Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

NAT2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 10 N-acetyltransferase 2 (arylamine N-acetyltransferase) chr8 + 18243754 - 18249254 18248754 Transcription Factor Binding Sites   Download all TFBS in the NAT2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints Hoxd9_homeodomain_DBD_monomeric_10_1 SELEX - 18249437 18249446 4.0E-06 ACAATTAAAT 10 NFIA_NFI_full_dimeric_15_1 SELEX + 18247723 18247737 7.0E-06 GTGGCAGCATGCCAG 15 IRX2_homeodomain_DBD_dimeric_12_1 SELEX + 18249391 18249402 3.0E-06 CTACATGACATA 12 TBX1_TBX_DBD_dimeric_23_1 SELEX + 18249318 18249340 1.0E-06 TCTGACACCTTAAAAATCTGAAA 23 TBX1_TBX_DBD_dimeric_23_1 SELEX - 18249318 18249340 0.0E+00 TTTCAGATTTTTAAGGTGTCAGA 23 EWSR1-FLI1_MA0149.1 JASPAR - 18245404 18245421 5.0E-06 GGAGGGGAGGGGGGAATG 18 NFIX_NFI_full_dimeric_15_2 SELEX - 18247723 18247737 5.0E-06 CTGGCATGCTGCCAC 15 BARX1_homeodomain_DBD_monomeric_8_1 SELEX - 18249439 18249446 5.0E-06 ACAATTAA 8 Tcfap2a_TFAP_DBD_dimeric_13_1 SELEX + 18244808 18244820 2.0E-06 AGCCCCTAGGGCA 13 Tcfap2a_TFAP_DBD_dimeric_13_1 SELEX - 18244808 18244820 5.0E-06 TGCCCTAGGGGCT 13 TFAP2C_TFAP_full_dimeric_13_1 SELEX + 18244808 18244820 3.0E-06 AGCCCCTAGGGCA 13 TFAP2C_TFAP_full_dimeric_13_1 SELEX - 18244808 18244820 4.0E-06 TGCCCTAGGGGCT 13 LEF1_HMG_DBD_monomeric_15_1 SELEX + 18251597 18251611 4.0E-06 ATAGATAAAAGAAAA 15 ATF4_bZIP_DBD_dimeric_13_1 SELEX - 18247773 18247785 1.0E-05 TCATGATGTAATT 13 Tcf7_HMG_DBD_monomeric_12_1 SELEX + 18251597 18251608 9.0E-06 ATAGATAAAAGA 12 MZF1_5-13_MA0057.1 JASPAR + 18249259 18249268 1.0E-05 TTATGGGGAA 10 TFAP2A_TFAP_DBD_dimeric_13_1 SELEX + 18244808 18244820 1.0E-06 AGCCCCTAGGGCA 13 TFAP2A_TFAP_DBD_dimeric_13_1 SELEX - 18244808 18244820 8.0E-06 TGCCCTAGGGGCT 13 NFIL3_bZIP_DBD_dimeric_12_1 SELEX + 18247773 18247784 8.0E-06 AATTACATCATG 12 TEAD3_TEA_DBD_monomeric_8_1 SELEX - 18251768 18251775 1.0E-05 ACATTCCA 8 Nkx3-2_MA0122.1 JASPAR - 18245419 18245427 8.0E-06 CTAAGTGGA 9 Hoxd9_homeodomain_DBD_monomeric_9_1 SELEX - 18249257 18249265 2.0E-06 CCCATAAAA 9 TFAP2B_TFAP_DBD_dimeric_13_1 SELEX + 18244808 18244820 1.0E-06 AGCCCCTAGGGCA 13 TFAP2B_TFAP_DBD_dimeric_13_1 SELEX - 18244808 18244820 5.0E-06 TGCCCTAGGGGCT 13 TBX21_TBX_full_dimeric_19_1 SELEX + 18249320 18249338 3.0E-06 TGACACCTTAAAAATCTGA 19 TFAP2A_MA0003.1 JASPAR - 18244811 18244819 8.0E-06 GCCCTAGGG 9 Sox11_HMG_DBD_dimeric_15_1 SELEX + 18247770 18247784 1.0E-05 AACAATTACATCATG 15 FOXC1_MA0032.1 JASPAR + 18248855 18248862 7.0E-06 AGTAAGTA 8 Irx3_homeodomain_DBD_dimeric_12_1 SELEX + 18249391 18249402 0.0E+00 CTACATGACATA 12 HMX1_homeodomain_DBD_monomeric_11_1 SELEX - 18249437 18249447 8.0E-06 TACAATTAAAT 11 IRX5_homeodomain_DBD_dimeric_12_1 SELEX + 18249391 18249402 2.0E-06 CTACATGACATA 12 V_AP2ALPHA_01_M00469 TRANSFAC - 18244811 18244819 8.0E-06 GCCCTAGGG 9 V_GAF_Q6_M01209 TRANSFAC + 18251748 18251758 7.0E-06 CATTTTCCCAT 11 V_LEF1_04_M02774 TRANSFAC - 18251596 18251612 6.0E-06 CTTTTCTTTTATCTATC 17 V_TCFE2A_04_M02927 TRANSFAC - 18251792 18251808 7.0E-06 ACATCCAGATGGCCGGT 17 V_OSF2_Q6_M00731 TRANSFAC - 18251761 18251768 1.0E-05 ACCACAAA 8 V_CHOP_01_M00249 TRANSFAC - 18248817 18248829 1.0E-06 GAATGCAATCCTC 13 V_GATA2_02_M00348 TRANSFAC + 18251597 18251606 9.0E-06 ATAGATAAAA 10 TAL1_TCF3_MA0091.1 JASPAR + 18249349 18249360 3.0E-06 TTACCATCTGTT 12 TAL1_TCF3_MA0091.1 JASPAR - 18249351 18249362 8.0E-06 AAAACAGATGGT 12 V_ZEC_01_M01081 TRANSFAC + 18251620 18251632 8.0E-06 AAAGGGGGGTTGT 13 V_HMGIY_Q3_M01010 TRANSFAC - 18248871 18248885 3.0E-06 ACTGCAAATTACTTA 15 V_NFMUE1_Q6_M00651 TRANSFAC + 18251794 18251802 6.0E-06 CGGCCATCT 9 V_ATF3_Q6_01_M01863 TRANSFAC + 18247774 18247784 8.0E-06 ATTACATCATG 11 V_SPZ1_01_M00446 TRANSFAC - 18245402 18245416 3.0E-06 GGAGGGGGGAATGGA 15 V_DLX2_01_M01468 TRANSFAC + 18247768 18247783 1.0E-06 GCAACAATTACATCAT 16 V_TAL1_Q6_M00993 TRANSFAC + 18247667 18247676 8.0E-06 TCCATCTGCC 10 V_TCF3_04_M02816 TRANSFAC + 18251596 18251612 4.0E-06 GATAGATAAAAGAAAAG 17 V_E4BP4_01_M00045 TRANSFAC - 18247773 18247784 7.0E-06 CATGATGTAATT 12 V_SOX1_04_M02906 TRANSFAC - 18247766 18247780 6.0E-06 ATGTAATTGTTGCCT 15 V_NKX61_01_M00424 TRANSFAC + 18249436 18249448 6.0E-06 CATTTAATTGTAC 13 Ddit3_Cebpa_MA0019.1 JASPAR - 18248818 18248829 3.0E-06 GAATGCAATCCT 12 V_SOX18_03_M02801 TRANSFAC + 18249438 18249453 8.0E-06 TTTAATTGTACTGACC 16 V_TATA_C_M00216 TRANSFAC - 18249256 18249265 9.0E-06 CCCATAAAAG 10 V_HOX13_01_M00023 TRANSFAC - 18247809 18247838 1.0E-06 TTCTATGAGCTAAATTACTTTTAGATTCCA 30 V_OCT1_04_M00138 TRANSFAC - 18251584 18251606 8.0E-06 TTTTATCTATCCAAATCCTATAA 23 V_TAL1BETAE47_01_M00065 TRANSFAC - 18249348 18249363 1.0E-06 GAAAACAGATGGTAAA 16 V_TCF7_03_M02817 TRANSFAC + 18251596 18251612 2.0E-06 GATAGATAAAAGAAAAG 17 V_LHX3b_01_M01971 TRANSFAC + 18247819 18247828 5.0E-06 AAGTAATTTA 10 V_TAL1BETAITF2_01_M00070 TRANSFAC - 18249348 18249363 1.0E-06 GAAAACAGATGGTAAA 16 V_GATA4_Q3_M00632 TRANSFAC + 18251599 18251610 1.0E-06 AGATAAAAGAAA 12 V_VBP_01_M00228 TRANSFAC + 18247774 18247783 4.0E-06 ATTACATCAT 10 V_TAL1ALPHAE47_01_M00066 TRANSFAC - 18249348 18249363 1.0E-06 GAAAACAGATGGTAAA 16 V_GFI1B_01_M01058 TRANSFAC - 18249288 18249299 9.0E-06 TCAATCAGAGCA 12 V_TEF1_Q6_03_M01817 TRANSFAC + 18251767 18251775 6.0E-06 GTGGAATGT 9 V_ZFP281_01_M01597 TRANSFAC + 18244586 18244596 5.0E-06 TGGGGGAAGGG 11 V_ZFP281_04_M02831 TRANSFAC - 18244584 18244598 5.0E-06 CCCCCTTCCCCCACC 15 V_EWSR1FLI1_01_M02252 TRANSFAC - 18245404 18245421 5.0E-06 GGAGGGGAGGGGGGAATG 18 V_HLF_01_M00260 TRANSFAC + 18247774 18247783 6.0E-06 ATTACATCAT 10 V_YY1_01_M00059 TRANSFAC + 18249247 18249263 9.0E-06 CAAAACCATCTTTTATG 17 V_BSX_01_M01442 TRANSFAC + 18247768 18247783 6.0E-06 GCAACAATTACATCAT 16 V_PIT1_Q6_M00802 TRANSFAC - 18251594 18251611 8.0E-06 TTTTCTTTTATCTATCCA 18 V_CTF1_01_M01196 TRANSFAC + 18247724 18247737 1.0E-06 TGGCAGCATGCCAG 14 V_UF1H3BETA_Q6_M01068 TRANSFAC + 18244584 18244597 2.0E-06 GGTGGGGGAAGGGG 14 V_HOXA10_01_M01464 TRANSFAC - 18248789 18248804 3.0E-06 TCTGTAATAAAGTGCT 16 V_HOXD10_01_M01375 TRANSFAC - 18249433 18249449 2.0E-06 AGTACAATTAAATGCTT 17 TLX1_NFIC_MA0119.1 JASPAR + 18247724 18247737 1.0E-06 TGGCAGCATGCCAG 14 V_CEBPG_Q6_01_M01869 TRANSFAC - 18251748 18251759 9.0E-06 GATGGGAAAATG 12 V_PAX6_01_M00097 TRANSFAC - 18249425 18249445 6.0E-06 CAATTAAATGCTTGAGTTAAA 21 V_GATA1_06_M00347 TRANSFAC + 18251597 18251606 1.0E-06 ATAGATAAAA 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.