Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

KRTAP25-1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 100131902 keratin associated protein 25-1 chr21 - 31661332 - 31666832 31661832 Transcription Factor Binding Sites   Download all TFBS in the KRTAP25-1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SOX10_HMG_full_dimeric_16_1 SELEX + 31661692 31661707 5.0E-06 CACAAAATTCAGTGAT 16 SOX8_HMG_DBD_dimeric_16_1 SELEX + 31661692 31661707 8.0E-06 CACAAAATTCAGTGAT 16 HNF1B_MA0153.1 JASPAR + 31661700 31661711 9.0E-06 TCAGTGATTGAC 12 TBP_MA0108.2 JASPAR + 31661843 31661857 5.0E-06 ATATAAAAACAGCTA 15 SOX8_HMG_full_dimeric_17_1 SELEX + 31661309 31661325 3.0E-06 AATCGCTGGCAGTGAAA 17 SOX8_HMG_full_dimeric_17_1 SELEX + 31661692 31661708 8.0E-06 CACAAAATTCAGTGATT 17 Gfi_MA0038.1 JASPAR - 31661701 31661710 7.0E-06 TCAATCACTG 10 NFIX_NFI_full_monomeric_9_2 SELEX - 31661291 31661299 8.0E-06 TATGCCAAT 9 BCL6B_C2H2_DBD_monomeric_17_1 SELEX - 31661884 31661900 7.0E-06 TGCTTTCTACTACTTAC 17 FOXC1_MA0032.1 JASPAR + 31661883 31661890 7.0E-06 AGTAAGTA 8 V_TCFAP2E_04_M02926 TRANSFAC + 31661774 31661787 6.0E-06 CTACTGAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 31661775 31661788 0.0E+00 TACTGAAAAAAAAG 14 V_TGIF2_01_M01407 TRANSFAC - 31661734 31661749 7.0E-06 TTATGGCTGTCAATCA 16 V_ELF4_04_M02850 TRANSFAC + 31661713 31661729 1.0E-05 GCGACAAAAAATAAAGC 17 V_TATA_01_M00252 TRANSFAC + 31661843 31661857 5.0E-06 ATATAAAAACAGCTA 15 V_HNF1B_04_M02266 TRANSFAC + 31661700 31661711 9.0E-06 TCAGTGATTGAC 12 V_OCT1_04_M00138 TRANSFAC - 31661284 31661306 5.0E-06 TGATTTCTATGCCAATAATATGT 23 V_OCT1_04_M00138 TRANSFAC + 31661831 31661853 2.0E-06 AAATAAGGATTGATATAAAAACA 23 V_PBX1_05_M01967 TRANSFAC + 31661702 31661715 0.0E+00 AGTGATTGACAGCG 14 V_PBX1_05_M01967 TRANSFAC + 31661732 31661745 2.0E-06 GGTGATTGACAGCC 14 V_CIZ_01_M00734 TRANSFAC + 31661717 31661725 6.0E-06 CAAAAAATA 9 V_MRG2_01_M01395 TRANSFAC - 31661734 31661749 4.0E-06 TTATGGCTGTCAATCA 16 V_PKNOX2_01_M01411 TRANSFAC - 31661734 31661749 7.0E-06 TTATGGCTGTCAATCA 16 V_CAAT_C_M00200 TRANSFAC - 31661843 31661867 1.0E-05 GCCACTCAACTAGCTGTTTTTATAT 25 V_GFI1B_01_M01058 TRANSFAC - 31661699 31661710 7.0E-06 TCAATCACTGAA 12 V_ERR1_Q2_M00511 TRANSFAC + 31661275 31661288 7.0E-06 TATTCAAGGACATA 14 V_ESRRA_03_M02748 TRANSFAC + 31661275 31661291 1.0E-06 TATTCAAGGACATATTA 17 V_PBX1_04_M01357 TRANSFAC - 31661834 31661850 1.0E-05 TTTTATATCAATCCTTA 17

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.