Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

KRTAP4-9


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
100132386 keratin associated protein 4-9 chr17 +39256640 - 39262140 39261640

Transcription Factor Binding Sites

 
Download all TFBS in the KRTAP4-9 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
SRF_MADS_DBD_dimeric_12_1 SELEX + 39264450 39264461 3.0E-06 TCCTTATAAGGA 12
SRF_MADS_DBD_dimeric_12_1 SELEX - 39264450 39264461 3.0E-06 TCCTTATAAGGA 12
SOX9_HMG_full_dimeric_17_3 SELEX - 39264375 39264391 9.0E-06 AATGAACTTTAGTTCTT 17
CUX1_CUT_DBD_dimeric_17_1 SELEX + 39260908 39260924 6.0E-06 ATCAAAGGTAAATCAAA 17
SCRT2_C2H2_DBD_monomeric_13_1 SELEX - 39261855 39261867 1.0E-06 CTGCAACAGGTGG 13
SRF_MA0083.1 JASPAR + 39264449 39264460 7.0E-06 TTCCTTATAAGG 12
SRF_MA0083.1 JASPAR - 39264451 39264462 7.0E-06 TTCCTTATAAGG 12
LEF1_HMG_DBD_monomeric_15_1 SELEX + 39260904 39260918 2.0E-06 GATGATCAAAGGTAA 15
FIGLA_bHLH_DBD_dimeric_10_1 SELEX + 39261854 39261863 1.0E-06 ACCACCTGTT 10
Tcf7_HMG_DBD_monomeric_12_1 SELEX + 39260904 39260915 4.0E-06 GATGATCAAAGG 12
SCRT1_C2H2_DBD_monomeric_15_1 SELEX - 39261853 39261867 0.0E+00 CTGCAACAGGTGGTC 15
PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX - 39264471 39264485 4.0E-06 AGGAAGTAAAAGTAA 15
FEV_MA0156.1 JASPAR - 39264502 39264509 1.0E-05 CAGGAAAT 8
Pou5f1_MA0142.1 JASPAR - 39263458 39263472 1.0E-06 CTTTCAGATTCAAAT 15
FOXI1_forkhead_full_dimeric_17_1 SELEX + 39260852 39260868 4.0E-06 TTGTTTACATATAACAA 17
ELF5_MA0136.1 JASPAR + 39261052 39261060 9.0E-06 AACTTCCTT 9
ELF5_MA0136.1 JASPAR + 39264478 39264486 4.0E-06 TACTTCCTT 9
V_SRF_Q6_M00186 TRANSFAC + 39264449 39264462 3.0E-06 TTCCTTATAAGGAA 14
V_SRF_Q6_M00186 TRANSFAC - 39264449 39264462 3.0E-06 TTCCTTATAAGGAA 14
V_LEF1_04_M02774 TRANSFAC - 39260903 39260919 4.0E-06 TTTACCTTTGATCATCA 17
V_MYOD_Q6_M00184 TRANSFAC + 39261854 39261863 7.0E-06 ACCACCTGTT 10
V_SOX40_04_M02908 TRANSFAC + 39261218 39261233 1.0E-05 TCACATTATAAAAATT 16
V_SRY_07_M02813 TRANSFAC + 39261218 39261233 7.0E-06 TCACATTATAAAAATT 16
V_SRY_07_M02813 TRANSFAC - 39261218 39261233 9.0E-06 AATTTTTATAATGTGA 16
V_HMGIY_Q3_M01010 TRANSFAC + 39264384 39264398 1.0E-05 AGTTCATTTTGCTGT 15
V_SPIB_02_M02041 TRANSFAC - 39264478 39264487 4.0E-06 AAAGGAAGTA 10
V_POU5F1_02_M02245 TRANSFAC - 39263458 39263472 1.0E-06 CTTTCAGATTCAAAT 15
V_IRF2_Q6_M01882 TRANSFAC - 39264471 39264486 7.0E-06 AAGGAAGTAAAAGTAA 16
V_NFAT3_Q3_M01734 TRANSFAC + 39264574 39264583 6.0E-06 TTTTTTTCCT 10
V_NERF_Q2_M00531 TRANSFAC - 39261940 39261957 6.0E-06 CGACAGCAAGTGGGTTGG 18
V_E2A_Q2_M00804 TRANSFAC + 39261855 39261868 1.0E-06 CCACCTGTTGCAGG 14
V_AP4_Q6_02_M01860 TRANSFAC + 39261840 39261852 2.0E-06 CCAGCTGCTGTCA 13
V_PU1_Q4_M01172 TRANSFAC + 39264472 39264490 3.0E-06 TACTTTTACTTCCTTTACA 19
V_SOX21_03_M02803 TRANSFAC + 39261218 39261233 4.0E-06 TCACATTATAAAAATT 16
V_TCFAP2E_04_M02926 TRANSFAC - 39264573 39264586 7.0E-06 AGCAGGAAAAAAAC 14
V_CDP_04_M01344 TRANSFAC + 39260900 39260914 7.0E-06 TTTTGATGATCAAAG 15
V_SPIC_01_M02042 TRANSFAC - 39264478 39264487 4.0E-06 AAAGGAAGTA 10
V_TAL1_Q6_M00993 TRANSFAC - 39258197 39258206 3.0E-06 TCCAGCTGCT 10
V_TAL1_Q6_M00993 TRANSFAC - 39258317 39258326 3.0E-06 TCCAGCTGCT 10
V_TAL1_Q6_M00993 TRANSFAC + 39261899 39261908 3.0E-06 TCCAGCTGCT 10
V_SOX13_03_M02797 TRANSFAC - 39261226 39261241 8.0E-06 TGGGGGACAATTTTTA 16
V_SOX7_03_M02807 TRANSFAC + 39260857 39260878 8.0E-06 TACATATAACAAATGCTTTTGT 22
V_TCF3_04_M02816 TRANSFAC + 39260903 39260919 2.0E-06 TGATGATCAAAGGTAAA 17
V_FOXA2_02_M02853 TRANSFAC + 39260858 39260872 1.0E-06 ACATATAACAAATGC 15
V_HOXB13_01_M01467 TRANSFAC + 39261219 39261234 8.0E-06 CACATTATAAAAATTG 16
V_GFI1_01_M00250 TRANSFAC + 39260910 39260933 5.0E-06 CAAAGGTAAATCAAAACTTCCTAC 24
V_IRF3_Q3_M01279 TRANSFAC + 39264471 39264483 9.0E-06 TTACTTTTACTTC 13
V_ASCL2_03_M02737 TRANSFAC + 39258116 39258132 3.0E-06 GGCAGCAGCTGCTGGAG 17
V_ASCL2_03_M02737 TRANSFAC - 39258328 39258344 4.0E-06 TCCCACAGCTGCTCTGT 17
V_ELF5_01_M01197 TRANSFAC - 39261052 39261062 1.0E-05 TCAAGGAAGTT 11
V_ELF5_01_M01197 TRANSFAC - 39264478 39264488 1.0E-06 TAAAGGAAGTA 11
V_CUX1_04_M02959 TRANSFAC + 39260900 39260914 7.0E-06 TTTTGATGATCAAAG 15
V_OCT1_04_M00138 TRANSFAC + 39260873 39260895 3.0E-06 TTTTGTCAATGAAAATCCATCAT 23
V_TCF7_03_M02817 TRANSFAC + 39260903 39260919 2.0E-06 TGATGATCAAAGGTAAA 17
V_HNF4A_Q6_01_M02016 TRANSFAC + 39260907 39260921 4.0E-06 GATCAAAGGTAAATC 15
V_TBP_06_M02814 TRANSFAC + 39261218 39261233 9.0E-06 TCACATTATAAAAATT 16
V_TBP_06_M02814 TRANSFAC + 39261220 39261235 9.0E-06 ACATTATAAAAATTGT 16
V_TBP_06_M02814 TRANSFAC - 39261220 39261235 6.0E-06 ACAATTTTTATAATGT 16
V_OCT4_02_M01124 TRANSFAC + 39261216 39261230 2.0E-06 ATTCACATTATAAAA 15
V_OCT4_02_M01124 TRANSFAC - 39263457 39263471 1.0E-06 TTTCAGATTCAAATG 15
V_SRF_03_M01304 TRANSFAC + 39264449 39264461 8.0E-06 TTCCTTATAAGGA 13
V_SRF_03_M01304 TRANSFAC - 39264450 39264462 8.0E-06 TTCCTTATAAGGA 13
V_NEUROD_02_M01288 TRANSFAC - 39258208 39258219 5.0E-06 CAGCTGCTGTGT 12
V_ZIC2_05_M02940 TRANSFAC + 39264547 39264561 4.0E-06 ACTCCCAGCAGGGAA 15
V_TAL1ALPHAE47_01_M00066 TRANSFAC - 39261851 39261866 1.0E-05 TGCAACAGGTGGTCTG 16
V_HEN1_02_M00058 TRANSFAC + 39258113 39258134 5.0E-06 AGGGGCAGCAGCTGCTGGAGAT 22
V_HEN1_02_M00058 TRANSFAC - 39258113 39258134 8.0E-06 ATCTCCAGCAGCTGCTGCCCCT 22
V_STAT6_02_M00500 TRANSFAC + 39264501 39264508 1.0E-05 GATTTCCT 8
V_PLZF_02_M01075 TRANSFAC + 39264369 39264397 2.0E-06 TTGGTGAAGAACTAAAGTTCATTTTGCTG 29
V_PLZF_02_M01075 TRANSFAC - 39264463 39264491 2.0E-06 TTGTAAAGGAAGTAAAAGTAAATCTTGCC 29
V_OSR1_04_M02888 TRANSFAC - 39261083 39261098 8.0E-06 GTATGCTTCTTGAATA 16
V_LEF1TCF1_Q4_M00978 TRANSFAC - 39260905 39260915 3.0E-06 CCTTTGATCAT 11
V_SRF_02_M01257 TRANSFAC - 39264445 39264462 2.0E-06 TTCCTTATAAGGAAGGCA 18
V_SRF_02_M01257 TRANSFAC + 39264449 39264466 2.0E-06 TTCCTTATAAGGAAGGCA 18
V_DMRT2_01_M01147 TRANSFAC - 39260389 39260404 8.0E-06 ATAAAGAATACAATTT 16
V_PIT1_Q6_M00802 TRANSFAC - 39263459 39263476 3.0E-06 TATTCTTTCAGATTCAAA 18
V_SOX15_04_M02903 TRANSFAC + 39260877 39260891 3.0E-06 GTCAATGAAAATCCA 15
V_ELF5_04_M02241 TRANSFAC + 39261052 39261060 9.0E-06 AACTTCCTT 9
V_ELF5_04_M02241 TRANSFAC + 39264478 39264486 4.0E-06 TACTTCCTT 9
V_MAFK_04_M02880 TRANSFAC - 39260892 39260906 5.0E-06 ATCAAAACTGCATGA 15
V_FEV_01_M02269 TRANSFAC - 39264502 39264509 1.0E-05 CAGGAAAT 8
V_PAX4_04_M00380 TRANSFAC - 39261026 39261055 1.0E-05 AGTTATAAACTCTGTGTCAGATCTCATTCC 30
V_SPI1_02_M02043 TRANSFAC - 39264478 39264487 3.0E-06 AAAGGAAGTA 10
V_NANOG_02_M01247 TRANSFAC - 39260867 39260886 5.0E-06 TTTCATTGACAAAAGCATTT 20
V_NANOG_02_M01247 TRANSFAC + 39260901 39260920 4.0E-06 TTTGATGATCAAAGGTAAAT 20
V_OCT4_01_M01125 TRANSFAC - 39263458 39263472 2.0E-06 CTTTCAGATTCAAAT 15
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL