_MA0137.2 JASPAR - 27034799 27034813 0.0E+00 CATTTCCAAGAAACA 15 SOX8_HMG_DBD_dimeric_14_1 SELEX + 27038673 27038686 8.0E-06 TGAATCTTCATGCA 14 SPIB_ETS_DBD_monomeric_14_1 SELEX + 27040033 27040046 4.0E-06 AAAAAAGGGAACTT 14 RUNX3_RUNX_full_monomeric_10_1 SELEX - 27033711 27033720 9.0E-06 AAACCGCAGA 10 FOXD3_forkhead_DBD_dimeric_14_1 SELEX - 27034806 27034819 1.0E-05 TATTAACATTTCCA 14 NFATC1_NFAT_full_dimeric_15_1 SELEX - 27033682 27033696 1.0E-05 TTCCTGTTAAGGAAA 8 POU3F1_POU_DBD_monomeric_12_1 SELEX + 27034809 27034820 9.0E-06 AAATGTTAATAT 12 Pou5f1_MA0142.1 JASPAR + 27034804 27034818 7.0E-06 CTTGGAAATGTTAAT 15 SPI1_ETS_full_monomeric_14_1 SELEX + 27040033 27040046 4.0E-06 AAAAAAGGGAACTT 14 V_DMRT4_01_M01149 TRANSFAC - 27033695 27033707 0.0E+00 AATGTAACAGTTT 13 V_SPI1_01_M01203 TRANSFAC + 27040033 27040049 3.0E-06 AAAAAAGGGAACTTCAT 17 V_STAT5A_Q6_M01890 TRANSFAC + 27034798 27034810 4.0E-06 GTGTTTCTTGGAA 13 V_STAT5A_Q6_M01890 TRANSFAC - 27034802 27034814 1.0E-06 ACATTTCCAAGAA 13 V_DMRT3_01_M01148 TRANSFAC + 27033695 27033709 2.0E-06 AAACTGTTACATTTC 15 V_HMGIY_Q3_M01010 TRANSFAC + 27040043 27040057 7.0E-06 ACTTCATTTTGTTCA 15 V_POU5F1_02_M02245 TRANSFAC + 27034804 27034818 7.0E-06 CTTGGAAATGTTAAT 15 V_CBF_02_M01080 TRANSFAC + 27033708 27033723 6.0E-06 TCCTCTGCGGTTTACT 16 V_STAT5B_01_M00459 TRANSFAC + 27034799 27034813 0.0E+00 TGTTTCTTGGAAATG 15 V_STAT5B_01_M00459 TRANSFAC - 27034799 27034813 5.0E-06 CATTTCCAAGAAACA 15 V_PRX2_Q2_M02115 TRANSFAC - 27034814 27034822 4.0E-06 TCATATTAA 9 V_PU1_Q4_M01172 TRANSFAC + 27038638 27038656 2.0E-06 GTCCTTCTCTTCCCTTTTT 19 V_HOXD13_01_M01404 TRANSFAC + 27033723 27033738 4.0E-06 TTACCATTAAAATTTA 16 V_STAT4_Q4_M01666 TRANSFAC - 27034797 27034810 2.0E-06 TTCCAAGAAACACC 14 V_HOXB13_01_M01467 TRANSFAC + 27033723 27033738 8.0E-06 TTACCATTAAAATTTA 16 V_TATA_01_M00252 TRANSFAC - 27038646 27038660 0.0E+00 CTATAAAAAGGGAAG 15 V_NKX61_01_M00424 TRANSFAC - 27033723 27033735 6.0E-06 ATTTTAATGGTAA 13 V_STAT5A_02_M00460 TRANSFAC - 27034787 27034810 3.0E-06 TTCCAAGAAACACCTCTCCAAACA 24 V_TATA_C_M00216 TRANSFAC - 27038652 27038661 2.0E-06 ACTATAAAAA 10 V_OCT1_04_M00138 TRANSFAC + 27033720 27033742 8.0E-06 TACTTACCATTAAAATTTAAAAA 23 V_OCT1_04_M00138 TRANSFAC + 27034803 27034825 8.0E-06 TCTTGGAAATGTTAATATGAAAT 23 V_SPIB_01_M01204 TRANSFAC + 27040033 27040049 2.0E-06 AAAAAAGGGAACTTCAT 17 V_VMYB_01_M00003 TRANSFAC - 27038616 27038625 2.0E-06 AACAACGGAA 10 V_STAT4_Q5_M02117 TRANSFAC - 27034801 27034810 5.0E-06 TTCCAAGAAA 10 V_GATA4_Q3_M00632 TRANSFAC + 27040031 27040042 3.0E-06 AAAAAAAAGGGA 12 V_STAT1STAT1_Q3_M01212 TRANSFAC - 27034800 27034812 1.0E-06 ATTTCCAAGAAAC 13 V_STAT5A_01_M00457 TRANSFAC + 27034799 27034813 1.0E-06 TGTTTCTTGGAAATG 15 V_STAT5A_01_M00457 TRANSFAC - 27034799 27034813 1.0E-06 CATTTCCAAGAAACA 15 V_HOXD10_01_M01375 TRANSFAC + 27033722 27033738 9.0E-06 CTTACCATTAAAATTTA 17 V_STAT1_05_M01260 TRANSFAC + 27034799 27034820 0.0E+00 TGTTTCTTGGAAATGTTAATAT 22 V_DMRT5_01_M01150 TRANSFAC - 27033694 27033708 1.0E-06 AAATGTAACAGTTTC 15 V_OCT4_01_M01125 TRANSFAC + 27034804 27034818 1.0E-05 CTTGGAAATGTTAAT 15

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