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GNE Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 10020 glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase chr9 - 36276553 - 36282053 36277053 Transcription Factor Binding Sites   Download all TFBS in the GNE promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints Foxa2_MA0047.2 JASPAR + 36273548 36273559 5.0E-06 TGTTTACTCTTA 12 MYF6_bHLH_full_dimeric_10_1 SELEX + 36276990 36276999 9.0E-06 AGCAGCTGTT 10 FOXA1_MA0148.1 JASPAR + 36273548 36273558 1.0E-06 TGTTTACTCTT 11 FOXF2_MA0030.1 JASPAR - 36273546 36273559 7.0E-06 TAAGAGTAAACAGT 14 Pax4_MA0068.1 JASPAR + 36276782 36276811 1.0E-05 GATTTAAAACCAAAGCTTTCCTCTTCCTCT 30 TEAD1_TEA_full_monomeric_10_1 SELEX + 36277551 36277560 5.0E-06 CACATTCCAC 10 Foxq1_MA0040.1 JASPAR - 36273520 36273530 8.0E-06 TAAAGTTTATG 11 GRHL1_CP2_DBD_dimer-of-dimers_17_1 SELEX + 36273590 36273606 8.0E-06 TACCTGTTTCACCAGAT 17 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX - 36273548 36273561 9.0E-06 GCTAAGAGTAAACA 14 Ascl2_bHLH_DBD_dimeric_10_1 SELEX + 36276990 36276999 3.0E-06 AGCAGCTGTT 10 Ascl2_bHLH_DBD_dimeric_10_1 SELEX - 36276990 36276999 1.0E-06 AACAGCTGCT 10 Tcf21_bHLH_DBD_dimeric_14_1 SELEX - 36276988 36277001 5.0E-06 AAAACAGCTGCTCT 14 BCL6B_C2H2_DBD_monomeric_17_1 SELEX - 36276892 36276908 2.0E-06 TGCTTTCAAGGACCTCA 17 PRDM4_C2H2_full_monomeric_13_1 SELEX - 36276893 36276905 6.0E-06 TTTCAAGGACCTC 13 TEAD3_TEA_DBD_monomeric_8_1 SELEX + 36277552 36277559 1.0E-05 ACATTCCA 8 TEAD4_TEA_DBD_monomeric_10_1 SELEX + 36277551 36277560 4.0E-06 CACATTCCAC 10 MSC_bHLH_full_dimeric_10_1 SELEX - 36276990 36276999 4.0E-06 AACAGCTGCT 10 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 36273658 36273670 6.0E-06 AAAAAAAAAAAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 36273659 36273671 6.0E-06 AAAAAAAAAAAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 36273660 36273672 6.0E-06 AAAAAAAAAAAAA 13 NFIA_NFI_full_monomeric_10_1 SELEX - 36276690 36276699 9.0E-06 TGTGCCAAAA 10 TEAD1_MA0090.1 JASPAR + 36277551 36277562 3.0E-06 CACATTCCACTC 12 V_OSR1_03_M02784 TRANSFAC + 36277120 36277135 5.0E-06 CTGGACAGTAGCTCGA 16 V_GAF_Q6_M01209 TRANSFAC + 36277113 36277123 9.0E-06 CATATTCCTGG 11 V_IPF1_02_M01234 TRANSFAC + 36276977 36276986 5.0E-06 AAATAATGAG 10 V_TCF3_01_M01594 TRANSFAC + 36273656 36273668 7.0E-06 TCTTTTTTTTTTT 13 V_BCL6_Q3_01_M02085 TRANSFAC - 36276897 36276906 7.0E-06 CTTTCAAGGA 10 V_ATF5_01_M01295 TRANSFAC - 36277078 36277088 3.0E-06 TTTCTTCCTTT 11 V_FOXA2_04_M02749 TRANSFAC - 36273543 36273559 9.0E-06 TAAGAGTAAACAGTGTA 17 V_BCL6B_03_M02740 TRANSFAC - 36277113 36277128 3.0E-06 ACTGTCCAGGAATATG 16 V_EVI1_04_M00081 TRANSFAC - 36273658 36273672 6.0E-06 AAAAAAAAAAAAAAA 15 V_BCL6_01_M01183 TRANSFAC + 36273656 36273671 9.0E-06 TCTTTTTTTTTTTTTT 16 V_BCL6_01_M01183 TRANSFAC + 36273657 36273672 2.0E-06 CTTTTTTTTTTTTTTT 16 V_SATB1_Q3_M01723 TRANSFAC - 36276753 36276768 9.0E-06 ATTTTTAAAGACTTTT 16 V_CEBP_C_M00201 TRANSFAC + 36273531 36273548 1.0E-06 CGTGTTTTGAAATACACT 18 V_PU1_Q4_M01172 TRANSFAC - 36277075 36277093 6.0E-06 TTTTTTTTCTTCCTTTTCA 19 V_PU1_Q4_M01172 TRANSFAC - 36277078 36277096 3.0E-06 ACATTTTTTTTCTTCCTTT 19 V_AP4_Q6_01_M00927 TRANSFAC - 36276991 36276999 1.0E-05 AACAGCTGC 9 V_TCFAP2E_04_M02926 TRANSFAC - 36273656 36273669 6.0E-06 AAAAAAAAAAAAGA 14 V_TCFAP2E_04_M02926 TRANSFAC - 36273657 36273670 4.0E-06 AAAAAAAAAAAAAG 14 V_TCFAP2E_04_M02926 TRANSFAC - 36273658 36273671 1.0E-06 AAAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 36273659 36273672 1.0E-06 AAAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 36273660 36273673 2.0E-06 CAAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 36273661 36273674 3.0E-06 TCAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 36273662 36273675 2.0E-06 CTCAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 36273664 36273677 2.0E-06 GTCTCAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 36277077 36277090 1.0E-05 AAAAGGAAGAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 36277080 36277093 7.0E-06 AGGAAGAAAAAAAA 14 V_CEBPB_01_M00109 TRANSFAC + 36273532 36273545 7.0E-06 GTGTTTTGAAATAC 14 V_BCL6_02_M01185 TRANSFAC - 36277116 36277129 5.0E-06 TACTGTCCAGGAAT 14 V_ELF4_04_M02850 TRANSFAC - 36273658 36273674 2.0E-06 TCAAAAAAAAAAAAAAA 17 V_ELF4_04_M02850 TRANSFAC - 36273659 36273675 3.0E-06 CTCAAAAAAAAAAAAAA 17 V_ELF4_04_M02850 TRANSFAC - 36273660 36273676 0.0E+00 TCTCAAAAAAAAAAAAA 17 V_ELF4_04_M02850 TRANSFAC - 36273661 36273677 1.0E-06 GTCTCAAAAAAAAAAAA 17 V_ZFP105_03_M02827 TRANSFAC - 36273655 36273669 0.0E+00 AAAAAAAAAAAAGAG 15 V_ZFP105_03_M02827 TRANSFAC - 36273656 36273670 1.0E-06 AAAAAAAAAAAAAGA 15 V_ZFP105_03_M02827 TRANSFAC - 36273657 36273671 0.0E+00 AAAAAAAAAAAAAAG 15 V_ZFP105_03_M02827 TRANSFAC - 36273658 36273672 0.0E+00 AAAAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC - 36273659 36273673 1.0E-06 CAAAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC - 36273660 36273674 2.0E-06 TCAAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC - 36273661 36273675 1.0E-06 CTCAAAAAAAAAAAA 15 V_POLY_C_M00212 TRANSFAC + 36276858 36276875 7.0E-06 TAATAAAGCTCTATTGAA 18 V_HNF3A_01_M01261 TRANSFAC - 36273547 36273556 7.0E-06 GAGTAAACAG 10 V_HNF3_Q6_M00791 TRANSFAC - 36273546 36273558 5.0E-06 AAGAGTAAACAGT 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC + 36273548 36273558 8.0E-06 TGTTTACTCTT 11 V_TATA_C_M00216 TRANSFAC + 36276758 36276767 3.0E-06 TCTTTAAAAA 10 V_TEF_01_M01305 TRANSFAC + 36277551 36277562 3.0E-06 CACATTCCACTC 12 V_MTF1_06_M02882 TRANSFAC - 36273656 36273669 3.0E-06 AAAAAAAAAAAAGA 14 V_MTF1_06_M02882 TRANSFAC - 36273657 36273670 1.0E-06 AAAAAAAAAAAAAG 14 V_MTF1_06_M02882 TRANSFAC - 36273658 36273671 1.0E-06 AAAAAAAAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC - 36273659 36273672 1.0E-06 AAAAAAAAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC - 36273660 36273673 8.0E-06 CAAAAAAAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC + 36277079 36277092 8.0E-06 AAGGAAGAAAAAAA 14 V_HAND1E47_01_M00222 TRANSFAC - 36277043 36277058 4.0E-06 GATTTAGTCTGGAATT 16 V_FAC1_01_M00456 TRANSFAC - 36273658 36273671 3.0E-06 AAAAAAAAAAAAAA 14 V_FAC1_01_M00456 TRANSFAC - 36273659 36273672 3.0E-06 AAAAAAAAAAAAAA 14 V_TAL1_01_M01591 TRANSFAC - 36276703 36276715 5.0E-06 CTTGCTTCTCAGT 13 V_OSR2_04_M02889 TRANSFAC - 36276708 36276723 5.0E-06 GGCTGCTACTTGCTTC 16 V_TEF1_Q6_03_M01817 TRANSFAC - 36277552 36277560 6.0E-06 GTGGAATGT 9 V_FOXA2_03_M02260 TRANSFAC + 36273548 36273559 5.0E-06 TGTTTACTCTTA 12 V_PBX1_02_M00124 TRANSFAC - 36276764 36276778 1.0E-06 CAAATCCATCATTTT 15 V_MYF6_03_M02781 TRANSFAC + 36276986 36277001 7.0E-06 GCAGAGCAGCTGTTTT 16 V_MYF6_03_M02781 TRANSFAC - 36276988 36277003 8.0E-06 AGAAAACAGCTGCTCT 16 V_SRF_06_M02916 TRANSFAC - 36273654 36273670 1.0E-06 AAAAAAAAAAAAAGAGT 17 V_SRF_06_M02916 TRANSFAC - 36273655 36273671 1.0E-06 AAAAAAAAAAAAAAGAG 17 V_SRF_06_M02916 TRANSFAC - 36273656 36273672 0.0E+00 AAAAAAAAAAAAAAAGA 17 V_SRF_06_M02916 TRANSFAC - 36273657 36273673 0.0E+00 CAAAAAAAAAAAAAAAG 17 V_SRF_06_M02916 TRANSFAC - 36273658 36273674 0.0E+00 TCAAAAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC - 36273659 36273675 0.0E+00 CTCAAAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC - 36273660 36273676 0.0E+00 TCTCAAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC - 36273661 36273677 2.0E-06 GTCTCAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC + 36277080 36277096 8.0E-06 AGGAAGAAAAAAAATGT 17 V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC + 36276968 36276975 1.0E-05 TGTGGTTT 8 V_HOXB3_01_M01330 TRANSFAC + 36276975 36276991 9.0E-06 TGAAATAATGAGCAGAG 17 V_SOX1_03_M02802 TRANSFAC - 36276866 36276881 9.0E-06 TCGGAATTCAATAGAG 16 V_HOMEZ_01_M01429 TRANSFAC - 36276760 36276776 5.0E-06 AATCCATCATTTTTAAA 17 V_HOMEZ_01_M01429 TRANSFAC + 36276774 36276790 9.0E-06 ATTTGATAGATTTAAAA 17 V_PBX1_04_M01357 TRANSFAC - 36276761 36276777 5.0E-06 AAATCCATCATTTTTAA 17 V_TCF3_05_M02920 TRANSFAC - 36273662 36273676 4.0E-06 TCTCAAAAAAAAAAA 15 V_TCF3_05_M02920 TRANSFAC + 36277079 36277093 8.0E-06 AAGGAAGAAAAAAAA 15 V_NANOG_02_M01247 TRANSFAC - 36273655 36273674 7.0E-06 TCAAAAAAAAAAAAAAAGAG 20 V_NANOG_02_M01247 TRANSFAC + 36277076 36277095 8.0E-06 GAAAAGGAAGAAAAAAAATG 20

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.