Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

TOMM6 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 100188893 translocase of outer mitochondrial membrane 6 homolog (yeast) chr6 + 41750180 - 41755680 41755180 Transcription Factor Binding Sites   Download all TFBS in the TOMM6 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR - 41754328 41754346 5.0E-06 CCTCCACCAGAGGGCGTCC 19 GABPA_MA0062.2 JASPAR + 41755352 41755362 3.0E-06 CCGGAAGTGCC 11 VSX1_homeodomain_full_monomeric_11_1 SELEX + 41755162 41755172 5.0E-06 AGCCAATTAAA 11 SPIC_ETS_full_monomeric_14_1 SELEX - 41755610 41755623 2.0E-06 AGAAAGGGGAAATA 14 SOX9_HMG_full_dimeric_16_1 SELEX - 41756947 41756962 6.0E-06 AACAATGTGTTTTATT 16 ELF4_ETS_full_monomeric_12_1 SELEX + 41755349 41755360 9.0E-06 CAGCCGGAAGTG 12 STAT1_MA0137.2 JASPAR + 41756961 41756975 3.0E-06 TTTTTCCAGGAACTT 15 MSX1_homeodomain_full_monomeric_8_1 SELEX + 41755164 41755171 7.0E-06 CCAATTAA 8 Barhl1_homeodomain_DBD_monomeric_10_1 SELEX + 41755167 41755176 7.0E-06 ATTAAATGAT 10 SPIB_ETS_DBD_monomeric_14_1 SELEX - 41755610 41755623 5.0E-06 AGAAAGGGGAAATA 14 MSX2_homeodomain_DBD_monomeric_8_1 SELEX + 41755164 41755171 7.0E-06 CCAATTAA 8 Egr1_C2H2_mouse-DBD_mutant_DBD_monomeric_16_1 SELEX - 41754888 41754903 8.0E-06 TTCCTCCCACTCACAT 16 Ar_MA0007.1 JASPAR - 41755019 41755040 4.0E-06 CTTAGAACGCGCAGTACTGAAG 22 ELF3_ETS_full_monomeric_13_1 SELEX + 41755349 41755361 8.0E-06 CAGCCGGAAGTGC 13 HOXD13_homeodomain_DBD_monomeric_10_1 SELEX + 41755164 41755173 9.0E-06 CCAATTAAAT 10 RAX_homeodomain_DBD_monomeric_10_1 SELEX + 41755163 41755172 8.0E-06 GCCAATTAAA 10 BARHL2_homeodomain_full_monomeric_10_1 SELEX + 41755167 41755176 5.0E-06 ATTAAATGAT 10 CTCF_C2H2_full_monomeric_17_1 SELEX + 41754329 41754345 3.0E-06 GACGCCCTCTGGTGGAG 17 SOX7_HMG_full_dimeric_16_1 SELEX - 41756947 41756962 1.0E-06 AACAATGTGTTTTATT 16 BSX_homeodomain_DBD_monomeric_8_1 SELEX + 41755164 41755171 7.0E-06 CCAATTAA 8 TEAD3_TEA_DBD_dimeric_17_1 SELEX - 41757144 41757160 2.0E-06 ACATTTCATGAATACTT 17 POU1F1_POU_DBD_monomeric_17_1 SELEX - 41757140 41757156 3.0E-06 TTCATGAATACTTGACA 17 Stat3_MA0144.1 JASPAR - 41756963 41756972 4.0E-06 TTCCTGGAAA 10 Msx3_homeodomain_DBD_monomeric_8_1 SELEX + 41755164 41755171 7.0E-06 CCAATTAA 8 EHF_ETS_full_monomeric_12_1 SELEX + 41755349 41755360 7.0E-06 CAGCCGGAAGTG 12 Pou5f1_MA0142.1 JASPAR - 41757157 41757171 9.0E-06 CATTCTTTTGTACAT 15 TEAD1_TEA_full_dimeric_17_1 SELEX - 41757144 41757160 1.0E-06 ACATTTCATGAATACTT 17 GABPA_ETS_full_monomeric_10_1 SELEX + 41755351 41755360 9.0E-06 GCCGGAAGTG 10 ELF3_ETS_DBD_monomeric_12_1 SELEX + 41755349 41755360 7.0E-06 CAGCCGGAAGTG 12 HMX2_homeodomain_DBD_monomeric_11_1 SELEX + 41755163 41755173 6.0E-06 GCCAATTAAAT 11 LBX2_homeodomain_DBD_monomeric_10_1 SELEX + 41755163 41755172 6.0E-06 GCCAATTAAA 10 IRF3_IRF_full_trimeric_21_1 SELEX - 41752511 41752531 0.0E+00 AGGAAATGGAAAAGGAAAGGA 21 IRF3_IRF_full_trimeric_21_1 SELEX - 41752517 41752537 5.0E-06 TAGAAGAGGAAATGGAAAAGG 21 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX + 41755163 41755173 1.0E-05 GCCAATTAAAT 11 IRF2_MA0051.1 JASPAR - 41752507 41752524 9.0E-06 GGAAAAGGAAAGGAGCTC 18 HMX1_homeodomain_DBD_monomeric_11_1 SELEX + 41755163 41755173 1.0E-05 GCCAATTAAAT 11 V_OBOX6_01_M01445 TRANSFAC - 41755600 41755614 7.0E-06 AAATACGGATTTAAG 15 V_SPI1_01_M01203 TRANSFAC - 41755607 41755623 5.0E-06 AGAAAGGGGAAATACGG 17 V_STAT5A_Q6_M01890 TRANSFAC + 41756960 41756972 4.0E-06 GTTTTTCCAGGAA 13 V_MSX3_01_M01341 TRANSFAC + 41755159 41755174 7.0E-06 CCAAGCCAATTAAATG 16 V_ALX4_01_M00619 TRANSFAC - 41754767 41754779 4.0E-06 CCTAAGAAAAATC 13 V_BCL6B_03_M02740 TRANSFAC + 41756961 41756976 1.0E-06 TTTTTCCAGGAACTTG 16 V_OBOX1_01_M01450 TRANSFAC + 41757219 41757235 6.0E-06 TGAAAGGGATTTAAGTA 17 V_ERR3_Q2_01_M02094 TRANSFAC - 41757028 41757040 8.0E-06 GGTCAATGTCACT 13 V_DEAF1_02_M01002 TRANSFAC - 41755553 41755577 2.0E-06 TCGGGCTCGGTTACCTCCGGAAGTC 25 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC - 41754694 41754705 5.0E-06 AATAGTCTCCAG 12 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC + 41757156 41757167 6.0E-06 AATGTACAAAAG 12 V_DEAF1_01_M01001 TRANSFAC - 41755482 41755506 5.0E-06 ACGTTGTCCGGTATTTCGGGAGTTT 25 V_DEAF1_01_M01001 TRANSFAC - 41755553 41755577 4.0E-06 TCGGGCTCGGTTACCTCCGGAAGTC 25 V_POU5F1_02_M02245 TRANSFAC - 41757157 41757171 9.0E-06 CATTCTTTTGTACAT 15 V_GABP_B_M00341 TRANSFAC + 41755351 41755362 6.0E-06 GCCGGAAGTGCC 12 V_IRF2_Q6_M01882 TRANSFAC - 41752510 41752525 6.0E-06 TGGAAAAGGAAAGGAG 16 V_STAT5B_01_M00459 TRANSFAC + 41756961 41756975 1.0E-06 TTTTTCCAGGAACTT 15 V_STAT5B_01_M00459 TRANSFAC - 41756961 41756975 4.0E-06 AAGTTCCTGGAAAAA 15 V_GKLF_02_M01588 TRANSFAC - 41754401 41754412 5.0E-06 GCCCCGCCCAGC 12 V_COUPTF_Q6_M01036 TRANSFAC + 41754540 41754562 7.0E-06 CTCGGTGAACTCTGCAACCCTCT 23 V_PU1_Q4_M01172 TRANSFAC + 41752518 41752536 0.0E+00 CTTTTCCATTTCCTCTTCT 19 V_PU1_Q4_M01172 TRANSFAC + 41755604 41755622 1.0E-06 AATCCGTATTTCCCCTTTC 19 V_STAT4_Q4_M01666 TRANSFAC - 41756959 41756972 9.0E-06 TTCCTGGAAAAACA 14 V_BCL6_02_M01185 TRANSFAC + 41752498 41752511 3.0E-06 GGCTTTCTTGAGCT 14 RXRA_VDR_MA0074.1 JASPAR - 41754545 41754559 1.0E-06 GGGTTGCAGAGTTCA 15 V_SOX7_03_M02807 TRANSFAC - 41756948 41756969 2.0E-06 CTGGAAAAACAATGTGTTTTAT 22 V_CEBPE_Q6_M01868 TRANSFAC - 41757124 41757137 7.0E-06 AAACATTGCTTCAC 14 V_BEL1_B_M00312 TRANSFAC - 41753978 41754005 1.0E-06 AAGCAGCTGGGGCAGCAGGGGCTTCCCC 28 V_HOXB13_01_M01467 TRANSFAC + 41755161 41755176 3.0E-06 AAGCCAATTAAATGAT 16 V_ZFP410_03_M02832 TRANSFAC + 41757165 41757181 5.0E-06 AAGAATGTGATGTAAAA 17 V_SOX8_04_M02912 TRANSFAC + 41757146 41757159 1.0E-06 GTATTCATGAAATG 14 V_NKX61_01_M00424 TRANSFAC - 41755162 41755174 1.0E-06 CATTTAATTGGCT 13 V_CEBPD_Q6_M00621 TRANSFAC - 41757123 41757134 5.0E-06 CATTGCTTCACC 12 V_PXRRXR_02_M01153 TRANSFAC - 41754545 41754552 1.0E-05 AGAGTTCA 8 V_ER81_02_M02065 TRANSFAC + 41755351 41755360 1.0E-05 GCCGGAAGTG 10 V_MAZ_Q6_01_M02023 TRANSFAC + 41754894 41754907 0.0E+00 GTGGGAGGAAAGGG 14 V_MAZ_Q6_01_M02023 TRANSFAC - 41755254 41755267 3.0E-06 CTAGGAGGGGAGGA 14 V_NKX52_01_M01315 TRANSFAC + 41755160 41755176 2.0E-06 CAAGCCAATTAAATGAT 17 V_GADP_01_M01258 TRANSFAC - 41755349 41755360 1.0E-06 CACTTCCGGCTG 12 V_SOX12_04_M02900 TRANSFAC + 41757155 41757170 6.0E-06 AAATGTACAAAAGAAT 16 V_PBX1_05_M01967 TRANSFAC + 41757024 41757037 1.0E-06 CTTGAGTGACATTG 14 V_ELK1_02_M00025 TRANSFAC + 41755348 41755361 7.0E-06 GCAGCCGGAAGTGC 14 V_RFX_Q6_M00975 TRANSFAC + 41753925 41753933 4.0E-06 CTGTTGCCA 9 V_CTCF_02_M01259 TRANSFAC - 41754330 41754349 6.0E-06 CCGCCTCCACCAGAGGGCGT 20 V_STAT3_03_M01595 TRANSFAC + 41756962 41756977 9.0E-06 TTTTCCAGGAACTTGA 16 V_CTCF_01_M01200 TRANSFAC - 41754328 41754347 7.0E-06 GCCTCCACCAGAGGGCGTCC 20 V_CETS1P54_03_M01078 TRANSFAC + 41755299 41755314 3.0E-06 TCTTCCGGATGTCGGA 16 V_ELF1_Q6_M00746 TRANSFAC - 41752525 41752536 0.0E+00 AGAAGAGGAAAT 12 V_ELF1_Q6_M00746 TRANSFAC - 41755611 41755622 7.0E-06 GAAAGGGGAAAT 12 V_GCNF_01_M00526 TRANSFAC - 41757028 41757045 3.0E-06 CATGAGGTCAATGTCACT 18 V_ZIC2_05_M02940 TRANSFAC - 41755090 41755104 3.0E-06 TATCTCAGCAGGGGA 15 V_TTF1_Q5_M02034 TRANSFAC - 41757138 41757151 6.0E-06 GAATACTTGACAGA 14 V_T3R_01_M00239 TRANSFAC - 41757031 41757046 9.0E-06 CCATGAGGTCAATGTC 16 V_EHF_06_M02745 TRANSFAC + 41755347 41755361 8.0E-06 AGCAGCCGGAAGTGC 15 V_LUN1_01_M00480 TRANSFAC + 41753994 41754010 6.0E-06 CCCCAGCTGCTTCGAGA 17 V_EBNA1_01_M01745 TRANSFAC + 41753980 41753995 8.0E-06 GGAAGCCCCTGCTGCC 16 V_PITX1_01_M01484 TRANSFAC + 41757219 41757235 3.0E-06 TGAAAGGGATTTAAGTA 17 V_TCF1_06_M02815 TRANSFAC + 41756907 41756923 7.0E-06 ATTTCGTTAACTGTACA 17 V_MYB_Q5_01_M00913 TRANSFAC - 41755188 41755196 4.0E-06 TAACTGTCA 9 V_STAT1STAT1_Q3_M01212 TRANSFAC + 41756962 41756974 7.0E-06 TTTTCCAGGAACT 13 V_PBX1_03_M01017 TRANSFAC - 41752455 41752466 6.0E-06 TCATCAATCAGG 12 V_T3RBETA_Q6_01_M02119 TRANSFAC - 41757035 41757051 4.0E-06 AGGTGCCATGAGGTCAA 17 V_ZFP281_01_M01597 TRANSFAC - 41755107 41755117 9.0E-06 TGGGGGTAGGG 11 V_P63_01_M01656 TRANSFAC - 41752442 41752461 9.0E-06 AATCAGGTCCTGACAGGCCC 20 V_STAT5A_01_M00457 TRANSFAC + 41756961 41756975 2.0E-06 TTTTTCCAGGAACTT 15 V_STAT5A_01_M00457 TRANSFAC - 41756961 41756975 7.0E-06 AAGTTCCTGGAAAAA 15 V_PUR1_Q4_M01721 TRANSFAC - 41755447 41755455 6.0E-06 GGGACAGTG 9 V_SOX18_04_M02905 TRANSFAC + 41756977 41756992 7.0E-06 ATACTAAATTTGGGAC 16 V_SOX2_Q6_M01272 TRANSFAC + 41756951 41756966 0.0E+00 AAACACATTGTTTTTC 16 V_BSX_01_M01442 TRANSFAC + 41755161 41755176 4.0E-06 AAGCCAATTAAATGAT 16 V_SRY_05_M02917 TRANSFAC - 41756952 41756968 1.0E-05 TGGAAAAACAATGTGTT 17 V_LHX4_01_M01421 TRANSFAC - 41755159 41755175 6.0E-06 TCATTTAATTGGCTTGG 17 V_MYCMAX_03_M00615 TRANSFAC + 41756817 41756836 5.0E-06 AAATTCCCACGTGGGTCTTG 20 V_MYCMAX_03_M00615 TRANSFAC - 41756817 41756836 5.0E-06 CAAGACCCACGTGGGAATTT 20 V_UF1H3BETA_Q6_M01068 TRANSFAC - 41755106 41755119 5.0E-06 GGTGGGGGTAGGGG 14 V_LHX5_01_M01353 TRANSFAC + 41755160 41755176 7.0E-06 CAAGCCAATTAAATGAT 17 V_HOXA10_01_M01464 TRANSFAC + 41755161 41755176 5.0E-06 AAGCCAATTAAATGAT 16 V_HMX3_02_M01413 TRANSFAC + 41755160 41755176 5.0E-06 CAAGCCAATTAAATGAT 17 V_HOXD10_01_M01375 TRANSFAC + 41755161 41755177 1.0E-06 AAGCCAATTAAATGATC 17 V_OBOX6_02_M03068 TRANSFAC - 41755600 41755614 7.0E-06 AAATACGGATTTAAG 15 V_BRCA_01_M01082 TRANSFAC + 41753923 41753930 1.0E-05 TTCTGTTG 8 V_STAT1_05_M01260 TRANSFAC - 41756954 41756975 4.0E-06 AAGTTCCTGGAAAAACAATGTG 22 V_STAT1_05_M01260 TRANSFAC + 41756961 41756982 6.0E-06 TTTTTCCAGGAACTTGATACTA 22 V_VDRRXR_01_M01202 TRANSFAC - 41754545 41754559 1.0E-06 GGGTTGCAGAGTTCA 15 V_AR_Q2_M00447 TRANSFAC - 41755023 41755037 6.0E-06 AGAACGCGCAGTACT 15 V_SPI1_02_M02043 TRANSFAC - 41755610 41755619 8.0E-06 AGGGGAAATA 10 V_ZIC1_05_M02939 TRANSFAC - 41755090 41755104 5.0E-06 TATCTCAGCAGGGGA 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.