Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

ERVMER34-1


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
100288413 endogenous retrovirus group MER34, member 1 chr4 -53617307 - 53622807 53617807

Transcription Factor Binding Sites

 
Download all TFBS in the ERVMER34-1 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
SOX8_HMG_DBD_dimeric_14_1 SELEX - 53621913 53621926 8.0E-06 TGCATTTGCAGTTA 14
Pax4_MA0068.1 JASPAR - 53621797 53621826 9.0E-06 GAAAAAAAGTAACAGGTTCCATCTTGCTCT 30
HOXB13_homeodomain_DBD_monomeric_11_1 SELEX - 53621693 53621703 1.0E-05 CCTCATTAAAA 11
V_DMRT4_01_M01149 TRANSFAC - 53621809 53621821 7.0E-06 AAAGTAACAGGTT 13
V_CEBPG_Q6_M00622 TRANSFAC + 53621641 53621653 6.0E-06 TCTATTAAAGAAA 13
V_FOXP3_Q4_M00992 TRANSFAC + 53621753 53621769 6.0E-06 GAGGTTCTATTTCTGGC 17
V_E2F4_Q6_M02090 TRANSFAC - 53617753 53617762 1.0E-05 GCGGGAGAAA 10
V_SP1_Q6_01_M00931 TRANSFAC + 53617662 53617671 4.0E-06 GGGGCGGGGC 10
V_LHX61_01_M01314 TRANSFAC + 53621147 53621163 1.0E-05 CACATCTAATCAGTGTA 17
V_HOXB13_01_M01467 TRANSFAC - 53621690 53621705 9.0E-06 AGCCTCATTAAAATCA 16
V_HNF1_Q6_M00790 TRANSFAC + 53621812 53621829 1.0E-05 CTGTTACTTTTTTTCAAT 18
V_ZBED6_01_M01598 TRANSFAC - 53617966 53617977 1.0E-06 CAGGCTCGCCTT 12
V_TTF1_Q6_M00794 TRANSFAC - 53621746 53621757 7.0E-06 ACCTCAAGAGAT 12
V_OCT1_04_M00138 TRANSFAC + 53621908 53621930 7.0E-06 TTTTGTAACTGCAAATGCATTCT 23
V_FOXM1_01_M00630 TRANSFAC + 53621652 53621660 7.0E-06 AAATTGAGT 9
V_POU6F1_02_M01462 TRANSFAC + 53621691 53621707 2.0E-06 GATTTTAATGAGGCTGC 17
V_IPF1_05_M01255 TRANSFAC - 53621692 53621703 2.0E-06 CCTCATTAAAAT 12
V_FPM315_01_M01587 TRANSFAC + 53617822 53617833 9.0E-06 CTGGGAGGAGGG 12
V_LHX61_02_M01422 TRANSFAC - 53621147 53621163 6.0E-06 TACACTGATTAGATGTG 17
V_BBX_03_M02739 TRANSFAC + 53621652 53621666 8.0E-06 AAATTGAGTGAAGAG 15
V_HSF_Q6_M00641 TRANSFAC - 53617859 53617871 4.0E-06 GTCCCGAAGTTTC 13
V_POU6F1_03_M01479 TRANSFAC + 53621691 53621707 4.0E-06 GATTTTAATGAGGCTGC 17
V_PIT1_Q6_M00802 TRANSFAC + 53621921 53621938 5.0E-06 AATGCATTCTTGTTGCCA 18
V_LHX4_01_M01421 TRANSFAC - 53621147 53621163 4.0E-06 TACACTGATTAGATGTG 17
V_BRN3C_01_M01408 TRANSFAC + 53621690 53621705 4.0E-06 TGATTTTAATGAGGCT 16
V_NFYA_Q5_M02106 TRANSFAC + 53617846 53617859 9.0E-06 CAGCCAATCCCAGG 14
V_DMRT1_01_M01146 TRANSFAC + 53621812 53621826 3.0E-06 CTGTTACTTTTTTTC 15
V_RFX1_02_M00281 TRANSFAC - 53621930 53621947 4.0E-06 ATGAAAATATGGCAACAA 18
V_DMRT5_01_M01150 TRANSFAC + 53621810 53621824 8.0E-06 ACCTGTTACTTTTTT 15
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL