Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
100507203 small leucine-rich protein 1 chr6 +131143544 - 131149044 131148544

Transcription Factor Binding Sites

 
Download all TFBS in the promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
TBX20_TBX_full_monomeric_11_1 SELEX - 131150853 131150863 9.0E-06 GAAGTGTGAAG 11
THRB_nuclearreceptor_DBD_dimeric_20_1 SELEX + 131146256 131146275 3.0E-06 CTGAGCTCAGGTCAGGTCAT 20
THRB_nuclearreceptor_DBD_dimeric_20_1 SELEX - 131146256 131146275 0.0E+00 ATGACCTGACCTGAGCTCAG 20
POU2F1_POU_DBD_dimeric_14_1 SELEX + 131148298 131148311 5.0E-06 AAAGAATATACATA 14
EMX2_homeodomain_DBD_dimeric_14_1 SELEX + 131147361 131147374 9.0E-06 TATTTTGTAAATTA 14
EMX2_homeodomain_DBD_dimeric_14_1 SELEX - 131147361 131147374 4.0E-06 TAATTTACAAAATA 14
NR2E1_nuclearreceptor_full_monomeric_9_1 SELEX - 131144020 131144028 7.0E-06 AGAAGTCAA 9
PDX1_homeodomain_DBD_dimeric_18_1 SELEX + 131143957 131143974 2.0E-06 GCAATGATTAACAATTAG 18
IRX2_homeodomain_DBD_dimeric_12_1 SELEX + 131148305 131148316 6.0E-06 ATACATAACAAC 12
POU5F1P1_POU_DBD_monomeric_9_1 SELEX + 131148513 131148521 9.0E-06 TATTTAAAT 9
POU5F1P1_POU_DBD_monomeric_9_1 SELEX - 131148514 131148522 9.0E-06 TATTTAAAT 9
SOX8_HMG_full_dimeric_17_1 SELEX - 131150781 131150797 1.0E-06 TTTCAATTGTATTGAGT 17
POU1F1_POU_DBD_monomeric_14_1 SELEX + 131147362 131147375 3.0E-06 ATTTTGTAAATTAG 14
Esrrb_MA0141.1 JASPAR + 131148376 131148387 4.0E-06 TTCCCAAGGTCA 12
Sox1_HMG_DBD_dimeric_13_1 SELEX + 131150783 131150795 1.0E-06 TCAATACAATTGA 13
Sox1_HMG_DBD_dimeric_13_1 SELEX - 131150783 131150795 0.0E+00 TCAATTGTATTGA 13
BARHL2_homeodomain_full_dimeric_16_1 SELEX - 131143958 131143973 6.0E-06 TAATTGTTAATCATTG 16
EOMES_TBX_DBD_monomeric_13_1 SELEX - 131150851 131150863 8.0E-06 GAAGTGTGAAGAA 13
POU3F3_POU_DBD_monomeric_13_1 SELEX + 131147362 131147374 3.0E-06 ATTTTGTAAATTA 13
POU2F3_POU_DBD_dimeric_12_1 SELEX + 131148299 131148310 8.0E-06 AAGAATATACAT 12
HNF4A_nuclearreceptor_full_dimeric_16_1 SELEX + 131148521 131148536 4.0E-06 TAGAGCAAAGTCCACA 16
MAFK_bZIP_full_dimeric_15_1 SELEX - 131147300 131147314 1.0E-05 ATGAAGAGTTAGCAA 15
ESRRG_nuclearreceptor_full_monomeric_10_1 SELEX + 131148379 131148388 4.0E-06 CCAAGGTCAT 10
Lhx3_MA0135.1 JASPAR - 131148510 131148522 6.0E-06 TATTTAAATAGTC 13
MAFK_bZIP_DBD_dimeric_21_1 SELEX + 131147297 131147317 5.0E-06 AAGTTGCTAACTCTTCATTGA 21
SOX14_HMG_DBD_dimeric_12_1 SELEX + 131150783 131150794 5.0E-06 TCAATACAATTG 12
TEAD3_TEA_DBD_dimeric_17_1 SELEX - 131143947 131143963 4.0E-06 TCATTGCACAAATACCA 17
Msx3_homeodomain_DBD_dimeric_18_1 SELEX + 131148443 131148460 6.0E-06 TCAATTCCTCTACAATTA 18
TBX15_TBX_DBD_dimeric_19_1 SELEX - 131147375 131147393 3.0E-06 AGCTGTAAAGTTTGCACCC 19
HESX1_homeodomain_DBD_dimeric_15_1 SELEX + 131143960 131143974 1.0E-06 ATGATTAACAATTAG 15
HESX1_homeodomain_DBD_dimeric_15_1 SELEX - 131143960 131143974 0.0E+00 CTAATTGTTAATCAT 15
POU3F1_POU_DBD_monomeric_12_1 SELEX - 131148301 131148312 9.0E-06 TTATGTATATTC 12
LHX9_homeodomain_DBD_dimeric_13_1 SELEX + 131143961 131143973 2.0E-06 TGATTAACAATTA 13
LHX9_homeodomain_DBD_dimeric_13_1 SELEX - 131143961 131143973 2.0E-06 TAATTGTTAATCA 13
Esrra_nuclearreceptor_DBD_monomeric_11_1 SELEX + 131148378 131148388 5.0E-06 CCCAAGGTCAT 11
MAFG_bZIP_full_dimeric_21_1 SELEX + 131147297 131147317 9.0E-06 AAGTTGCTAACTCTTCATTGA 21
POU5F1P1_POU_DBD_monomeric_12_1 SELEX + 131148299 131148310 1.0E-05 AAGAATATACAT 12
Pou5f1_MA0142.1 JASPAR + 131147358 131147372 2.0E-06 TATTATTTTGTAAAT 15
Pou5f1_MA0142.1 JASPAR - 131148303 131148317 7.0E-06 TGTTGTTATGTATAT 15
HNF4A_MA0114.1 JASPAR + 131148522 131148534 1.0E-06 AGAGCAAAGTCCA 13
ESRRB_nuclearreceptor_DBD_monomeric_11_1 SELEX + 131148379 131148389 2.0E-06 CCAAGGTCATT 11
TEAD1_TEA_full_dimeric_17_1 SELEX - 131143947 131143963 3.0E-06 TCATTGCACAAATACCA 17
SRY_HMG_DBD_dimeric_13_1 SELEX + 131150783 131150795 1.0E-06 TCAATACAATTGA 13
SRY_HMG_DBD_dimeric_13_1 SELEX - 131150783 131150795 9.0E-06 TCAATTGTATTGA 13
Mafb_bZIP_DBD_dimeric_18_1 SELEX + 131147228 131147245 9.0E-06 AATGCTGACTTAAACTCA 18
EMX1_homeodomain_DBD_dimeric_14_1 SELEX - 131147361 131147374 9.0E-06 TAATTTACAAAATA 14
MSX1_homeodomain_DBD_dimeric_18_1 SELEX + 131148443 131148460 9.0E-06 TCAATTCCTCTACAATTA 18
Sox2_MA0143.1 JASPAR + 131147357 131147371 7.0E-06 TTATTATTTTGTAAA 15
FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 131148580 131148592 7.0E-06 AAGAAAACAAGTA 13
FOXL1_MA0033.1 JASPAR + 131148304 131148311 5.0E-06 TATACATA 8
HNF1A_MA0046.1 JASPAR - 131143956 131143969 4.0E-06 TGTTAATCATTGCA 14
IRX5_homeodomain_DBD_dimeric_12_1 SELEX + 131148305 131148316 4.0E-06 ATACATAACAAC 12
V_TBX15_01_M01263 TRANSFAC - 131147375 131147393 3.0E-06 AGCTGTAAAGTTTGCACCC 19
V_GATA1_Q6_M02004 TRANSFAC - 131148407 131148421 9.0E-06 TTCAGAGATAAGTAT 15
V_MAFK_03_M02776 TRANSFAC + 131147224 131147238 2.0E-06 AATGAATGCTGACTT 15
V_CEBP_Q3_M00770 TRANSFAC + 131147360 131147371 2.0E-06 TTATTTTGTAAA 12
V_SOX30_03_M02804 TRANSFAC + 131143962 131143977 4.0E-06 GATTAACAATTAGATC 16
V_HMGIY_Q3_M01010 TRANSFAC - 131148534 131148548 0.0E+00 AGTGGAATTTTTTGT 15
V_MAFB_05_M02775 TRANSFAC + 131147225 131147241 2.0E-06 ATGAATGCTGACTTAAA 17
V_POU5F1_02_M02245 TRANSFAC + 131147358 131147372 2.0E-06 TATTATTTTGTAAAT 15
V_POU5F1_02_M02245 TRANSFAC - 131148303 131148317 7.0E-06 TGTTGTTATGTATAT 15
V_SOX5_01_M00042 TRANSFAC + 131143964 131143973 9.0E-06 TTAACAATTA 10
V_MAFB_03_M02879 TRANSFAC - 131147359 131147373 2.0E-06 AATTTACAAAATAAT 15
V_FOXJ1_04_M02854 TRANSFAC + 131148307 131148321 6.0E-06 ACATAACAACAAGTT 15
V_FOXJ1_04_M02854 TRANSFAC + 131148356 131148370 2.0E-06 TTATCACAAAAAAAC 15
V_OCT1_Q5_01_M00930 TRANSFAC + 131148335 131148345 1.0E-06 TAATTTTCATT 11
V_MEF2_02_M00231 TRANSFAC + 131148507 131148528 1.0E-05 TCAGACTATTTAAATAGAGCAA 22
V_DR4_Q2_M00965 TRANSFAC - 131146258 131146274 7.0E-06 TGACCTGACCTGAGCTC 17
V_TBR2_01_M01774 TRANSFAC - 131150854 131150862 1.0E-05 AAGTGTGAA 9
V_GCNF_Q3_M02009 TRANSFAC + 131148380 131148389 9.0E-06 CAAGGTCATT 10
V_FOXO3A_Q1_M01137 TRANSFAC + 131148581 131148592 5.0E-06 AGAAAACAAGTA 12
V_CEBP_Q2_M00190 TRANSFAC - 131143950 131143963 2.0E-06 TCATTGCACAAATA 14
V_HNF4A_03_M02220 TRANSFAC + 131148522 131148534 1.0E-06 AGAGCAAAGTCCA 13
V_HFH4_01_M00742 TRANSFAC - 131148347 131148359 7.0E-06 ATAAGTTTATTTG 13
V_OCT_C_M00210 TRANSFAC + 131148334 131148346 8.0E-06 GTAATTTTCATTC 13
V_AFP1_Q6_M00616 TRANSFAC - 131147354 131147364 7.0E-06 AATAATAAGAC 11
V_CDX_Q5_M00991 TRANSFAC + 131143966 131143983 2.0E-06 AACAATTAGATCAGTAAG 18
V_MEF2A_Q6_M02024 TRANSFAC + 131148513 131148522 8.0E-06 TATTTAAATA 10
V_MEF2A_Q6_M02024 TRANSFAC - 131148513 131148522 8.0E-06 TATTTAAATA 10
V_HNF6_Q6_M00639 TRANSFAC - 131144017 131144028 1.0E-06 AGAAGTCAATAA 12
V_ELF4_04_M02850 TRANSFAC - 131147355 131147371 7.0E-06 TTTACAAAATAATAAGA 17
V_TST1_01_M00133 TRANSFAC + 131143959 131143973 7.0E-06 AATGATTAACAATTA 15
V_SOX13_03_M02797 TRANSFAC + 131143961 131143976 5.0E-06 TGATTAACAATTAGAT 16
V_SOX7_03_M02807 TRANSFAC + 131143959 131143980 2.0E-06 AATGATTAACAATTAGATCAGT 22
V_SOX7_03_M02807 TRANSFAC - 131147350 131147371 9.0E-06 TTTACAAAATAATAAGACTGGA 22
V_FOXO1_02_M00474 TRANSFAC - 131148579 131148592 8.0E-06 TACTTGTTTTCTTC 14
V_HNF4_01_B_M00411 TRANSFAC + 131148521 131148535 7.0E-06 TAGAGCAAAGTCCAC 15
V_SOX1_04_M02906 TRANSFAC - 131143962 131143976 0.0E+00 ATCTAATTGTTAATC 15
V_FOXK1_04_M02856 TRANSFAC + 131148306 131148320 3.0E-06 TACATAACAACAAGT 15
V_OCT1_05_M00161 TRANSFAC + 131148334 131148347 4.0E-06 GTAATTTTCATTCC 14
V_NFE4_Q5_M02105 TRANSFAC - 131143985 131143996 3.0E-06 CTCCCTATCCTG 12
V_NFE4_Q5_M02105 TRANSFAC + 131147343 131147354 6.0E-06 GACCCTCTCCAG 12
V_IRF3_06_M02871 TRANSFAC - 131148434 131148447 1.0E-05 ATTGAAAGGTCCAT 14
V_OCT1_04_M00138 TRANSFAC - 131148296 131148318 1.0E-06 TTGTTGTTATGTATATTCTTTCT 23
V_PPARG_03_M00528 TRANSFAC + 131148518 131148534 9.0E-06 AAATAGAGCAAAGTCCA 17
V_ERR1_Q3_M01841 TRANSFAC - 131148376 131148390 2.0E-06 GAATGACCTTGGGAA 15
V_PNR_01_M01650 TRANSFAC - 131144021 131144034 1.0E-06 AAAATCAGAAGTCA 14
V_MEF2_Q6_01_M00941 TRANSFAC - 131148516 131148527 6.0E-06 TGCTCTATTTAA 12
V_NKX3A_01_M00451 TRANSFAC - 131148405 131148416 8.0E-06 AGATAAGTATGT 12
V_HNF4A_Q6_01_M02016 TRANSFAC + 131148523 131148537 1.0E-06 GAGCAAAGTCCACAA 15
V_HB24_01_M01399 TRANSFAC + 131148510 131148524 7.0E-06 GACTATTTAAATAGA 15
V_HB24_01_M01399 TRANSFAC - 131148511 131148525 7.0E-06 CTCTATTTAAATAGT 15
V_OCT_Q6_M00795 TRANSFAC + 131148335 131148345 4.0E-06 TAATTTTCATT 11
V_HNF4A_02_M02868 TRANSFAC + 131148523 131148538 4.0E-06 GAGCAAAGTCCACAAA 16
V_SF1_Q6_01_M01132 TRANSFAC - 131148379 131148387 7.0E-06 TGACCTTGG 9
V_SOX15_03_M02799 TRANSFAC + 131143961 131143977 2.0E-06 TGATTAACAATTAGATC 17
V_CEBPA_01_M00116 TRANSFAC - 131143950 131143963 4.0E-06 TCATTGCACAAATA 14
V_CEBPA_01_M00116 TRANSFAC - 131147360 131147373 5.0E-06 AATTTACAAAATAA 14
V_CEBPA_01_M00116 TRANSFAC - 131148327 131148340 6.0E-06 AAATTACCCAACCA 14
V_HNF1_01_M00132 TRANSFAC - 131143955 131143969 2.0E-06 TGTTAATCATTGCAC 15
V_FOXL1_02_M02857 TRANSFAC - 131147356 131147371 8.0E-06 TTTACAAAATAATAAG 16
V_FOXL1_02_M02857 TRANSFAC + 131148304 131148319 5.0E-06 TATACATAACAACAAG 16
V_GATA3_02_M00350 TRANSFAC - 131148409 131148418 8.0E-06 AGAGATAAGT 10
V_NANOG_01_M01123 TRANSFAC - 131148661 131148672 8.0E-06 GAGCTCATTGCC 12
V_HNF4_Q6_01_M01031 TRANSFAC + 131148522 131148535 1.0E-06 AGAGCAAAGTCCAC 14
V_NKX61_02_M01469 TRANSFAC + 131143962 131143977 9.0E-06 GATTAACAATTAGATC 16
V_FOXO3_01_M00477 TRANSFAC - 131148579 131148592 4.0E-06 TACTTGTTTTCTTC 14
V_T3RBETA_Q6_01_M02119 TRANSFAC + 131146259 131146275 6.0E-06 AGCTCAGGTCAGGTCAT 17
V_ESRRA_03_M02748 TRANSFAC + 131148376 131148392 6.0E-06 TTCCCAAGGTCATTCCC 17
V_IRF1_Q6_01_M01881 TRANSFAC - 131147116 131147129 8.0E-06 CTCTTTCAGTTTGA 14
V_SOX14_04_M02901 TRANSFAC - 131144004 131144020 7.0E-06 ATAATGTGTGGGTCTAT 17
V_SOX2_01_M02246 TRANSFAC + 131147357 131147371 7.0E-06 TTATTATTTTGTAAA 15
V_HNF1A_Q5_M02013 TRANSFAC - 131143959 131143969 1.0E-06 TGTTAATCATT 11
V_NFE2_01_M00037 TRANSFAC + 131148463 131148473 9.0E-06 AGCTGAGTTAC 11
V_SOX12_03_M02796 TRANSFAC - 131143960 131143973 6.0E-06 TAATTGTTAATCAT 14
V_CEBP_Q2_01_M00912 TRANSFAC - 131143950 131143961 8.0E-06 ATTGCACAAATA 12
V_CEBP_Q2_01_M00912 TRANSFAC - 131147360 131147371 8.0E-06 TTTACAAAATAA 12
V_HNF4_01_M00134 TRANSFAC + 131148519 131148537 1.0E-06 AATAGAGCAAAGTCCACAA 19
V_MAFK_04_M02880 TRANSFAC + 131148535 131148549 6.0E-06 CAAAAAATTCCACTG 15
V_SOX5_07_M02909 TRANSFAC - 131143961 131143977 8.0E-06 GATCTAATTGTTAATCA 17
V_HNF1A_01_M02162 TRANSFAC - 131143956 131143969 4.0E-06 TGTTAATCATTGCA 14
V_CEBPA_Q6_M01866 TRANSFAC + 131143950 131143962 4.0E-06 TATTTGTGCAATG 13
V_CEBPA_Q6_M01866 TRANSFAC + 131147360 131147372 3.0E-06 TTATTTTGTAAAT 13
V_T3RALPHA_Q6_M01724 TRANSFAC + 131146260 131146270 8.0E-06 GCTCAGGTCAG 11
V_OCT4_01_M01125 TRANSFAC + 131147358 131147372 1.0E-06 TATTATTTTGTAAAT 15
V_OCT4_01_M01125 TRANSFAC - 131148303 131148317 4.0E-06 TGTTGTTATGTATAT 15
V_OCT4_01_M01125 TRANSFAC - 131148337 131148351 9.0E-06 ATTTGGAATGAAAAT 15
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL